RNA–Protein interactions for RNA: ENST00000529637.5

USP48-213, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-213ENST00000529637 NUTM2BA6NNL0 878 aaPredicted RBP16■□□□□ 0.15
USP48-213ENST00000529637 NUTM2EB1AL46 878 aaPredicted RBP16■□□□□ 0.15
USP48-213ENST00000529637 PARP10Q53GL7 1025 aa16■□□□□ 0.15
USP48-213ENST00000529637 EFCAB13Q8IY85 973 aa16■□□□□ 0.15
USP48-213ENST00000529637 SLF1Q9BQI6 1058 aa16■□□□□ 0.15
USP48-213ENST00000529637 PBX1P40424 430 aa16■□□□□ 0.15
USP48-213ENST00000529637 AMPD2Q01433 879 aa16■□□□□ 0.15
USP48-213ENST00000529637 IFIT1BQ5T764 474 aaKnown RBP16■□□□□ 0.15
USP48-213ENST00000529637 NT5DC1Q5TFE4 455 aa16■□□□□ 0.15
USP48-213ENST00000529637 ANKRD18AQ8IVF6 992 aa16■□□□□ 0.15
USP48-213ENST00000529637 HPCAL4Q9UM19 191 aa16■□□□□ 0.15
USP48-213ENST00000529637 MYO6Q9UM54 1294 aa16■□□□□ 0.15
USP48-213ENST00000529637 JAG2Q9Y219 1238 aa16■□□□□ 0.15
USP48-213ENST00000529637 V9GY48 417 aaPredicted RBP16■□□□□ 0.15
USP48-213ENST00000529637 STK36Q9NRP7 1315 aa16■□□□□ 0.15
USP48-213ENST00000529637 MYBL2P10244 700 aa16■□□□□ 0.15
USP48-213ENST00000529637 GGCXP38435 758 aa16■□□□□ 0.15
USP48-213ENST00000529637 CCT5P48643 541 aa16■□□□□ 0.15
USP48-213ENST00000529637 SMIM5Q71RC9 77 aa16■□□□□ 0.15
USP48-213ENST00000529637 ADD3Q9UEY8 706 aaKnown RBP16■□□□□ 0.15
USP48-213ENST00000529637 CCT6AP40227 531 aaKnown RBP15.99■□□□□ 0.15
USP48-213ENST00000529637 CAVIN4Q5BKX8 364 aa15.99■□□□□ 0.15
USP48-213ENST00000529637 FBXW10Q5XX13 1052 aa15.99■□□□□ 0.15
USP48-213ENST00000529637 MMS22LQ6ZRQ5 1243 aa15.99■□□□□ 0.15
USP48-213ENST00000529637 CEP131Q9UPN4 1083 aa15.99■□□□□ 0.15
USP48-213ENST00000529637 SHANK3Q9BYB0 1731 aa15.99■□□□□ 0.15
USP48-213ENST00000529637 CAMTA2O94983 1202 aa15.99■□□□□ 0.15
USP48-213ENST00000529637 ITPK1Q13572 414 aa15.99■□□□□ 0.15
USP48-213ENST00000529637 CATIPQ7Z7H3 387 aa15.99■□□□□ 0.15
USP48-213ENST00000529637 CCDC24Q8N4L8 307 aa15.99■□□□□ 0.15
USP48-213ENST00000529637 MMS19Q96T76 1030 aa15.99■□□□□ 0.15
USP48-213ENST00000529637 CSRNP2Q9H175 543 aa15.99■□□□□ 0.15
USP48-213ENST00000529637 KAT14Q9H8E8 782 aa15.99■□□□□ 0.15
USP48-213ENST00000529637 MYH8P13535 1937 aa15.99■□□□□ 0.15
USP48-213ENST00000529637 TRIM75PA6NK02 468 aa15.98■□□□□ 0.15
USP48-213ENST00000529637 CPP00450 1065 aa15.98■□□□□ 0.15
USP48-213ENST00000529637 PTPREP23469 700 aa15.98■□□□□ 0.15
USP48-213ENST00000529637 PLCD1P51178 756 aa15.98■□□□□ 0.15
USP48-213ENST00000529637 PIP4K2BP78356 416 aa15.98■□□□□ 0.15
USP48-213ENST00000529637 WHAMMP3Q1A5X7 153 aa15.98■□□□□ 0.15
USP48-213ENST00000529637 TTC19Q6DKK2 380 aaPredicted RBP15.98■□□□□ 0.15
USP48-213ENST00000529637 WDR93Q6P2C0 686 aa15.98■□□□□ 0.15
USP48-213ENST00000529637 IQCA1Q86XH1 822 aa15.98■□□□□ 0.15
USP48-213ENST00000529637 TEX2Q8IWB9 1127 aa15.98■□□□□ 0.15
USP48-213ENST00000529637 SECISBP2LQ93073 1101 aaKnown RBP15.98■□□□□ 0.15
USP48-213ENST00000529637 GBP3Q9H0R5 595 aa15.98■□□□□ 0.15
USP48-213ENST00000529637 FOXP1Q9H334 677 aaPredicted RBP15.98■□□□□ 0.15
USP48-213ENST00000529637 FBXO2Q9UK22 296 aaPredicted RBP15.98■□□□□ 0.15
USP48-213ENST00000529637 MTMR7Q9Y216 660 aa15.98■□□□□ 0.15
USP48-213ENST00000529637 A0A087WUV0 522 aaPredicted RBP15.98■□□□□ 0.15
USP48-213ENST00000529637 AGPSO00116 658 aa15.98■□□□□ 0.15
USP48-213ENST00000529637 GUCA1BQ9UMX6 200 aa15.98■□□□□ 0.15
USP48-213ENST00000529637 AARSP49588 968 aaKnown RBP eCLIP15.98■□□□□ 0.15
USP48-213ENST00000529637 STAMQ92783 540 aa15.98■□□□□ 0.15
USP48-213ENST00000529637 CAPZA3Q96KX2 299 aa15.98■□□□□ 0.15
USP48-213ENST00000529637 NAA15Q9BXJ9 866 aaKnown RBP15.98■□□□□ 0.15
USP48-213ENST00000529637 PNPLA7Q6ZV29 1317 aa15.97■□□□□ 0.15
USP48-213ENST00000529637 A0A087X0B3 334 aa15.97■□□□□ 0.15
USP48-213ENST00000529637 ACTN4O43707 911 aaKnown RBP15.97■□□□□ 0.15
USP48-213ENST00000529637 ZNF174Q15697 407 aa15.97■□□□□ 0.15
USP48-213ENST00000529637 SUGP1Q8IWZ8 645 aaKnown RBP15.97■□□□□ 0.15
USP48-213ENST00000529637 SMARCC1Q92922 1105 aaPredicted RBP15.97■□□□□ 0.15
USP48-213ENST00000529637 CHP1Q99653 195 aa15.97■□□□□ 0.15
USP48-213ENST00000529637 ZNF652Q9Y2D9 606 aa15.97■□□□□ 0.15
USP48-213ENST00000529637 MYH3P11055 1940 aa15.97■□□□□ 0.15
USP48-213ENST00000529637 C4AP0C0L4 1744 aa15.97■□□□□ 0.15
USP48-213ENST00000529637 C4BP0C0L5 1744 aa15.97■□□□□ 0.15
USP48-213ENST00000529637 PLEKHA8P1O95397 391 aa15.97■□□□□ 0.15
USP48-213ENST00000529637 NTSR2O95665 410 aa15.97■□□□□ 0.15
USP48-213ENST00000529637 ERFEQ4G0M1 354 aa15.97■□□□□ 0.15
USP48-213ENST00000529637 MCTP2Q6DN12 878 aa15.97■□□□□ 0.15
USP48-213ENST00000529637 EPSTI1Q96J88 318 aa15.97■□□□□ 0.15
USP48-213ENST00000529637 DACH1Q9UI36 760 aa15.97■□□□□ 0.15
USP48-213ENST00000529637 NUP98P52948 1817 aa15.97■□□□□ 0.15
USP48-213ENST00000529637 CHRM1P11229 460 aaPredicted RBP15.96■□□□□ 0.15
USP48-213ENST00000529637 USP14P54578 494 aa15.96■□□□□ 0.15
USP48-213ENST00000529637 DPYDQ12882 1025 aa15.96■□□□□ 0.15
USP48-213ENST00000529637 ENAHQ8N8S7 591 aaPredicted RBP15.96■□□□□ 0.15
USP48-213ENST00000529637 TTF2Q9UNY4 1162 aaKnown RBP15.96■□□□□ 0.15
USP48-213ENST00000529637 REXO2Q9Y3B8 237 aaKnown RBP15.96■□□□□ 0.15
USP48-213ENST00000529637 USP17L12C9JPN9 530 aa15.96■□□□□ 0.15
USP48-213ENST00000529637 USP17L21D6R901 530 aa15.96■□□□□ 0.15
USP48-213ENST00000529637 ERLIN2O94905 339 aa15.96■□□□□ 0.15
USP48-213ENST00000529637 KCNV1Q6PIU1 500 aa15.96■□□□□ 0.15
USP48-213ENST00000529637 CCDC148Q8NFR7 591 aa15.96■□□□□ 0.15
USP48-213ENST00000529637 ZSCAN10Q96SZ4 725 aaPredicted RBP15.96■□□□□ 0.15
USP48-213ENST00000529637 ITGB4P16144 1822 aa15.96■□□□□ 0.15
USP48-213ENST00000529637 XIRP1Q702N8 1843 aaKnown RBP15.96■□□□□ 0.15
USP48-213ENST00000529637 KRT2P35908 639 aa15.96■□□□□ 0.14
USP48-213ENST00000529637 ACBD3Q9H3P7 528 aa15.96■□□□□ 0.14
USP48-213ENST00000529637 FAM169AQ9Y6X4 670 aa15.96■□□□□ 0.14
USP48-213ENST00000529637 RTL9Q8NET4 1388 aa15.95■□□□□ 0.14
USP48-213ENST00000529637 ATP1A1P05023 1023 aaKnown RBP15.95■□□□□ 0.14
USP48-213ENST00000529637 STIM1Q13586 685 aa15.95■□□□□ 0.14
USP48-213ENST00000529637 FAM47AQ5JRC9 791 aa15.95■□□□□ 0.14
USP48-213ENST00000529637 SPATA1Q5VX52 437 aa15.95■□□□□ 0.14
USP48-213ENST00000529637 COG1Q8WTW3 980 aa15.95■□□□□ 0.14
USP48-213ENST00000529637 ABHD10Q9NUJ1 306 aa15.95■□□□□ 0.14
USP48-213ENST00000529637 TFCP2L1Q9NZI6 479 aa15.95■□□□□ 0.14
USP48-213ENST00000529637 LRP6O75581 1613 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms