RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 A0A1W2PQY0 241 aa13.72□□□□□ -0.21
SF3B2-208ENST00000529994 COL9A1P20849 921 aa13.72□□□□□ -0.21
SF3B2-208ENST00000529994 DNAJB2P25686 324 aa13.72□□□□□ -0.21
SF3B2-208ENST00000529994 FPGSQ05932 587 aa13.72□□□□□ -0.21
SF3B2-208ENST00000529994 TJAP1Q5JTD0 557 aa13.72□□□□□ -0.21
SF3B2-208ENST00000529994 ABRAQ8N0Z2 381 aa13.72□□□□□ -0.21
SF3B2-208ENST00000529994 MB21D1Q8N884 522 aa13.72□□□□□ -0.21
SF3B2-208ENST00000529994 SDR42E1Q8WUS8 393 aa13.72□□□□□ -0.21
SF3B2-208ENST00000529994 BAZ2AQ9UIF9 1905 aaKnown RBP13.71□□□□□ -0.21
SF3B2-208ENST00000529994 TMEM265A0A087WTH1 108 aa13.71□□□□□ -0.21
SF3B2-208ENST00000529994 KIAA0355O15063 1070 aa13.71□□□□□ -0.21
SF3B2-208ENST00000529994 TMEM132BQ14DG7 1078 aa13.71□□□□□ -0.21
SF3B2-208ENST00000529994 RNF180Q86T96 592 aa13.71□□□□□ -0.21
SF3B2-208ENST00000529994 DYNLL2Q96FJ2 89 aa13.71□□□□□ -0.21
SF3B2-208ENST00000529994 MMP19Q99542 508 aa13.71□□□□□ -0.21
SF3B2-208ENST00000529994 ZNF576Q9H609 170 aa13.71□□□□□ -0.21
SF3B2-208ENST00000529994 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.7□□□□□ -0.22
SF3B2-208ENST00000529994 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.7□□□□□ -0.22
SF3B2-208ENST00000529994 TNFRSF10AO00220 468 aa13.7□□□□□ -0.22
SF3B2-208ENST00000529994 AKR1B1P15121 316 aa13.7□□□□□ -0.22
SF3B2-208ENST00000529994 FAAP100Q0VG06 881 aa13.7□□□□□ -0.22
SF3B2-208ENST00000529994 TMEM179Q6ZVK1 233 aa13.7□□□□□ -0.22
SF3B2-208ENST00000529994 AACSQ86V21 672 aa13.7□□□□□ -0.22
SF3B2-208ENST00000529994 SIAH1Q8IUQ4 282 aa13.7□□□□□ -0.22
SF3B2-208ENST00000529994 TIFAQ96CG3 184 aa13.7□□□□□ -0.22
SF3B2-208ENST00000529994 TINF2Q9BSI4 451 aa13.7□□□□□ -0.22
SF3B2-208ENST00000529994 CRNKL1Q9BZJ0 848 aaKnown RBP13.7□□□□□ -0.22
SF3B2-208ENST00000529994 ARHGEF10LQ9HCE6 1279 aa13.7□□□□□ -0.22
SF3B2-208ENST00000529994 FBXO28Q9NVF7 368 aa13.7□□□□□ -0.22
SF3B2-208ENST00000529994 NOP58Q9Y2X3 529 aaKnown RBP13.7□□□□□ -0.22
SF3B2-208ENST00000529994 GRXCR1A8MXD5 290 aa13.69□□□□□ -0.22
SF3B2-208ENST00000529994 SMIM22K7EJ46 135 aa13.69□□□□□ -0.22
SF3B2-208ENST00000529994 PDE6AP16499 860 aa13.69□□□□□ -0.22
SF3B2-208ENST00000529994 ICA1Q05084 483 aa13.69□□□□□ -0.22
SF3B2-208ENST00000529994 SLC9C2Q5TAH2 1124 aa13.69□□□□□ -0.22
SF3B2-208ENST00000529994 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.69□□□□□ -0.224e-19■■■□□ 15.2
SF3B2-208ENST00000529994 BCL11AQ9H165 835 aa13.69□□□□□ -0.22
SF3B2-208ENST00000529994 VCPKMTQ9H867 229 aa13.69□□□□□ -0.22
SF3B2-208ENST00000529994 DCP1AQ9NPI6 582 aaPredicted RBP13.69□□□□□ -0.22
SF3B2-208ENST00000529994 RCAN3Q9UKA8 241 aa13.69□□□□□ -0.22
SF3B2-208ENST00000529994 DCDC2CA8MYV0 355 aa13.68□□□□□ -0.22
SF3B2-208ENST00000529994 RAD21O60216 631 aa13.68□□□□□ -0.22
SF3B2-208ENST00000529994 ADAMTS4O75173 837 aa13.68□□□□□ -0.22
SF3B2-208ENST00000529994 SLC25A27O95847 323 aa13.68□□□□□ -0.22
SF3B2-208ENST00000529994 ZNF865P0CJ78 1059 aaPredicted RBP13.68□□□□□ -0.22
SF3B2-208ENST00000529994 PBX2P40425 430 aa13.68□□□□□ -0.22
SF3B2-208ENST00000529994 ACLYP53396 1101 aa13.68□□□□□ -0.22
SF3B2-208ENST00000529994 IRX5P78411 483 aaPredicted RBP13.68□□□□□ -0.22
SF3B2-208ENST00000529994 KCTD2Q14681 263 aa13.68□□□□□ -0.22
SF3B2-208ENST00000529994 ZNF792Q3KQV3 632 aa13.68□□□□□ -0.22
SF3B2-208ENST00000529994 CCDC129Q6ZRS4 1044 aa13.68□□□□□ -0.22
SF3B2-208ENST00000529994 LCORLQ8N3X6 602 aa13.68□□□□□ -0.22
SF3B2-208ENST00000529994 STARD7Q9NQZ5 370 aa13.68□□□□□ -0.22
SF3B2-208ENST00000529994 NRBP1Q9UHY1 535 aa13.68□□□□□ -0.22
SF3B2-208ENST00000529994 EXOC6BQ9Y2D4 811 aa13.68□□□□□ -0.22
SF3B2-208ENST00000529994 TMX2Q9Y320 296 aa13.68□□□□□ -0.22
SF3B2-208ENST00000529994 ZNF532Q9HCE3 1301 aa13.67□□□□□ -0.22
SF3B2-208ENST00000529994 MCM3APO60318 1980 aa13.67□□□□□ -0.22
SF3B2-208ENST00000529994 NCOR1O75376 2440 aa13.67□□□□□ -0.22
SF3B2-208ENST00000529994 CYP2D7A0A087X1C5 515 aa13.67□□□□□ -0.22
SF3B2-208ENST00000529994 WDR46O15213 610 aaKnown RBP13.67□□□□□ -0.22
SF3B2-208ENST00000529994 PRKAB2O43741 272 aa13.67□□□□□ -0.22
SF3B2-208ENST00000529994 TIMP1P01033 207 aa13.67□□□□□ -0.22
SF3B2-208ENST00000529994 AKR1A1P14550 325 aa13.67□□□□□ -0.22
SF3B2-208ENST00000529994 KCNA10Q16322 511 aa13.67□□□□□ -0.22
SF3B2-208ENST00000529994 SLFNL1Q499Z3 407 aa13.67□□□□□ -0.22
SF3B2-208ENST00000529994 ANKRD33Q7Z3H0 272 aa13.67□□□□□ -0.22
SF3B2-208ENST00000529994 RIOX2Q8IUF8 465 aa13.67□□□□□ -0.22
SF3B2-208ENST00000529994 TOX2Q96NM4 488 aa13.67□□□□□ -0.22
SF3B2-208ENST00000529994 GAS2L1Q99501 681 aaPredicted RBP13.67□□□□□ -0.22
SF3B2-208ENST00000529994 PRDM12Q9H4Q4 367 aa13.67□□□□□ -0.22
SF3B2-208ENST00000529994 SH2D4AQ9H788 454 aa13.67□□□□□ -0.22
SF3B2-208ENST00000529994 ARMT1Q9H993 441 aa13.67□□□□□ -0.22
SF3B2-208ENST00000529994 IL1RAPL2Q9NP60 686 aa13.67□□□□□ -0.22
SF3B2-208ENST00000529994 CNPY2Q9Y2B0 182 aa13.67□□□□□ -0.22
SF3B2-208ENST00000529994 COG6Q9Y2V7 657 aa13.67□□□□□ -0.22
SF3B2-208ENST00000529994 SYNRGQ9UMZ2 1314 aa13.66□□□□□ -0.22
SF3B2-208ENST00000529994 MYADML2A6NDP7 307 aa13.66□□□□□ -0.22
SF3B2-208ENST00000529994 GOLIM4O00461 696 aa13.66□□□□□ -0.22
SF3B2-208ENST00000529994 ACRP10323 421 aa13.66□□□□□ -0.22
SF3B2-208ENST00000529994 EEF2P13639 858 aaKnown RBP13.66□□□□□ -0.22
SF3B2-208ENST00000529994 STAT3P40763 770 aa13.66□□□□□ -0.22
SF3B2-208ENST00000529994 CCDC85BQ15834 202 aaPredicted RBP13.66□□□□□ -0.22
SF3B2-208ENST00000529994 C16orf59Q7L2K0 433 aa13.66□□□□□ -0.22
SF3B2-208ENST00000529994 YTHDC1Q96MU7 727 aaKnown RBP13.66□□□□□ -0.22
SF3B2-208ENST00000529994 DNAJC2Q99543 621 aaKnown RBP13.66□□□□□ -0.22
SF3B2-208ENST00000529994 PBX4Q9BYU1 374 aa13.66□□□□□ -0.22
SF3B2-208ENST00000529994 SWAP70Q9UH65 585 aa13.66□□□□□ -0.22
SF3B2-208ENST00000529994 ZHX1Q9UKY1 873 aaPredicted RBP13.66□□□□□ -0.22
SF3B2-208ENST00000529994 CHD9Q3L8U1 2897 aa13.66□□□□□ -0.22
SF3B2-208ENST00000529994 GBF1Q92538 1859 aa13.65□□□□□ -0.22
SF3B2-208ENST00000529994 TCRBV5S4A2TA0A5A2 114 aa13.65□□□□□ -0.22
SF3B2-208ENST00000529994 APBB1O00213 710 aa13.65□□□□□ -0.22
SF3B2-208ENST00000529994 VWA5AO00534 786 aa13.65□□□□□ -0.22
SF3B2-208ENST00000529994 MS4A1P11836 297 aa13.65□□□□□ -0.22
SF3B2-208ENST00000529994 CSF2RAP15509 400 aa13.65□□□□□ -0.22
SF3B2-208ENST00000529994 SLC4A3P48751 1232 aa13.65□□□□□ -0.22
SF3B2-208ENST00000529994 TTF1Q15361 905 aaPredicted RBP13.65□□□□□ -0.22
SF3B2-208ENST00000529994 TMEM240Q5SV17 173 aa13.65□□□□□ -0.22
SF3B2-208ENST00000529994 FAM83BQ5T0W9 1011 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms