RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 APOBRQ0VD83 1088 aa7.36□□□□□ -1.23
AMBRA1-209ENST00000529963 SEZ6Q53EL9 994 aa7.36□□□□□ -1.23
AMBRA1-209ENST00000529963 SCARA3Q6AZY7 606 aa7.36□□□□□ -1.23
AMBRA1-209ENST00000529963 HDXQ7Z353 690 aa7.36□□□□□ -1.23
AMBRA1-209ENST00000529963 WAPLQ7Z5K2 1190 aa7.36□□□□□ -1.23
AMBRA1-209ENST00000529963 UBE3DQ7Z6J8 389 aa7.36□□□□□ -1.23
AMBRA1-209ENST00000529963 CCDC84Q86UT8 332 aaPredicted RBP7.36□□□□□ -1.23
AMBRA1-209ENST00000529963 MYRFLQ96LU7 910 aa7.36□□□□□ -1.23
AMBRA1-209ENST00000529963 MPHOSPH9Q99550 1183 aa7.36□□□□□ -1.23
AMBRA1-209ENST00000529963 KCNF1Q9H3M0 494 aa7.36□□□□□ -1.23
AMBRA1-209ENST00000529963 CAPN10Q9HC96 672 aa7.36□□□□□ -1.23
AMBRA1-209ENST00000529963 PXDNQ92626 1479 aa7.36□□□□□ -1.23
AMBRA1-209ENST00000529963 ERVK-24P63145 666 aa7.35□□□□□ -1.23
AMBRA1-209ENST00000529963 HNRNPUQ00839 825 aaKnown RBP eCLIP7.35□□□□□ -1.23
AMBRA1-209ENST00000529963 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.35□□□□□ -1.23
AMBRA1-209ENST00000529963 CYFIP1Q7L576 1253 aa7.35□□□□□ -1.23
AMBRA1-209ENST00000529963 SPOCK3Q9BQ16 436 aa7.35□□□□□ -1.23
AMBRA1-209ENST00000529963 ATXN3LQ9H3M9 355 aa7.35□□□□□ -1.23
AMBRA1-209ENST00000529963 PIDD1Q9HB75 910 aa7.35□□□□□ -1.23
AMBRA1-209ENST00000529963 INPP5FQ9Y2H2 1132 aa7.35□□□□□ -1.23
AMBRA1-209ENST00000529963 PIK3C2GO75747 1445 aa7.35□□□□□ -1.23
AMBRA1-209ENST00000529963 EP400Q96L91 3159 aa7.34□□□□□ -1.23
AMBRA1-209ENST00000529963 PROCP04070 461 aa7.34□□□□□ -1.23
AMBRA1-209ENST00000529963 NFICP08651 508 aa7.34□□□□□ -1.23
AMBRA1-209ENST00000529963 GRK4P32298 578 aa7.34□□□□□ -1.23
AMBRA1-209ENST00000529963 MCM4P33991 863 aa7.34□□□□□ -1.23
AMBRA1-209ENST00000529963 TMEM132EQ6IEE7 984 aa7.34□□□□□ -1.23
AMBRA1-209ENST00000529963 REC114Q7Z4M0 266 aa7.34□□□□□ -1.23
AMBRA1-209ENST00000529963 DEFB132Q7Z7B7 95 aa7.34□□□□□ -1.23
AMBRA1-209ENST00000529963 BRMS1Q9HCU9 246 aa7.34□□□□□ -1.23
AMBRA1-209ENST00000529963 POLR3KQ9Y2Y1 108 aaPredicted RBP7.34□□□□□ -1.23
AMBRA1-209ENST00000529963 DAGLAQ9Y4D2 1042 aa7.34□□□□□ -1.23
AMBRA1-209ENST00000529963 SNCAIPQ9Y6H5 919 aa7.34□□□□□ -1.23
AMBRA1-209ENST00000529963 YTHDC2Q9H6S0 1430 aaKnown RBP7.34□□□□□ -1.23
AMBRA1-209ENST00000529963 SYNGAP1Q96PV0 1343 aa7.34□□□□□ -1.23
AMBRA1-209ENST00000529963 BCL9LQ86UU0 1499 aa7.34□□□□□ -1.24
AMBRA1-209ENST00000529963 KNDC1Q76NI1 1749 aa7.34□□□□□ -1.24
AMBRA1-209ENST00000529963 PLEKHH1Q9ULM0 1364 aa7.33□□□□□ -1.24
AMBRA1-209ENST00000529963 MAP4P27816 1152 aaKnown RBP7.33□□□□□ -1.24
AMBRA1-209ENST00000529963 NTF4P34130 210 aa7.33□□□□□ -1.24
AMBRA1-209ENST00000529963 ETF1P62495 437 aaKnown RBP7.33□□□□□ -1.24
AMBRA1-209ENST00000529963 RING1Q06587 406 aa7.33□□□□□ -1.24
AMBRA1-209ENST00000529963 MPP2Q14168 576 aa7.33□□□□□ -1.24
AMBRA1-209ENST00000529963 FAM20CQ8IXL6 584 aa7.33□□□□□ -1.24
AMBRA1-209ENST00000529963 NKD1Q969G9 470 aa7.33□□□□□ -1.24
AMBRA1-209ENST00000529963 ISL2Q96A47 359 aa7.33□□□□□ -1.24
AMBRA1-209ENST00000529963 NT5C1AQ9BXI3 368 aa7.33□□□□□ -1.24
AMBRA1-209ENST00000529963 GSX1Q9H4S2 264 aaPredicted RBP7.33□□□□□ -1.24
AMBRA1-209ENST00000529963 SPATA31A3Q5VYP0 1347 aa7.33□□□□□ -1.24
AMBRA1-209ENST00000529963 DHX57Q6P158 1386 aaKnown RBP7.33□□□□□ -1.24
AMBRA1-209ENST00000529963 KIF1AQ12756 1690 aa7.33□□□□□ -1.24
AMBRA1-209ENST00000529963 DYNC1LI2O43237 492 aaPredicted RBP7.32□□□□□ -1.24
AMBRA1-209ENST00000529963 CWF19L2Q2TBE0 894 aaKnown RBP7.32□□□□□ -1.24
AMBRA1-209ENST00000529963 ZBTB37Q5TC79 503 aa7.32□□□□□ -1.24
AMBRA1-209ENST00000529963 BEND4Q6ZU67 534 aa7.32□□□□□ -1.24
AMBRA1-209ENST00000529963 KRT28Q7Z3Y7 464 aa7.32□□□□□ -1.24
AMBRA1-209ENST00000529963 UNC5CLQ8IV45 518 aa7.32□□□□□ -1.24
AMBRA1-209ENST00000529963 SMYD4Q8IYR2 804 aaPredicted RBP7.32□□□□□ -1.24
AMBRA1-209ENST00000529963 RNF214Q8ND24 703 aa7.32□□□□□ -1.24
AMBRA1-209ENST00000529963 GPRASP2Q96D09 838 aa7.32□□□□□ -1.24
AMBRA1-209ENST00000529963 SEMA6CQ9H3T2 930 aa7.32□□□□□ -1.24
AMBRA1-209ENST00000529963 ACSS3Q9H6R3 686 aa7.32□□□□□ -1.24
AMBRA1-209ENST00000529963 C14orf93Q9H972 538 aaKnown RBP7.32□□□□□ -1.24
AMBRA1-209ENST00000529963 FBRSQ9HAH7 460 aa7.32□□□□□ -1.24
AMBRA1-209ENST00000529963 SSU72Q9NP77 194 aaKnown RBP7.32□□□□□ -1.24
AMBRA1-209ENST00000529963 IFT172Q9UG01 1749 aa7.32□□□□□ -1.24
AMBRA1-209ENST00000529963 FMN2Q9NZ56 1722 aa7.32□□□□□ -1.24
AMBRA1-209ENST00000529963 MSTNO14793 375 aa7.32□□□□□ -1.24
AMBRA1-209ENST00000529963 DHX15O43143 795 aaKnown RBP7.32□□□□□ -1.24
AMBRA1-209ENST00000529963 NFKBIBQ15653 356 aa7.32□□□□□ -1.24
AMBRA1-209ENST00000529963 UVSSAQ2YD98 709 aa7.32□□□□□ -1.24
AMBRA1-209ENST00000529963 GK5Q6ZS86 529 aa7.32□□□□□ -1.24
AMBRA1-209ENST00000529963 GINM1Q9NU53 330 aa7.32□□□□□ -1.24
AMBRA1-209ENST00000529963 MARF1Q9Y4F3 1742 aaKnown RBP7.31□□□□□ -1.24
AMBRA1-209ENST00000529963 TNS3Q68CZ2 1445 aa7.31□□□□□ -1.24
AMBRA1-209ENST00000529963 HMX2A2RU54 273 aa7.31□□□□□ -1.24
AMBRA1-209ENST00000529963 PGRP06401 933 aa7.31□□□□□ -1.24
AMBRA1-209ENST00000529963 CLCQ05315 142 aa7.31□□□□□ -1.24
AMBRA1-209ENST00000529963 DIEXFQ68CQ4 756 aaKnown RBP7.31□□□□□ -1.24
AMBRA1-209ENST00000529963 TINF2Q9BSI4 451 aa7.31□□□□□ -1.24
AMBRA1-209ENST00000529963 WNT10AQ9GZT5 417 aa7.31□□□□□ -1.24
AMBRA1-209ENST00000529963 PCDHB14Q9Y5E9 798 aa7.31□□□□□ -1.24
AMBRA1-209ENST00000529963 NRXN1Q9ULB1 1477 aa7.31□□□□□ -1.24
AMBRA1-209ENST00000529963 SLIT2O94813 1529 aa7.3□□□□□ -1.24
AMBRA1-209ENST00000529963 SBNO1A3KN83 1393 aa7.3□□□□□ -1.24
AMBRA1-209ENST00000529963 ARHGEF10O15013 1369 aa7.3□□□□□ -1.24
AMBRA1-209ENST00000529963 RALGAPBQ86X10 1494 aa7.3□□□□□ -1.24
AMBRA1-209ENST00000529963 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.3□□□□□ -1.24
AMBRA1-209ENST00000529963 FAM95CA0A1B0GW59 222 aa7.3□□□□□ -1.24
AMBRA1-209ENST00000529963 RBAK-RBAKDNI3L0D1 243 aa7.3□□□□□ -1.24
AMBRA1-209ENST00000529963 FANCGO15287 622 aa7.3□□□□□ -1.24
AMBRA1-209ENST00000529963 PLCG1P19174 1290 aa7.3□□□□□ -1.24
AMBRA1-209ENST00000529963 C1QTNF8P60827 252 aa7.3□□□□□ -1.24
AMBRA1-209ENST00000529963 NKG7Q16617 165 aa7.3□□□□□ -1.24
AMBRA1-209ENST00000529963 NAALADL2Q58DX5 795 aa7.3□□□□□ -1.24
AMBRA1-209ENST00000529963 PRR23CQ6ZRP0 262 aa7.3□□□□□ -1.24
AMBRA1-209ENST00000529963 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.3□□□□□ -1.24
AMBRA1-209ENST00000529963 PRAM1Q96QH2 718 aa7.3□□□□□ -1.24
AMBRA1-209ENST00000529963 DPH2Q9BQC3 489 aaPredicted RBP7.3□□□□□ -1.24
AMBRA1-209ENST00000529963 LRRC3Q9BY71 257 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms