RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 NUP88Q99567 741 aaPredicted RBP14.19□□□□□ -0.14
TRAF3IP2-211ENST00000528599 NCOA5Q9HCD5 579 aaKnown RBP14.19□□□□□ -0.14
TRAF3IP2-211ENST00000528599 A0A0G2JLL6 359 aaPredicted RBP14.18□□□□□ -0.14
TRAF3IP2-211ENST00000528599 GOLGA8AA7E2F4 631 aa14.18□□□□□ -0.14
TRAF3IP2-211ENST00000528599 C19orf81C9J6K1 198 aa14.18□□□□□ -0.14
TRAF3IP2-211ENST00000528599 CXCL11O14625 94 aa14.18□□□□□ -0.14
TRAF3IP2-211ENST00000528599 GOLGA8HP0CJ92 632 aa14.18□□□□□ -0.14
TRAF3IP2-211ENST00000528599 CALM1P0DP23 149 aa14.18□□□□□ -0.14
TRAF3IP2-211ENST00000528599 CALM2P0DP24 149 aa14.18□□□□□ -0.14
TRAF3IP2-211ENST00000528599 CALM3P0DP25 149 aa14.18□□□□□ -0.14
TRAF3IP2-211ENST00000528599 CDC27P30260 824 aa14.18□□□□□ -0.14
TRAF3IP2-211ENST00000528599 METAP2P50579 478 aaKnown RBP eCLIP14.18□□□□□ -0.14
TRAF3IP2-211ENST00000528599 RCAN1P53805 252 aa14.18□□□□□ -0.14
TRAF3IP2-211ENST00000528599 USP14P54578 494 aa14.18□□□□□ -0.14
TRAF3IP2-211ENST00000528599 KIF23Q02241 960 aaPredicted RBP14.18□□□□□ -0.14
TRAF3IP2-211ENST00000528599 SCRN1Q12765 414 aa14.18□□□□□ -0.14
TRAF3IP2-211ENST00000528599 NOGQ13253 232 aa14.18□□□□□ -0.14
TRAF3IP2-211ENST00000528599 PRRT2Q7Z6L0 340 aaPredicted RBP14.18□□□□□ -0.14
TRAF3IP2-211ENST00000528599 STAG2Q8N3U4 1231 aa14.18□□□□□ -0.14
TRAF3IP2-211ENST00000528599 GMCL1Q96IK5 515 aa14.18□□□□□ -0.14
TRAF3IP2-211ENST00000528599 MAP3K14Q99558 947 aa14.18□□□□□ -0.14
TRAF3IP2-211ENST00000528599 SLKQ9H2G2 1235 aaPredicted RBP14.18□□□□□ -0.14
TRAF3IP2-211ENST00000528599 MAD2L2Q9UI95 211 aa14.18□□□□□ -0.14
TRAF3IP2-211ENST00000528599 NID2Q14112 1375 aa14.18□□□□□ -0.14
TRAF3IP2-211ENST00000528599 K7ELQ4 463 aaPredicted RBP14.17□□□□□ -0.14
TRAF3IP2-211ENST00000528599 ADD1P35611 737 aaKnown RBP14.17□□□□□ -0.14
TRAF3IP2-211ENST00000528599 MAP2K2P36507 400 aa14.17□□□□□ -0.14
TRAF3IP2-211ENST00000528599 SLC1A4P43007 532 aa14.17□□□□□ -0.14
TRAF3IP2-211ENST00000528599 ZNF543Q08ER8 600 aa14.17□□□□□ -0.14
TRAF3IP2-211ENST00000528599 MOGSQ13724 837 aa14.17□□□□□ -0.14
TRAF3IP2-211ENST00000528599 KCTD1Q719H9 257 aa14.17□□□□□ -0.14
TRAF3IP2-211ENST00000528599 HSCBQ8IWL3 235 aa14.17□□□□□ -0.14
TRAF3IP2-211ENST00000528599 DCAF4Q8WV16 495 aa14.17□□□□□ -0.14
TRAF3IP2-211ENST00000528599 GTF3C6Q969F1 213 aa14.17□□□□□ -0.14
TRAF3IP2-211ENST00000528599 C12orf42Q96LP6 360 aa14.17□□□□□ -0.14
TRAF3IP2-211ENST00000528599 SH2B1Q9NRF2 756 aaPredicted RBP14.17□□□□□ -0.14
TRAF3IP2-211ENST00000528599 FRMPD2Q68DX3 1309 aaPredicted RBP14.17□□□□□ -0.14
TRAF3IP2-211ENST00000528599 PTPRFP10586 1907 aa14.17□□□□□ -0.14
TRAF3IP2-211ENST00000528599 PALM3A6NDB9 673 aaPredicted RBP14.17□□□□□ -0.14
TRAF3IP2-211ENST00000528599 DTNBO60941 627 aa14.17□□□□□ -0.14
TRAF3IP2-211ENST00000528599 PARP1P09874 1014 aaKnown RBP14.17□□□□□ -0.14
TRAF3IP2-211ENST00000528599 ZBTB48P10074 688 aaPredicted RBP14.17□□□□□ -0.14
TRAF3IP2-211ENST00000528599 VCAM1P19320 739 aa14.17□□□□□ -0.14
TRAF3IP2-211ENST00000528599 RTN1Q16799 776 aa14.17□□□□□ -0.14
TRAF3IP2-211ENST00000528599 FAM83BQ5T0W9 1011 aa14.17□□□□□ -0.14
TRAF3IP2-211ENST00000528599 TTBK2Q6IQ55 1244 aa14.17□□□□□ -0.14
TRAF3IP2-211ENST00000528599 CTCFLQ8NI51 663 aaPredicted RBP14.17□□□□□ -0.14
TRAF3IP2-211ENST00000528599 LPAR1Q92633 364 aa14.17□□□□□ -0.14
TRAF3IP2-211ENST00000528599 MS4A4AQ96JQ5 239 aa14.17□□□□□ -0.14
TRAF3IP2-211ENST00000528599 GPCPD1Q9NPB8 672 aa14.17□□□□□ -0.14
TRAF3IP2-211ENST00000528599 WBP1LQ9NX94 342 aa14.17□□□□□ -0.14
TRAF3IP2-211ENST00000528599 CENPFP49454 3210 aa14.17□□□□□ -0.14
TRAF3IP2-211ENST00000528599 PLEKHA8P1O95397 391 aa14.16□□□□□ -0.14
TRAF3IP2-211ENST00000528599 BMP3P12645 472 aa14.16□□□□□ -0.14
TRAF3IP2-211ENST00000528599 SNAPC2Q13487 334 aa14.16□□□□□ -0.14
TRAF3IP2-211ENST00000528599 CCDC96Q2M329 555 aa14.16□□□□□ -0.14
TRAF3IP2-211ENST00000528599 SLC35G1Q2M3R5 365 aa14.16□□□□□ -0.14
TRAF3IP2-211ENST00000528599 ASPRV1Q53RT3 343 aa14.16□□□□□ -0.14
TRAF3IP2-211ENST00000528599 CCDC83Q8IWF9 413 aa14.16□□□□□ -0.14
TRAF3IP2-211ENST00000528599 CMTR1Q8N1G2 835 aaKnown RBP14.16□□□□□ -0.14
TRAF3IP2-211ENST00000528599 CPVLQ9H3G5 476 aa14.16□□□□□ -0.14
TRAF3IP2-211ENST00000528599 TMOD4Q9NZQ9 345 aa14.16□□□□□ -0.14
TRAF3IP2-211ENST00000528599 KLRF2D3W0D1 207 aa14.15□□□□□ -0.14
TRAF3IP2-211ENST00000528599 WDR46O15213 610 aaKnown RBP14.15□□□□□ -0.14
TRAF3IP2-211ENST00000528599 HSPA1AP0DMV8 641 aaKnown RBP14.15□□□□□ -0.14
TRAF3IP2-211ENST00000528599 HSPA1BP0DMV9 641 aaKnown RBP14.15□□□□□ -0.14
TRAF3IP2-211ENST00000528599 KIF5BP33176 963 aa14.15□□□□□ -0.14
TRAF3IP2-211ENST00000528599 NTRK3Q16288 839 aa14.15□□□□□ -0.14
TRAF3IP2-211ENST00000528599 TREML2Q5T2D2 321 aa14.15□□□□□ -0.14
TRAF3IP2-211ENST00000528599 GPATCH4Q5T3I0 446 aaKnown RBP14.15□□□□□ -0.14
TRAF3IP2-211ENST00000528599 GADL1Q6ZQY3 521 aa14.15□□□□□ -0.14
TRAF3IP2-211ENST00000528599 TMTC3Q6ZXV5 915 aa14.15□□□□□ -0.14
TRAF3IP2-211ENST00000528599 NBPF11Q86T75 865 aa14.15□□□□□ -0.14
TRAF3IP2-211ENST00000528599 UBA5Q9GZZ9 404 aa14.15□□□□□ -0.14
TRAF3IP2-211ENST00000528599 RPAP3Q9H6T3 665 aaPredicted RBP14.15□□□□□ -0.14
TRAF3IP2-211ENST00000528599 LOC285556D6RIA3 1793 aa14.15□□□□□ -0.15
TRAF3IP2-211ENST00000528599 TMEM232C9JQI7 657 aa14.14□□□□□ -0.15
TRAF3IP2-211ENST00000528599 CTDNEP1O95476 244 aa14.14□□□□□ -0.15
TRAF3IP2-211ENST00000528599 SLC16A2P36021 539 aa14.14□□□□□ -0.15
TRAF3IP2-211ENST00000528599 GTF2A2P52657 109 aa14.14□□□□□ -0.15
TRAF3IP2-211ENST00000528599 FUT2Q10981 343 aa14.14□□□□□ -0.15
TRAF3IP2-211ENST00000528599 CUL4AQ13619 759 aa14.14□□□□□ -0.15
TRAF3IP2-211ENST00000528599 PPP2R5BQ15173 497 aa14.14□□□□□ -0.15
TRAF3IP2-211ENST00000528599 SRBD1Q8N5C6 995 aaKnown RBP14.14□□□□□ -0.15
TRAF3IP2-211ENST00000528599 PROCA1Q8NCQ7 364 aaPredicted RBP14.14□□□□□ -0.15
TRAF3IP2-211ENST00000528599 BRI3BPQ8WY22 251 aa14.14□□□□□ -0.15
TRAF3IP2-211ENST00000528599 FBXO28Q9NVF7 368 aa14.14□□□□□ -0.15
TRAF3IP2-211ENST00000528599 RBM28Q9NW13 759 aaKnown RBP14.14□□□□□ -0.15
TRAF3IP2-211ENST00000528599 ISY1Q9ULR0 285 aaKnown RBP14.14□□□□□ -0.15
TRAF3IP2-211ENST00000528599 HTTP42858 3142 aa14.14□□□□□ -0.15
TRAF3IP2-211ENST00000528599 CCDC196A0A1B0GTZ2 297 aa14.14□□□□□ -0.15
TRAF3IP2-211ENST00000528599 PPFIA3O75145 1194 aa14.14□□□□□ -0.15
TRAF3IP2-211ENST00000528599 CETPP11597 493 aa14.14□□□□□ -0.15
TRAF3IP2-211ENST00000528599 GPAT2Q6NUI2 795 aa14.14□□□□□ -0.15
TRAF3IP2-211ENST00000528599 FASTKD5Q7L8L6 764 aaKnown RBP14.14□□□□□ -0.15
TRAF3IP2-211ENST00000528599 CCDC82Q8N4S0 544 aa14.14□□□□□ -0.15
TRAF3IP2-211ENST00000528599 PTPN18Q99952 460 aa14.14□□□□□ -0.15
TRAF3IP2-211ENST00000528599 TSKSQ9UJT2 592 aa14.14□□□□□ -0.15
TRAF3IP2-211ENST00000528599 CCL15-CCL14A0A0B4J2E2 113 aa14.13□□□□□ -0.15
TRAF3IP2-211ENST00000528599 FOXN1O15353 648 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms