RNA–Protein interactions for RNA: ENST00000529938.1

AP002884.3-204, humanhuman

TSL 1 (best)

Gene AP002884.3, Length 1,166 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002884.3-204ENST00000529938 AAMPQ13685 434 aa17.92■□□□□ 0.46
AP002884.3-204ENST00000529938 C16orf86Q6ZW13 317 aa17.92■□□□□ 0.46
AP002884.3-204ENST00000529938 CLEC10AQ8IUN9 316 aa17.92■□□□□ 0.46
AP002884.3-204ENST00000529938 FAM122AQ96E09 287 aa17.92■□□□□ 0.46
AP002884.3-204ENST00000529938 C12orf42Q96LP6 360 aa17.92■□□□□ 0.46
AP002884.3-204ENST00000529938 LNPKQ9C0E8 428 aa17.92■□□□□ 0.46
AP002884.3-204ENST00000529938 RWDD1Q9H446 243 aaPredicted RBP17.92■□□□□ 0.46
AP002884.3-204ENST00000529938 PRDM5Q9NQX1 630 aaPredicted RBP17.92■□□□□ 0.46
AP002884.3-204ENST00000529938 USP17L15C9J2P7 530 aa17.91■□□□□ 0.46
AP002884.3-204ENST00000529938 USP17L13C9JLJ4 530 aa17.91■□□□□ 0.46
AP002884.3-204ENST00000529938 USP17L11C9JVI0 530 aa17.91■□□□□ 0.46
AP002884.3-204ENST00000529938 USP17L18D6R9N7 530 aa17.91■□□□□ 0.46
AP002884.3-204ENST00000529938 USP17L22D6RA61 530 aa17.91■□□□□ 0.46
AP002884.3-204ENST00000529938 USP17L17D6RBQ6 530 aa17.91■□□□□ 0.46
AP002884.3-204ENST00000529938 USP17L19D6RCP7 530 aa17.91■□□□□ 0.46
AP002884.3-204ENST00000529938 USP17L20D6RJB6 530 aa17.91■□□□□ 0.46
AP002884.3-204ENST00000529938 VCAM1P19320 739 aa17.91■□□□□ 0.46
AP002884.3-204ENST00000529938 PDE1AP54750 535 aa17.91■□□□□ 0.46
AP002884.3-204ENST00000529938 USP17L24Q0WX57 530 aa17.91■□□□□ 0.46
AP002884.3-204ENST00000529938 LRRFIP1Q32MZ4 808 aaKnown RBP17.91■□□□□ 0.46
AP002884.3-204ENST00000529938 TMEM179Q6ZVK1 233 aa17.91■□□□□ 0.46
AP002884.3-204ENST00000529938 CWC22Q9HCG8 908 aaKnown RBP17.91■□□□□ 0.46
AP002884.3-204ENST00000529938 MYH7P12883 1935 aa17.9■□□□□ 0.46
AP002884.3-204ENST00000529938 NCOR1O75376 2440 aa17.9■□□□□ 0.46
AP002884.3-204ENST00000529938 MINDY4BA8MYZ0 360 aa17.9■□□□□ 0.46
AP002884.3-204ENST00000529938 APPP05067 770 aa17.9■□□□□ 0.46
AP002884.3-204ENST00000529938 GRIN2CQ14957 1233 aa17.9■□□□□ 0.46
AP002884.3-204ENST00000529938 GJC2Q5T442 439 aaPredicted RBP17.9■□□□□ 0.46
AP002884.3-204ENST00000529938 CATSPERGQ6ZRH7 1159 aa17.9■□□□□ 0.46
AP002884.3-204ENST00000529938 SIAH1Q8IUQ4 282 aa17.9■□□□□ 0.46
AP002884.3-204ENST00000529938 ARRDC4Q8NCT1 418 aa17.9■□□□□ 0.46
AP002884.3-204ENST00000529938 EPB41L4AQ9HCS5 686 aaPredicted RBP17.9■□□□□ 0.46
AP002884.3-204ENST00000529938 ARPP21Q9UBL0 812 aaPredicted RBP17.9■□□□□ 0.46
AP002884.3-204ENST00000529938 BAZ2AQ9UIF9 1905 aaKnown RBP17.9■□□□□ 0.46
AP002884.3-204ENST00000529938 SLC15A5A6NIM6 579 aa17.89■□□□□ 0.45
AP002884.3-204ENST00000529938 PATL2C9JE40 543 aaKnown RBP17.89■□□□□ 0.45
AP002884.3-204ENST00000529938 ATP2B2Q01814 1243 aa17.89■□□□□ 0.45
AP002884.3-204ENST00000529938 SNX17Q15036 470 aa17.89■□□□□ 0.45
AP002884.3-204ENST00000529938 TRIM60Q495X7 471 aa17.89■□□□□ 0.45
AP002884.3-204ENST00000529938 SBK1Q52WX2 424 aa17.89■□□□□ 0.45
AP002884.3-204ENST00000529938 ZMYM1Q5SVZ6 1142 aa17.89■□□□□ 0.45
AP002884.3-204ENST00000529938 SH3RF1Q7Z6J0 888 aa17.89■□□□□ 0.45
AP002884.3-204ENST00000529938 SMC5Q8IY18 1101 aa17.89■□□□□ 0.45
AP002884.3-204ENST00000529938 TRPV1Q8NER1 839 aa17.89■□□□□ 0.45
AP002884.3-204ENST00000529938 CCDC17Q96LX7 622 aa17.89■□□□□ 0.45
AP002884.3-204ENST00000529938 RPAP3Q9H6T3 665 aaPredicted RBP17.89■□□□□ 0.45
AP002884.3-204ENST00000529938 PDLIM7Q9NR12 457 aa17.89■□□□□ 0.45
AP002884.3-204ENST00000529938 RABGAP1Q9Y3P9 1069 aa17.89■□□□□ 0.45
AP002884.3-204ENST00000529938 RLFQ13129 1914 aa17.89■□□□□ 0.45
AP002884.3-204ENST00000529938 TRIM43BA6NCK2 446 aa17.88■□□□□ 0.45
AP002884.3-204ENST00000529938 HOXC6P09630 235 aa17.88■□□□□ 0.45
AP002884.3-204ENST00000529938 GNAT2P19087 354 aa17.88■□□□□ 0.45
AP002884.3-204ENST00000529938 PTPREP23469 700 aa17.88■□□□□ 0.45
AP002884.3-204ENST00000529938 CYP2C19P33261 490 aa17.88■□□□□ 0.45
AP002884.3-204ENST00000529938 TDO2P48775 406 aa17.88■□□□□ 0.45
AP002884.3-204ENST00000529938 CCNA1P78396 465 aa17.88■□□□□ 0.45
AP002884.3-204ENST00000529938 ICA1Q05084 483 aa17.88■□□□□ 0.45
AP002884.3-204ENST00000529938 KIAA1755Q5JYT7 1200 aa17.88■□□□□ 0.45
AP002884.3-204ENST00000529938 GIMAP6Q6P9H5 292 aa17.88■□□□□ 0.45
AP002884.3-204ENST00000529938 IFNL3Q8IZI9 196 aa17.88■□□□□ 0.45
AP002884.3-204ENST00000529938 TRIM43Q96BQ3 446 aaPredicted RBP17.88■□□□□ 0.45
AP002884.3-204ENST00000529938 RNPC3Q96LT9 517 aaKnown RBP17.88■□□□□ 0.45
AP002884.3-204ENST00000529938 CNMDO75829 334 aa17.87■□□□□ 0.45
AP002884.3-204ENST00000529938 IGHA2P01877 340 aa17.87■□□□□ 0.45
AP002884.3-204ENST00000529938 IRX6P78412 446 aaPredicted RBP17.87■□□□□ 0.45
AP002884.3-204ENST00000529938 CCDC129Q6ZRS4 1044 aa17.87■□□□□ 0.45
AP002884.3-204ENST00000529938 NPLOC4Q8TAT6 608 aa17.87■□□□□ 0.45
AP002884.3-204ENST00000529938 ATXN2LQ8WWM7 1075 aaKnown RBP17.87■□□□□ 0.45
AP002884.3-204ENST00000529938 EVI5LQ96CN4 794 aa17.87■□□□□ 0.45
AP002884.3-204ENST00000529938 KBTBD13C9JR72 458 aa17.86■□□□□ 0.45
AP002884.3-204ENST00000529938 CYBAP13498 195 aa17.86■□□□□ 0.45
AP002884.3-204ENST00000529938 WDR78Q5VTH9 848 aa17.86■□□□□ 0.45
AP002884.3-204ENST00000529938 SPICE1Q8N0Z3 855 aa17.86■□□□□ 0.45
AP002884.3-204ENST00000529938 MKNK2Q9HBH9 465 aa17.86■□□□□ 0.45
AP002884.3-204ENST00000529938 ARHGEF10LQ9HCE6 1279 aa17.86■□□□□ 0.45
AP002884.3-204ENST00000529938 TMX2Q9Y320 296 aa17.86■□□□□ 0.45
AP002884.3-204ENST00000529938 EEF2P13639 858 aaKnown RBP17.85■□□□□ 0.45
AP002884.3-204ENST00000529938 RASA1P20936 1047 aa17.85■□□□□ 0.45
AP002884.3-204ENST00000529938 ITGB8P26012 769 aa17.85■□□□□ 0.45
AP002884.3-204ENST00000529938 HOXD11P31277 338 aaPredicted RBP17.85■□□□□ 0.45
AP002884.3-204ENST00000529938 EPHB4P54760 987 aa17.85■□□□□ 0.45
AP002884.3-204ENST00000529938 GRB14Q14449 540 aa17.85■□□□□ 0.45
AP002884.3-204ENST00000529938 C1orf53Q5VUE5 145 aa17.85■□□□□ 0.45
AP002884.3-204ENST00000529938 CHD1LQ86WJ1 897 aa17.85■□□□□ 0.45
AP002884.3-204ENST00000529938 ASB2Q96Q27 587 aa17.85■□□□□ 0.45
AP002884.3-204ENST00000529938 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.85■□□□□ 0.45
AP002884.3-204ENST00000529938 ZNF576Q9H609 170 aa17.85■□□□□ 0.45
AP002884.3-204ENST00000529938 KANSL2Q9H9L4 492 aa17.85■□□□□ 0.45
AP002884.3-204ENST00000529938 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.84■□□□□ 0.45
AP002884.3-204ENST00000529938 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.84■□□□□ 0.45
AP002884.3-204ENST00000529938 SPDYE16A6NNV3 312 aaPredicted RBP17.84■□□□□ 0.45
AP002884.3-204ENST00000529938 PRDM1O75626 825 aa17.84■□□□□ 0.45
AP002884.3-204ENST00000529938 DNAJB2P25686 324 aa17.84■□□□□ 0.45
AP002884.3-204ENST00000529938 ADCYAP1R1P41586 468 aa17.84■□□□□ 0.45
AP002884.3-204ENST00000529938 NUCB1Q02818 461 aa17.84■□□□□ 0.45
AP002884.3-204ENST00000529938 NACAP1Q9BZK3 213 aa17.84■□□□□ 0.45
AP002884.3-204ENST00000529938 TANGO6Q9C0B7 1094 aa17.84■□□□□ 0.45
AP002884.3-204ENST00000529938 VCPKMTQ9H867 229 aa17.84■□□□□ 0.45
AP002884.3-204ENST00000529938 BTBD7Q9P203 1132 aa17.84■□□□□ 0.45
AP002884.3-204ENST00000529938 TACC3Q9Y6A5 838 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms