RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 MECOMQ03112 1051 aa9.48□□□□□ -0.89
CSTF3-208ENST00000528865 TRIM14Q14142 442 aa9.48□□□□□ -0.89
CSTF3-208ENST00000528865 KCNB1Q14721 858 aa9.48□□□□□ -0.89
CSTF3-208ENST00000528865 MTF1Q14872 753 aa9.48□□□□□ -0.89
CSTF3-208ENST00000528865 BRD3Q15059 726 aa9.48□□□□□ -0.89
CSTF3-208ENST00000528865 KRT31Q15323 416 aa9.48□□□□□ -0.89
CSTF3-208ENST00000528865 TAF3Q5VWG9 929 aa9.48□□□□□ -0.89
CSTF3-208ENST00000528865 GALNT17Q6IS24 598 aa9.48□□□□□ -0.89
CSTF3-208ENST00000528865 ZNF771Q7L3S4 317 aaPredicted RBP9.48□□□□□ -0.89
CSTF3-208ENST00000528865 CEP112Q8N8E3 955 aa9.48□□□□□ -0.89
CSTF3-208ENST00000528865 HNRNPLLQ8WVV9 542 aaKnown RBP9.48□□□□□ -0.89
CSTF3-208ENST00000528865 GOLGA1Q92805 767 aa9.48□□□□□ -0.89
CSTF3-208ENST00000528865 CELF1Q92879 486 aaKnown RBP9.48□□□□□ -0.89
CSTF3-208ENST00000528865 MYO1AQ9UBC5 1043 aa9.48□□□□□ -0.89
CSTF3-208ENST00000528865 MKRN1Q9UHC7 482 aaKnown RBP9.48□□□□□ -0.89
CSTF3-208ENST00000528865 CDC23Q9UJX2 597 aa9.48□□□□□ -0.89
CSTF3-208ENST00000528865 AHDC1Q5TGY3 1603 aaPredicted RBP9.48□□□□□ -0.89
CSTF3-208ENST00000528865 MYH6P13533 1939 aa9.48□□□□□ -0.89
CSTF3-208ENST00000528865 ZNF831Q5JPB2 1677 aa9.48□□□□□ -0.89
CSTF3-208ENST00000528865 A0A1B0GUL6 1792 aa9.47□□□□□ -0.89
CSTF3-208ENST00000528865 MYH2Q9UKX2 1941 aa9.47□□□□□ -0.89
CSTF3-208ENST00000528865 A0A1W2PQC6 194 aa9.47□□□□□ -0.89
CSTF3-208ENST00000528865 hCG_1642624A0A1W2PR95 340 aa9.47□□□□□ -0.89
CSTF3-208ENST00000528865 POTEB2H3BUK9 544 aa9.47□□□□□ -0.89
CSTF3-208ENST00000528865 TBC1D8O95759 1140 aa9.47□□□□□ -0.89
CSTF3-208ENST00000528865 RPN1P04843 607 aaKnown RBP9.47□□□□□ -0.89
CSTF3-208ENST00000528865 GYPCP04921 128 aa9.47□□□□□ -0.89
CSTF3-208ENST00000528865 CASP1P29466 404 aa9.47□□□□□ -0.89
CSTF3-208ENST00000528865 HIBADHP31937 336 aaKnown RBP9.47□□□□□ -0.89
CSTF3-208ENST00000528865 CASP14P31944 242 aa9.47□□□□□ -0.89
CSTF3-208ENST00000528865 TXLNAP40222 546 aa9.47□□□□□ -0.89
CSTF3-208ENST00000528865 ARHGAP25P42331 645 aa9.47□□□□□ -0.89
CSTF3-208ENST00000528865 GNAQP50148 359 aa9.47□□□□□ -0.89
CSTF3-208ENST00000528865 PPP4CP60510 307 aa9.47□□□□□ -0.89
CSTF3-208ENST00000528865 GRM4Q14833 912 aa9.47□□□□□ -0.89
CSTF3-208ENST00000528865 RC3H1Q5TC82 1133 aaKnown RBP9.47□□□□□ -0.89
CSTF3-208ENST00000528865 RRAGBQ5VZM2 374 aa9.47□□□□□ -0.89
CSTF3-208ENST00000528865 SPTY2D1Q68D10 685 aaPredicted RBP9.47□□□□□ -0.89
CSTF3-208ENST00000528865 ZNF662Q6ZS27 426 aa9.47□□□□□ -0.89
CSTF3-208ENST00000528865 PIK3AP1Q6ZUJ8 805 aa9.47□□□□□ -0.89
CSTF3-208ENST00000528865 SRGAP1Q7Z6B7 1085 aa9.47□□□□□ -0.89
CSTF3-208ENST00000528865 BLIDQ8IZY5 108 aa9.47□□□□□ -0.89
CSTF3-208ENST00000528865 ADSSL1Q8N142 457 aa9.47□□□□□ -0.89
CSTF3-208ENST00000528865 MSANTD4Q8NCY6 345 aa9.47□□□□□ -0.89
CSTF3-208ENST00000528865 ACSBG1Q96GR2 724 aa9.47□□□□□ -0.89
CSTF3-208ENST00000528865 DESI2Q9BSY9 194 aa9.47□□□□□ -0.89
CSTF3-208ENST00000528865 PARD6BQ9BYG5 372 aa9.47□□□□□ -0.89
CSTF3-208ENST00000528865 CCSER1Q9C0I3 900 aa9.47□□□□□ -0.89
CSTF3-208ENST00000528865 RAB21Q9UL25 225 aa9.47□□□□□ -0.89
CSTF3-208ENST00000528865 PCDHA4Q9UN74 947 aa9.47□□□□□ -0.89
CSTF3-208ENST00000528865 SPATA31A5Q5VU36 1347 aa9.47□□□□□ -0.89
CSTF3-208ENST00000528865 SPATA31A7Q8IWB4 1347 aa9.47□□□□□ -0.89
CSTF3-208ENST00000528865 CNTNAP4Q9C0A0 1308 aa9.47□□□□□ -0.89
CSTF3-208ENST00000528865 CCDC151A5D8V7 595 aa9.46□□□□□ -0.9
CSTF3-208ENST00000528865 MAP2K7O14733 419 aa9.46□□□□□ -0.9
CSTF3-208ENST00000528865 ADAMTS3O15072 1205 aa9.46□□□□□ -0.9
CSTF3-208ENST00000528865 KIF5CO60282 957 aa9.46□□□□□ -0.9
CSTF3-208ENST00000528865 TUBBP07437 444 aa9.46□□□□□ -0.9
CSTF3-208ENST00000528865 CYP2D6P10635 497 aa9.46□□□□□ -0.9
CSTF3-208ENST00000528865 VEGFAP15692 232 aaPredicted RBP9.46□□□□□ -0.9
CSTF3-208ENST00000528865 TM4SF1P30408 202 aa9.46□□□□□ -0.9
CSTF3-208ENST00000528865 USP5P45974 858 aa9.46□□□□□ -0.9
CSTF3-208ENST00000528865 FXR1P51114 621 aaKnown RBP eCLIP9.46□□□□□ -0.9
CSTF3-208ENST00000528865 PAK1Q13153 545 aa9.46□□□□□ -0.9
CSTF3-208ENST00000528865 KARSQ15046 597 aaKnown RBP9.46□□□□□ -0.9
CSTF3-208ENST00000528865 TCP11X2Q5H9J9 407 aa9.46□□□□□ -0.9
CSTF3-208ENST00000528865 FAM47AQ5JRC9 791 aa9.46□□□□□ -0.9
CSTF3-208ENST00000528865 C12orf60Q5U649 245 aa9.46□□□□□ -0.9
CSTF3-208ENST00000528865 KLHL10Q6JEL2 608 aa9.46□□□□□ -0.9
CSTF3-208ENST00000528865 CYP26C1Q6V0L0 522 aa9.46□□□□□ -0.9
CSTF3-208ENST00000528865 SMYD4Q8IYR2 804 aaPredicted RBP9.46□□□□□ -0.9
CSTF3-208ENST00000528865 LINC00116Q8NCU8 138 aa9.46□□□□□ -0.9
CSTF3-208ENST00000528865 ANKRD20A12PQ8NF67 263 aa9.46□□□□□ -0.9
CSTF3-208ENST00000528865 ZNF507Q8TCN5 953 aa9.46□□□□□ -0.9
CSTF3-208ENST00000528865 CCDC12Q8WUD4 166 aaPredicted RBP9.46□□□□□ -0.9
CSTF3-208ENST00000528865 NELFBQ8WX92 580 aa9.46□□□□□ -0.9
CSTF3-208ENST00000528865 LZTS2Q9BRK4 669 aa9.46□□□□□ -0.9
CSTF3-208ENST00000528865 NYXQ9GZU5 481 aa9.46□□□□□ -0.9
CSTF3-208ENST00000528865 BLZF1Q9H2G9 400 aa9.46□□□□□ -0.9
CSTF3-208ENST00000528865 NARFQ9UHQ1 456 aa9.46□□□□□ -0.9
CSTF3-208ENST00000528865 CTNND2Q9UQB3 1225 aa9.46□□□□□ -0.9
CSTF3-208ENST00000528865 SCN7AQ01118 1682 aa9.45□□□□□ -0.9
CSTF3-208ENST00000528865 PALM3A6NDB9 673 aaPredicted RBP9.45□□□□□ -0.9
CSTF3-208ENST00000528865 KCNJ18B7U540 433 aa9.45□□□□□ -0.9
CSTF3-208ENST00000528865 RNF225M0QZC1 329 aaPredicted RBP9.45□□□□□ -0.9
CSTF3-208ENST00000528865 LAD1O00515 517 aa9.45□□□□□ -0.9
CSTF3-208ENST00000528865 N4BP3O15049 544 aa9.45□□□□□ -0.9
CSTF3-208ENST00000528865 KLRC4O43908 158 aa9.45□□□□□ -0.9
CSTF3-208ENST00000528865 NMT2O60551 498 aa9.45□□□□□ -0.9
CSTF3-208ENST00000528865 SASH3O75995 380 aa9.45□□□□□ -0.9
CSTF3-208ENST00000528865 EEF1GP26641 437 aaKnown RBP9.45□□□□□ -0.9
CSTF3-208ENST00000528865 SMARCA1P28370 1054 aa9.45□□□□□ -0.9
CSTF3-208ENST00000528865 CYP2C19P33261 490 aa9.45□□□□□ -0.9
CSTF3-208ENST00000528865 PRPHP41219 470 aa9.45□□□□□ -0.9
CSTF3-208ENST00000528865 ERVK-24P63145 666 aa9.45□□□□□ -0.9
CSTF3-208ENST00000528865 EVX2Q03828 476 aa9.45□□□□□ -0.9
CSTF3-208ENST00000528865 KCNJ12Q14500 433 aa9.45□□□□□ -0.9
CSTF3-208ENST00000528865 NAALADL2Q58DX5 795 aa9.45□□□□□ -0.9
CSTF3-208ENST00000528865 WWC2Q6AWC2 1192 aa9.45□□□□□ -0.9
CSTF3-208ENST00000528865 IRF2BP1Q8IU81 584 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 202.8 ms