RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 ANP32AP39687 249 aaKnown RBP9.23□□□□□ -0.93
SSBP3-211ENST00000528787 GCLCP48506 637 aaPredicted RBP9.23□□□□□ -0.93
SSBP3-211ENST00000528787 MAP2K1Q02750 393 aaPredicted RBP9.23□□□□□ -0.93
SSBP3-211ENST00000528787 CCDC96Q2M329 555 aa9.23□□□□□ -0.93
SSBP3-211ENST00000528787 CYB5R4Q7L1T6 521 aa9.23□□□□□ -0.93
SSBP3-211ENST00000528787 BRF1Q92994 677 aa9.23□□□□□ -0.93
SSBP3-211ENST00000528787 CAPNS2Q96L46 248 aa9.23□□□□□ -0.93
SSBP3-211ENST00000528787 ZKSCAN3Q9BRR0 538 aa9.23□□□□□ -0.93
SSBP3-211ENST00000528787 UPF3BQ9BZI7 483 aaKnown RBP9.23□□□□□ -0.93
SSBP3-211ENST00000528787 TANGO6Q9C0B7 1094 aa9.23□□□□□ -0.93
SSBP3-211ENST00000528787 SEC63Q9UGP8 760 aaKnown RBP9.23□□□□□ -0.93
SSBP3-211ENST00000528787 NAP1L2Q9ULW6 460 aaPredicted RBP9.23□□□□□ -0.93
SSBP3-211ENST00000528787 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.23□□□□□ -0.93
SSBP3-211ENST00000528787 CCL15-CCL14A0A0B4J2E2 113 aa9.22□□□□□ -0.93
SSBP3-211ENST00000528787 KLF18A0A0U1RQI7 1052 aa9.22□□□□□ -0.93
SSBP3-211ENST00000528787 GOLGA8AA7E2F4 631 aa9.22□□□□□ -0.93
SSBP3-211ENST00000528787 GOLGA8BA8MQT2 603 aa9.22□□□□□ -0.93
SSBP3-211ENST00000528787 hCG_1984214I3L0E3 225 aa9.22□□□□□ -0.93
SSBP3-211ENST00000528787 HSP90AA1P07900 732 aaKnown RBP9.22□□□□□ -0.93
SSBP3-211ENST00000528787 SNHG28P0DPA3 235 aa9.22□□□□□ -0.93
SSBP3-211ENST00000528787 TM4SF4P48230 202 aa9.22□□□□□ -0.93
SSBP3-211ENST00000528787 OAZ1P54368 228 aa9.22□□□□□ -0.93
SSBP3-211ENST00000528787 HMGCS2P54868 508 aa9.22□□□□□ -0.93
SSBP3-211ENST00000528787 CCNA1P78396 465 aa9.22□□□□□ -0.93
SSBP3-211ENST00000528787 COG2Q14746 738 aa9.22□□□□□ -0.93
SSBP3-211ENST00000528787 GRM4Q14833 912 aa9.22□□□□□ -0.93
SSBP3-211ENST00000528787 CCL15Q16663 113 aa9.22□□□□□ -0.93
SSBP3-211ENST00000528787 RTN1Q16799 776 aa9.22□□□□□ -0.93
SSBP3-211ENST00000528787 APOA5Q6Q788 366 aa9.22□□□□□ -0.93
SSBP3-211ENST00000528787 GADL1Q6ZQY3 521 aa9.22□□□□□ -0.93
SSBP3-211ENST00000528787 MOB2Q70IA6 237 aa9.22□□□□□ -0.93
SSBP3-211ENST00000528787 ZNF713Q8N859 430 aaPredicted RBP9.22□□□□□ -0.93
SSBP3-211ENST00000528787 FANCBQ8NB91 859 aa9.22□□□□□ -0.93
SSBP3-211ENST00000528787 CCDC12Q8WUD4 166 aaPredicted RBP9.22□□□□□ -0.93
SSBP3-211ENST00000528787 NUP133Q8WUM0 1156 aa9.22□□□□□ -0.93
SSBP3-211ENST00000528787 SNX21Q969T3 373 aa9.22□□□□□ -0.93
SSBP3-211ENST00000528787 CLMNQ96JQ2 1002 aa9.22□□□□□ -0.93
SSBP3-211ENST00000528787 LLPHQ9BRT6 129 aaKnown RBP9.22□□□□□ -0.93
SSBP3-211ENST00000528787 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.22□□□□□ -0.93
SSBP3-211ENST00000528787 GLT8D2Q9H1C3 349 aa9.22□□□□□ -0.93
SSBP3-211ENST00000528787 WDR33Q9C0J8 1336 aaKnown RBP9.22□□□□□ -0.93
SSBP3-211ENST00000528787 NID2Q14112 1375 aa9.22□□□□□ -0.93
SSBP3-211ENST00000528787 MYH6P13533 1939 aa9.21□□□□□ -0.93
SSBP3-211ENST00000528787 ZBED4O75132 1171 aa9.21□□□□□ -0.94
SSBP3-211ENST00000528787 FLOT1O75955 427 aa9.21□□□□□ -0.94
SSBP3-211ENST00000528787 NDUFB10O96000 172 aa9.21□□□□□ -0.94
SSBP3-211ENST00000528787 PDHBP11177 359 aa9.21□□□□□ -0.94
SSBP3-211ENST00000528787 VCAM1P19320 739 aa9.21□□□□□ -0.94
SSBP3-211ENST00000528787 AK2P54819 239 aa9.21□□□□□ -0.94
SSBP3-211ENST00000528787 ANTXR2P58335 489 aa9.21□□□□□ -0.94
SSBP3-211ENST00000528787 HMGN5P82970 282 aaKnown RBP9.21□□□□□ -0.94
SSBP3-211ENST00000528787 ZNF543Q08ER8 600 aa9.21□□□□□ -0.94
SSBP3-211ENST00000528787 TROAPQ12815 778 aa9.21□□□□□ -0.94
SSBP3-211ENST00000528787 LBX2Q6XYB7 198 aa9.21□□□□□ -0.94
SSBP3-211ENST00000528787 CHST3Q7LGC8 479 aa9.21□□□□□ -0.94
SSBP3-211ENST00000528787 MICU3Q86XE3 530 aa9.21□□□□□ -0.94
SSBP3-211ENST00000528787 CCAR1Q8IX12 1150 aaKnown RBP9.21□□□□□ -0.94
SSBP3-211ENST00000528787 LRRC47Q8N1G4 583 aaKnown RBP9.21□□□□□ -0.94
SSBP3-211ENST00000528787 SAMD3Q8N6K7 520 aa9.21□□□□□ -0.94
SSBP3-211ENST00000528787 RGS22Q8NE09 1264 aa9.21□□□□□ -0.94
SSBP3-211ENST00000528787 SMCR8Q8TEV9 937 aaPredicted RBP9.21□□□□□ -0.94
SSBP3-211ENST00000528787 RRP36Q96EU6 259 aaKnown RBP9.21□□□□□ -0.94
SSBP3-211ENST00000528787 SLF1Q9BQI6 1058 aa9.21□□□□□ -0.94
SSBP3-211ENST00000528787 SPZ1Q9BXG8 430 aa9.21□□□□□ -0.94
SSBP3-211ENST00000528787 RPAP3Q9H6T3 665 aaPredicted RBP9.21□□□□□ -0.94
SSBP3-211ENST00000528787 ZFYVE28Q9HCC9 887 aa9.21□□□□□ -0.94
SSBP3-211ENST00000528787 INCENPQ9NQS7 918 aa9.21□□□□□ -0.94
SSBP3-211ENST00000528787 SAGE1Q9NXZ1 904 aa9.21□□□□□ -0.94
SSBP3-211ENST00000528787 TMEM232C9JQI7 657 aa9.2□□□□□ -0.94
SSBP3-211ENST00000528787 KLRF2D3W0D1 207 aa9.2□□□□□ -0.94
SSBP3-211ENST00000528787 NMT2O60551 498 aa9.2□□□□□ -0.94
SSBP3-211ENST00000528787 PFKFB2O60825 505 aa9.2□□□□□ -0.94
SSBP3-211ENST00000528787 RRP1BQ14684 758 aaKnown RBP9.2□□□□□ -0.94
SSBP3-211ENST00000528787 ZYXQ15942 572 aaKnown RBP9.2□□□□□ -0.94
SSBP3-211ENST00000528787 TKFCQ3LXA3 575 aa9.2□□□□□ -0.94
SSBP3-211ENST00000528787 MCTP2Q6DN12 878 aa9.2□□□□□ -0.94
SSBP3-211ENST00000528787 BTNL9Q6UXG8 535 aa9.2□□□□□ -0.94
SSBP3-211ENST00000528787 DLK2Q6UY11 383 aa9.2□□□□□ -0.94
SSBP3-211ENST00000528787 CATSPERGQ6ZRH7 1159 aa9.2□□□□□ -0.94
SSBP3-211ENST00000528787 ACER1Q8TDN7 264 aa9.2□□□□□ -0.94
SSBP3-211ENST00000528787 MS4A4AQ96JQ5 239 aa9.2□□□□□ -0.94
SSBP3-211ENST00000528787 EMILIN3Q9NT22 766 aa9.2□□□□□ -0.94
SSBP3-211ENST00000528787 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.2□□□□□ -0.94
SSBP3-211ENST00000528787 FBXO40Q9UH90 709 aa9.2□□□□□ -0.94
SSBP3-211ENST00000528787 A0A1W2PRG0 241 aa9.19□□□□□ -0.94
SSBP3-211ENST00000528787 PALM3A6NDB9 673 aaPredicted RBP9.19□□□□□ -0.94
SSBP3-211ENST00000528787 FAM155AB1AL88 458 aaPredicted RBP9.19□□□□□ -0.94
SSBP3-211ENST00000528787 B4DLN1 442 aa9.19□□□□□ -0.94
SSBP3-211ENST00000528787 K7ELQ4 463 aaPredicted RBP9.19□□□□□ -0.94
SSBP3-211ENST00000528787 PDHXO00330 501 aa9.19□□□□□ -0.94
SSBP3-211ENST00000528787 SLC25A27O95847 323 aa9.19□□□□□ -0.94
SSBP3-211ENST00000528787 PDCP20941 246 aa9.19□□□□□ -0.94
SSBP3-211ENST00000528787 PDIA3P30101 505 aaKnown RBP9.19□□□□□ -0.94
SSBP3-211ENST00000528787 MRPL12P52815 198 aaKnown RBP9.19□□□□□ -0.94
SSBP3-211ENST00000528787 KIF23Q02241 960 aaPredicted RBP9.19□□□□□ -0.94
SSBP3-211ENST00000528787 EVX2Q03828 476 aa9.19□□□□□ -0.94
SSBP3-211ENST00000528787 FMR1Q06787 632 aaKnown RBP eCLIP9.19□□□□□ -0.94
SSBP3-211ENST00000528787 SSRP1Q08945 709 aaKnown RBP9.19□□□□□ -0.94
SSBP3-211ENST00000528787 APOBRQ0VD83 1088 aa9.19□□□□□ -0.94
SSBP3-211ENST00000528787 GRM1Q13255 1194 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms