RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 FAM83AQ86UY5 434 aa10.41□□□□□ -0.74
SSBP3-212ENST00000528930 TRMT44Q8IYL2 757 aaKnown RBP10.41□□□□□ -0.74
SSBP3-212ENST00000528930 SPRYD3Q8NCJ5 442 aa10.41□□□□□ -0.74
SSBP3-212ENST00000528930 PRSS33Q8NF86 280 aa10.41□□□□□ -0.74
SSBP3-212ENST00000528930 ANKS1AQ92625 1134 aa10.41□□□□□ -0.74
SSBP3-212ENST00000528930 XAGE2Q96GT9 111 aa10.41□□□□□ -0.74
SSBP3-212ENST00000528930 MRIQ9BWK5 157 aa10.41□□□□□ -0.74
SSBP3-212ENST00000528930 NPDC1Q9NQX5 325 aaPredicted RBP10.41□□□□□ -0.74
SSBP3-212ENST00000528930 AKAP2Q9Y2D5 859 aa10.41□□□□□ -0.74
SSBP3-212ENST00000528930 NOP58Q9Y2X3 529 aaKnown RBP10.41□□□□□ -0.74
SSBP3-212ENST00000528930 SUGT1Q9Y2Z0 365 aa10.41□□□□□ -0.74
SSBP3-212ENST00000528930 ATAD5Q96QE3 1844 aa10.41□□□□□ -0.74
SSBP3-212ENST00000528930 ZFHX2Q9C0A1 2572 aaPredicted RBP10.41□□□□□ -0.74
SSBP3-212ENST00000528930 RIF1Q5UIP0 2472 aaKnown RBP10.4□□□□□ -0.74
SSBP3-212ENST00000528930 GRXCR1A8MXD5 290 aa10.4□□□□□ -0.74
SSBP3-212ENST00000528930 CYP2B6P20813 491 aa10.4□□□□□ -0.74
SSBP3-212ENST00000528930 GGCXP38435 758 aa10.4□□□□□ -0.74
SSBP3-212ENST00000528930 CRKP46108 304 aa10.4□□□□□ -0.74
SSBP3-212ENST00000528930 FPGSQ05932 587 aa10.4□□□□□ -0.74
SSBP3-212ENST00000528930 CEP85Q6P2H3 762 aa10.4□□□□□ -0.74
SSBP3-212ENST00000528930 WDR66Q8TBY9 1149 aa10.4□□□□□ -0.74
SSBP3-212ENST00000528930 LPAR1Q92633 364 aa10.4□□□□□ -0.74
SSBP3-212ENST00000528930 ZNF775Q96BV0 537 aaPredicted RBP10.4□□□□□ -0.74
SSBP3-212ENST00000528930 GNL3LQ9NVN8 582 aaKnown RBP10.4□□□□□ -0.74
SSBP3-212ENST00000528930 WDR70Q9NW82 654 aa10.4□□□□□ -0.74
SSBP3-212ENST00000528930 COG6Q9Y2V7 657 aa10.4□□□□□ -0.74
SSBP3-212ENST00000528930 TECTAO75443 2155 aa10.4□□□□□ -0.74
SSBP3-212ENST00000528930 SALL1Q9NSC2 1324 aa10.39□□□□□ -0.75
SSBP3-212ENST00000528930 SEMA3EO15041 775 aa10.39□□□□□ -0.75
SSBP3-212ENST00000528930 KIAA0355O15063 1070 aa10.39□□□□□ -0.75
SSBP3-212ENST00000528930 SURF6O75683 361 aaKnown RBP10.39□□□□□ -0.75
SSBP3-212ENST00000528930 ZKSCAN1P17029 563 aaPredicted RBP10.39□□□□□ -0.75
SSBP3-212ENST00000528930 KCTD2Q14681 263 aa10.39□□□□□ -0.75
SSBP3-212ENST00000528930 SKIV2LQ15477 1246 aaKnown RBP10.39□□□□□ -0.75
SSBP3-212ENST00000528930 RAB30Q15771 203 aa10.39□□□□□ -0.75
SSBP3-212ENST00000528930 C20orf194Q5TEA3 1177 aa10.39□□□□□ -0.75
SSBP3-212ENST00000528930 FKBP1CQ5VVH2 108 aa10.39□□□□□ -0.75
SSBP3-212ENST00000528930 APOBEC3HQ6NTF7 200 aaKnown RBP10.39□□□□□ -0.75
SSBP3-212ENST00000528930 MICALL1Q8N3F8 863 aa10.39□□□□□ -0.75
SSBP3-212ENST00000528930 TTC13Q8NBP0 860 aa10.39□□□□□ -0.75
SSBP3-212ENST00000528930 SOCS4Q8WXH5 440 aa10.39□□□□□ -0.75
SSBP3-212ENST00000528930 NEUROD6Q96NK8 337 aa10.39□□□□□ -0.75
SSBP3-212ENST00000528930 GPR108Q9NPR9 543 aa10.39□□□□□ -0.75
SSBP3-212ENST00000528930 ZBTB40Q9NUA8 1239 aa10.39□□□□□ -0.75
SSBP3-212ENST00000528930 DENND2AQ9ULE3 1009 aa10.39□□□□□ -0.75
SSBP3-212ENST00000528930 PRDX5P30044 214 aa10.38□□□□□ -0.75
SSBP3-212ENST00000528930 GCLCP48506 637 aaPredicted RBP10.38□□□□□ -0.75
SSBP3-212ENST00000528930 RASGRF1Q13972 1273 aa10.38□□□□□ -0.75
SSBP3-212ENST00000528930 HHIPL2Q6UWX4 724 aa10.38□□□□□ -0.75
SSBP3-212ENST00000528930 GADL1Q6ZQY3 521 aa10.38□□□□□ -0.75
SSBP3-212ENST00000528930 CCDC129Q6ZRS4 1044 aa10.38□□□□□ -0.75
SSBP3-212ENST00000528930 SLF2Q8IX21 1173 aa10.38□□□□□ -0.75
SSBP3-212ENST00000528930 GJD3Q8N144 294 aa10.38□□□□□ -0.75
SSBP3-212ENST00000528930 USP6NLQ92738 828 aa10.38□□□□□ -0.75
SSBP3-212ENST00000528930 TEKT1Q969V4 418 aa10.38□□□□□ -0.75
SSBP3-212ENST00000528930 ZDHHC15Q96MV8 337 aa10.38□□□□□ -0.75
SSBP3-212ENST00000528930 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.38□□□□□ -0.75
SSBP3-212ENST00000528930 DDX20Q9UHI6 824 aaKnown RBP10.38□□□□□ -0.75
SSBP3-212ENST00000528930 DDX19BQ9UMR2 479 aa10.38□□□□□ -0.75
SSBP3-212ENST00000528930 AGTPBP1Q9UPW5 1226 aa10.38□□□□□ -0.75
SSBP3-212ENST00000528930 PDS5AQ29RF7 1337 aaKnown RBP10.37□□□□□ -0.75
SSBP3-212ENST00000528930 CHD6Q8TD26 2715 aa10.37□□□□□ -0.75
SSBP3-212ENST00000528930 MSCO60682 206 aa10.37□□□□□ -0.75
SSBP3-212ENST00000528930 CACNB3P54284 484 aa10.37□□□□□ -0.75
SSBP3-212ENST00000528930 TNNI3KQ59H18 835 aa10.37□□□□□ -0.75
SSBP3-212ENST00000528930 TRIM67Q6ZTA4 783 aa10.37□□□□□ -0.75
SSBP3-212ENST00000528930 HFE2Q6ZVN8 426 aa10.37□□□□□ -0.75
SSBP3-212ENST00000528930 MIGA2Q7L4E1 593 aa10.37□□□□□ -0.75
SSBP3-212ENST00000528930 SIRT2Q8IXJ6 389 aa10.37□□□□□ -0.75
SSBP3-212ENST00000528930 FAM178BQ8IXR5 827 aa10.37□□□□□ -0.75
SSBP3-212ENST00000528930 EMID1Q96A84 441 aaPredicted RBP10.37□□□□□ -0.75
SSBP3-212ENST00000528930 NUDT12Q9BQG2 462 aa10.37□□□□□ -0.75
SSBP3-212ENST00000528930 MORF4L1Q9UBU8 362 aa10.37□□□□□ -0.75
SSBP3-212ENST00000528930 AFG3L2Q9Y4W6 797 aa10.37□□□□□ -0.75
SSBP3-212ENST00000528930 TACC3Q9Y6A5 838 aa10.37□□□□□ -0.75
SSBP3-212ENST00000528930 MTCH2Q9Y6C9 303 aa10.37□□□□□ -0.75
SSBP3-212ENST00000528930 FPGT-TNNI3KV9GXZ4 949 aa10.37□□□□□ -0.75
SSBP3-212ENST00000528930 MAST3O60307 1309 aa10.36□□□□□ -0.75
SSBP3-212ENST00000528930 LDHBP07195 334 aaKnown RBP10.36□□□□□ -0.75
SSBP3-212ENST00000528930 ARID4AP29374 1257 aaPredicted RBP10.36□□□□□ -0.75
SSBP3-212ENST00000528930 DIXDC1Q155Q3 683 aa10.36□□□□□ -0.75
SSBP3-212ENST00000528930 CCL14Q16627 93 aa10.36□□□□□ -0.75
SSBP3-212ENST00000528930 RPAP2Q8IXW5 612 aaPredicted RBP10.36□□□□□ -0.75
SSBP3-212ENST00000528930 HLA-CQ95604 372 aa10.36□□□□□ -0.75
SSBP3-212ENST00000528930 EAF2Q96CJ1 260 aaPredicted RBP10.36□□□□□ -0.75
SSBP3-212ENST00000528930 NKX2-4Q9H2Z4 354 aa10.36□□□□□ -0.75
SSBP3-212ENST00000528930 HMG20BQ9P0W2 317 aa10.36□□□□□ -0.75
SSBP3-212ENST00000528930 ACACBO00763 2458 aa10.36□□□□□ -0.75
SSBP3-212ENST00000528930 COL4A6Q14031 1691 aa10.35□□□□□ -0.75
SSBP3-212ENST00000528930 RNF223E7ERA6 249 aa10.35□□□□□ -0.75
SSBP3-212ENST00000528930 DCXO43602 365 aa10.35□□□□□ -0.75
SSBP3-212ENST00000528930 CLTBP09497 229 aa10.35□□□□□ -0.75
SSBP3-212ENST00000528930 RAG1P15918 1043 aa10.35□□□□□ -0.75
SSBP3-212ENST00000528930 SLC19A1P41440 591 aa10.35□□□□□ -0.75
SSBP3-212ENST00000528930 MCAMP43121 646 aa10.35□□□□□ -0.75
SSBP3-212ENST00000528930 TLE2Q04725 743 aa10.35□□□□□ -0.75
SSBP3-212ENST00000528930 TCF15Q12870 199 aa10.35□□□□□ -0.75
SSBP3-212ENST00000528930 OS9Q13438 667 aaPredicted RBP10.35□□□□□ -0.75
SSBP3-212ENST00000528930 BLOC1S3Q6QNY0 202 aa10.35□□□□□ -0.75
SSBP3-212ENST00000528930 PI16Q6UXB8 463 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms