RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 KLHL3Q9UH77 587 aa7.49□□□□□ -1.21
CSDE1-212ENST00000529046 SHROOM2Q13796 1616 aa7.49□□□□□ -1.21
CSDE1-212ENST00000529046 CDCP2Q5VXM1 449 aa7.48□□□□□ -1.21
CSDE1-212ENST00000529046 MCF2L2Q86YR7 1114 aa7.48□□□□□ -1.21
CSDE1-212ENST00000529046 PPP1R13LQ8WUF5 828 aa7.48□□□□□ -1.21
CSDE1-212ENST00000529046 UBE2FQ969M7 185 aa7.48□□□□□ -1.21
CSDE1-212ENST00000529046 GMIPQ9P107 970 aa7.48□□□□□ -1.21
CSDE1-212ENST00000529046 CEP170Q5SW79 1584 aa7.47□□□□□ -1.21
CSDE1-212ENST00000529046 SLC22A31A6NKX4 558 aa7.47□□□□□ -1.21
CSDE1-212ENST00000529046 GIPRP48546 466 aa7.47□□□□□ -1.21
CSDE1-212ENST00000529046 NASPP49321 788 aaPredicted RBP7.47□□□□□ -1.21
CSDE1-212ENST00000529046 ARID5AQ03989 594 aa7.47□□□□□ -1.21
CSDE1-212ENST00000529046 LRRFIP1Q32MZ4 808 aaKnown RBP7.47□□□□□ -1.21
CSDE1-212ENST00000529046 TAB3Q8N5C8 712 aaPredicted RBP7.47□□□□□ -1.21
CSDE1-212ENST00000529046 FLAD1Q8NFF5 587 aa7.47□□□□□ -1.21
CSDE1-212ENST00000529046 SHDQ96IW2 340 aa7.47□□□□□ -1.21
CSDE1-212ENST00000529046 ZSWIM5Q9P217 1185 aa7.47□□□□□ -1.21
CSDE1-212ENST00000529046 CHURC1-FNTBB4DL54 471 aa7.46□□□□□ -1.22
CSDE1-212ENST00000529046 RBAK-RBAKDNI3L0D1 243 aa7.46□□□□□ -1.22
CSDE1-212ENST00000529046 GK5Q6ZS86 529 aa7.46□□□□□ -1.22
CSDE1-212ENST00000529046 VPS37DQ86XT2 251 aa7.46□□□□□ -1.22
CSDE1-212ENST00000529046 TMEM40Q8WWA1 233 aa7.46□□□□□ -1.22
CSDE1-212ENST00000529046 FAM168AQ92567 244 aa7.46□□□□□ -1.22
CSDE1-212ENST00000529046 Q96M66 194 aa7.46□□□□□ -1.22
CSDE1-212ENST00000529046 CNNM2Q9H8M5 875 aa7.46□□□□□ -1.22
CSDE1-212ENST00000529046 PPT2Q9UMR5 302 aa7.46□□□□□ -1.22
CSDE1-212ENST00000529046 TNFRSF10CO14798 259 aa7.45□□□□□ -1.22
CSDE1-212ENST00000529046 MCM4P33991 863 aa7.45□□□□□ -1.22
CSDE1-212ENST00000529046 MLECQ14165 292 aa7.45□□□□□ -1.22
CSDE1-212ENST00000529046 INTS3Q68E01 1043 aaKnown RBP7.45□□□□□ -1.22
CSDE1-212ENST00000529046 OGFOD2Q6N063 350 aa7.45□□□□□ -1.22
CSDE1-212ENST00000529046 PHACTR4Q8IZ21 702 aa7.45□□□□□ -1.22
CSDE1-212ENST00000529046 RNF141Q8WVD5 230 aa7.45□□□□□ -1.22
CSDE1-212ENST00000529046 ARMC5Q96C12 935 aa7.45□□□□□ -1.22
CSDE1-212ENST00000529046 CCDC74BQ96LY2 380 aa7.45□□□□□ -1.22
CSDE1-212ENST00000529046 TRIT1Q9H3H1 467 aaKnown RBP7.45□□□□□ -1.22
CSDE1-212ENST00000529046 CARMIL2Q6F5E8 1435 aa7.44□□□□□ -1.22
CSDE1-212ENST00000529046 OVOS1Q6IE37 1185 aa7.44□□□□□ -1.22
CSDE1-212ENST00000529046 TMPRSS7Q7RTY8 843 aa7.44□□□□□ -1.22
CSDE1-212ENST00000529046 OR6P1Q8NGX9 317 aa7.44□□□□□ -1.22
CSDE1-212ENST00000529046 BAHD1Q8TBE0 780 aaPredicted RBP7.44□□□□□ -1.22
CSDE1-212ENST00000529046 ATG4CQ96DT6 458 aa7.44□□□□□ -1.22
CSDE1-212ENST00000529046 SRRTQ9BXP5 876 aaKnown RBP7.44□□□□□ -1.22
CSDE1-212ENST00000529046 KCNH3Q9ULD8 1083 aa7.44□□□□□ -1.22
CSDE1-212ENST00000529046 CTNND2Q9UQB3 1225 aa7.44□□□□□ -1.22
CSDE1-212ENST00000529046 PRG4Q92954 1404 aaPredicted RBP7.44□□□□□ -1.22
CSDE1-212ENST00000529046 ERCC6L2Q5T890 1561 aa7.43□□□□□ -1.22
CSDE1-212ENST00000529046 CCNFP41002 786 aa7.43□□□□□ -1.22
CSDE1-212ENST00000529046 LSRQ86X29 649 aaPredicted RBP7.43□□□□□ -1.22
CSDE1-212ENST00000529046 C19orf47Q8N9M1 422 aaKnown RBP7.43□□□□□ -1.22
CSDE1-212ENST00000529046 DTWD2Q8NBA8 298 aa7.43□□□□□ -1.22
CSDE1-212ENST00000529046 KREMEN1Q96MU8 473 aa7.43□□□□□ -1.22
CSDE1-212ENST00000529046 TM9SF2Q99805 663 aa7.43□□□□□ -1.22
CSDE1-212ENST00000529046 KRTAP4-9Q9BYQ8 210 aa7.43□□□□□ -1.22
CSDE1-212ENST00000529046 ANTXR1Q9H6X2 564 aa7.43□□□□□ -1.22
CSDE1-212ENST00000529046 GPATCH2Q9NW75 528 aa7.43□□□□□ -1.22
CSDE1-212ENST00000529046 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.43□□□□□ -1.22
CSDE1-212ENST00000529046 KIAA0586Q9BVV6 1533 aa7.42□□□□□ -1.22
CSDE1-212ENST00000529046 NME1P15531 152 aaKnown RBP7.42□□□□□ -1.22
CSDE1-212ENST00000529046 GBP1P32455 592 aa7.42□□□□□ -1.22
CSDE1-212ENST00000529046 CHMP4BP1P59074 171 aa7.42□□□□□ -1.22
CSDE1-212ENST00000529046 NLRC3Q7RTR2 1065 aa7.42□□□□□ -1.22
CSDE1-212ENST00000529046 ZSWIM9Q86XI8 627 aa7.42□□□□□ -1.22
CSDE1-212ENST00000529046 CCDC120Q96HB5 630 aa7.42□□□□□ -1.22
CSDE1-212ENST00000529046 ALPK1Q96QP1 1244 aa7.42□□□□□ -1.22
CSDE1-212ENST00000529046 FERD3LQ96RJ6 166 aa7.42□□□□□ -1.22
CSDE1-212ENST00000529046 KIF2CQ99661 725 aa7.42□□□□□ -1.22
CSDE1-212ENST00000529046 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.42□□□□□ -1.22
CSDE1-212ENST00000529046 ASPNQ9BXN1 380 aa7.42□□□□□ -1.22
CSDE1-212ENST00000529046 GPR62Q9BZJ7 368 aa7.42□□□□□ -1.22
CSDE1-212ENST00000529046 DUSP15Q9H1R2 295 aaPredicted RBP7.42□□□□□ -1.22
CSDE1-212ENST00000529046 KIF27Q86VH2 1401 aa7.42□□□□□ -1.22
CSDE1-212ENST00000529046 RGS13O14921 159 aa7.41□□□□□ -1.22
CSDE1-212ENST00000529046 ESR1P03372 595 aa7.41□□□□□ -1.22
CSDE1-212ENST00000529046 ACRP10323 421 aa7.41□□□□□ -1.22
CSDE1-212ENST00000529046 TPP2P29144 1249 aaPredicted RBP7.41□□□□□ -1.22
CSDE1-212ENST00000529046 DNAJA1P31689 397 aaKnown RBP7.41□□□□□ -1.22
CSDE1-212ENST00000529046 AFMP43652 599 aa7.41□□□□□ -1.22
CSDE1-212ENST00000529046 RANGAP1P46060 587 aaPredicted RBP7.41□□□□□ -1.22
CSDE1-212ENST00000529046 CASP7P55210 303 aa7.41□□□□□ -1.22
CSDE1-212ENST00000529046 EIF6P56537 245 aaKnown RBP7.41□□□□□ -1.22
CSDE1-212ENST00000529046 KCNMB1Q16558 191 aa7.41□□□□□ -1.22
CSDE1-212ENST00000529046 ARSHQ5FYA8 562 aa7.41□□□□□ -1.22
CSDE1-212ENST00000529046 CCDC81Q6ZN84 652 aa7.41□□□□□ -1.22
CSDE1-212ENST00000529046 CREG2Q8IUH2 290 aa7.41□□□□□ -1.22
CSDE1-212ENST00000529046 SREK1Q8WXA9 508 aaKnown RBP7.41□□□□□ -1.22
CSDE1-212ENST00000529046 VWCEQ96DN2 955 aa7.41□□□□□ -1.22
CSDE1-212ENST00000529046 SLAMF8Q9P0V8 285 aa7.41□□□□□ -1.22
CSDE1-212ENST00000529046 WASH4PA8MWX3 477 aa7.4□□□□□ -1.22
CSDE1-212ENST00000529046 LRRN2O75325 713 aa7.4□□□□□ -1.22
CSDE1-212ENST00000529046 SRFP11831 508 aa7.4□□□□□ -1.22
CSDE1-212ENST00000529046 RAG1P15918 1043 aa7.4□□□□□ -1.22
CSDE1-212ENST00000529046 GDNFP39905 211 aa7.4□□□□□ -1.22
CSDE1-212ENST00000529046 SF3A1Q15459 793 aaKnown RBP7.4□□□□□ -1.22
CSDE1-212ENST00000529046 POU5F2Q8N7G0 328 aa7.4□□□□□ -1.22
CSDE1-212ENST00000529046 FAM169BQ8N8A8 192 aa7.4□□□□□ -1.22
CSDE1-212ENST00000529046 C19orf73Q9NVV2 129 aa7.4□□□□□ -1.22
CSDE1-212ENST00000529046 DUSP13Q9UII6 198 aa7.4□□□□□ -1.22
CSDE1-212ENST00000529046 UBOX5O94941 541 aa7.39□□□□□ -1.23
CSDE1-212ENST00000529046 GUCY2CP25092 1073 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms