RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 FDPSP14324 419 aaKnown RBP20■□□□□ 0.79
LTBP3-210ENST00000528516 EHD4Q9H223 541 aa20■□□□□ 0.79
LTBP3-210ENST00000528516 KRT9P35527 623 aa19.99■□□□□ 0.79
LTBP3-210ENST00000528516 ZNF654Q8IZM8 581 aa19.99■□□□□ 0.79
LTBP3-210ENST00000528516 CALML4Q96GE6 196 aa19.99■□□□□ 0.79
LTBP3-210ENST00000528516 RILPL1Q5EBL4 403 aa19.99■□□□□ 0.79
LTBP3-210ENST00000528516 XRN1Q8IZH2 1706 aaKnown RBP19.99■□□□□ 0.79
LTBP3-210ENST00000528516 LPIN2Q92539 896 aa19.99■□□□□ 0.79
LTBP3-210ENST00000528516 TBC1D7Q9P0N9 293 aa19.99■□□□□ 0.79
LTBP3-210ENST00000528516 ATP2C2O75185 946 aa19.99■□□□□ 0.79
LTBP3-210ENST00000528516 APOA5Q6Q788 366 aa19.99■□□□□ 0.79
LTBP3-210ENST00000528516 DYMQ7RTS9 669 aa19.99■□□□□ 0.79
LTBP3-210ENST00000528516 GPKOWQ92917 476 aaPredicted RBP eCLIP19.99■□□□□ 0.79
LTBP3-210ENST00000528516 HSD3B7Q9H2F3 369 aa19.99■□□□□ 0.79
LTBP3-210ENST00000528516 SSR1P43307 286 aaKnown RBP19.98■□□□□ 0.79
LTBP3-210ENST00000528516 USPL1Q5W0Q7 1092 aa19.98■□□□□ 0.79
LTBP3-210ENST00000528516 SND1Q7KZF4 910 aaKnown RBP eCLIP19.98■□□□□ 0.79
LTBP3-210ENST00000528516 PEAK1Q9H792 1746 aa19.98■□□□□ 0.79
LTBP3-210ENST00000528516 PSMA7O14818 248 aa19.98■□□□□ 0.79
LTBP3-210ENST00000528516 GNPATO15228 680 aa19.98■□□□□ 0.79
LTBP3-210ENST00000528516 BAG3O95817 575 aa19.98■□□□□ 0.79
LTBP3-210ENST00000528516 CDC27P30260 824 aa19.98■□□□□ 0.79
LTBP3-210ENST00000528516 KIF23Q02241 960 aaPredicted RBP19.98■□□□□ 0.79
LTBP3-210ENST00000528516 FMR1Q06787 632 aaKnown RBP eCLIP19.98■□□□□ 0.79
LTBP3-210ENST00000528516 KAT2BQ92831 832 aa19.98■□□□□ 0.79
LTBP3-210ENST00000528516 CABS1Q96KC9 395 aa19.98■□□□□ 0.79
LTBP3-210ENST00000528516 ECM2O94769 699 aaPredicted RBP19.98■□□□□ 0.79
LTBP3-210ENST00000528516 CTSWP56202 376 aa19.98■□□□□ 0.79
LTBP3-210ENST00000528516 SHC4Q6S5L8 630 aa19.98■□□□□ 0.79
LTBP3-210ENST00000528516 DTHD1Q6ZMT9 781 aa19.98■□□□□ 0.79
LTBP3-210ENST00000528516 TAF4BQ92750 862 aa19.98■□□□□ 0.79
LTBP3-210ENST00000528516 TMEM87BQ96K49 555 aa19.98■□□□□ 0.79
LTBP3-210ENST00000528516 GPCPD1Q9NPB8 672 aa19.98■□□□□ 0.79
LTBP3-210ENST00000528516 DONSONQ9NYP3 566 aa19.98■□□□□ 0.79
LTBP3-210ENST00000528516 TXKP42681 527 aa19.97■□□□□ 0.79
LTBP3-210ENST00000528516 PAFAH1B1P43034 410 aa19.97■□□□□ 0.79
LTBP3-210ENST00000528516 ATP1A2P50993 1020 aa19.97■□□□□ 0.79
LTBP3-210ENST00000528516 METTL16Q86W50 562 aaKnown RBP19.97■□□□□ 0.79
LTBP3-210ENST00000528516 MAPKAPK5Q8IW41 473 aa19.97■□□□□ 0.79
LTBP3-210ENST00000528516 ZSWIM5Q9P217 1185 aa19.97■□□□□ 0.79
LTBP3-210ENST00000528516 DEXIO95424 95 aa19.97■□□□□ 0.79
LTBP3-210ENST00000528516 POLD4Q9HCU8 107 aa19.97■□□□□ 0.79
LTBP3-210ENST00000528516 TUBE1Q9UJT0 475 aa19.97■□□□□ 0.79
LTBP3-210ENST00000528516 DYNLL1P63167 89 aaKnown RBP19.97■□□□□ 0.79
LTBP3-210ENST00000528516 CNGA4Q8IV77 575 aa19.97■□□□□ 0.79
LTBP3-210ENST00000528516 MAN1B1Q9UKM7 699 aa19.97■□□□□ 0.79
LTBP3-210ENST00000528516 PIK3C2AO00443 1686 aa19.97■□□□□ 0.79
LTBP3-210ENST00000528516 SRGAP2O75044 1071 aa19.96■□□□□ 0.79
LTBP3-210ENST00000528516 CCDC122Q5T0U0 273 aa19.96■□□□□ 0.79
LTBP3-210ENST00000528516 MLKLQ8NB16 471 aa19.96■□□□□ 0.79
LTBP3-210ENST00000528516 HDAC6Q9UBN7 1215 aa19.96■□□□□ 0.79
LTBP3-210ENST00000528516 LUC7L2Q9Y383 392 aaKnown RBP19.96■□□□□ 0.79
LTBP3-210ENST00000528516 TNKSO95271 1327 aa19.96■□□□□ 0.79
LTBP3-210ENST00000528516 FRMD3A2A2Y4 597 aa19.96■□□□□ 0.79
LTBP3-210ENST00000528516 MYO1FO00160 1098 aa19.96■□□□□ 0.79
LTBP3-210ENST00000528516 NEBLO76041 1014 aa19.96■□□□□ 0.79
LTBP3-210ENST00000528516 MMP14P50281 582 aa19.96■□□□□ 0.79
LTBP3-210ENST00000528516 NOSTRINQ8IVI9 506 aa19.96■□□□□ 0.79
LTBP3-210ENST00000528516 PDE8BO95263 885 aa19.96■□□□□ 0.79
LTBP3-210ENST00000528516 IRAK1P51617 712 aa19.96■□□□□ 0.79
LTBP3-210ENST00000528516 PLS1Q14651 629 aa19.96■□□□□ 0.79
LTBP3-210ENST00000528516 TTC38Q5R3I4 469 aa19.96■□□□□ 0.79
LTBP3-210ENST00000528516 SWT1Q5T5J6 900 aaKnown RBP19.96■□□□□ 0.79
LTBP3-210ENST00000528516 DENND2AQ9ULE3 1009 aa19.96■□□□□ 0.79
LTBP3-210ENST00000528516 SPATA31A3Q5VYP0 1347 aa19.96■□□□□ 0.79
LTBP3-210ENST00000528516 TBC1D8BQ0IIM8 1120 aa19.96■□□□□ 0.79
LTBP3-210ENST00000528516 TMEM266Q2M3C6 531 aa19.96■□□□□ 0.79
LTBP3-210ENST00000528516 CCDC42Q96M95 316 aa19.96■□□□□ 0.79
LTBP3-210ENST00000528516 GOPCQ9HD26 462 aa19.96■□□□□ 0.79
LTBP3-210ENST00000528516 NALCNQ8IZF0 1738 aa19.95■□□□□ 0.78
LTBP3-210ENST00000528516 GOLGA6L10A6NI86 522 aa19.95■□□□□ 0.78
LTBP3-210ENST00000528516 USO1O60763 962 aaKnown RBP19.95■□□□□ 0.78
LTBP3-210ENST00000528516 TFAP4Q01664 338 aa19.95■□□□□ 0.78
LTBP3-210ENST00000528516 NAA15Q9BXJ9 866 aaKnown RBP19.95■□□□□ 0.78
LTBP3-210ENST00000528516 HPCAL4Q9UM19 191 aa19.95■□□□□ 0.78
LTBP3-210ENST00000528516 MRPS25P82663 173 aaKnown RBP19.95■□□□□ 0.78
LTBP3-210ENST00000528516 FAM98CQ17RN3 349 aaKnown RBP19.95■□□□□ 0.78
LTBP3-210ENST00000528516 FANCBQ8NB91 859 aa19.95■□□□□ 0.78
LTBP3-210ENST00000528516 N4BP2L2Q92802 583 aaPredicted RBP19.95■□□□□ 0.78
LTBP3-210ENST00000528516 PIH1D3Q9NQM4 214 aaKnown RBP19.95■□□□□ 0.78
LTBP3-210ENST00000528516 BAZ2BQ9UIF8 2168 aaKnown RBP19.95■□□□□ 0.78
LTBP3-210ENST00000528516 CHD2O14647 1828 aaKnown RBP19.95■□□□□ 0.78
LTBP3-210ENST00000528516 BRD2P25440 801 aaKnown RBP19.95■□□□□ 0.78
LTBP3-210ENST00000528516 ANKRD13CQ8N6S4 541 aa19.95■□□□□ 0.78
LTBP3-210ENST00000528516 SCLT1Q96NL6 688 aa19.95■□□□□ 0.78
LTBP3-210ENST00000528516 PANX2Q96RD6 677 aa19.95■□□□□ 0.78
LTBP3-210ENST00000528516 PPFIA1Q13136 1202 aa19.94■□□□□ 0.78
LTBP3-210ENST00000528516 ZBTB38Q8NAP3 1195 aaPredicted RBP19.94■□□□□ 0.78
LTBP3-210ENST00000528516 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.94■□□□□ 0.78
LTBP3-210ENST00000528516 NBPF26B4DH59 902 aa19.94■□□□□ 0.78
LTBP3-210ENST00000528516 NBPF14Q5TI25 921 aa19.94■□□□□ 0.78
LTBP3-210ENST00000528516 LRCH2Q5VUJ6 765 aa19.94■□□□□ 0.78
LTBP3-210ENST00000528516 KCTD16Q68DU8 428 aa19.94■□□□□ 0.78
LTBP3-210ENST00000528516 NBPF10Q6P3W6 841 aaKnown RBP19.94■□□□□ 0.78
LTBP3-210ENST00000528516 B4GALNT4Q76KP1 1039 aa19.94■□□□□ 0.78
LTBP3-210ENST00000528516 NBPF15Q8N660 670 aa19.94■□□□□ 0.78
LTBP3-210ENST00000528516 COG1Q8WTW3 980 aa19.94■□□□□ 0.78
LTBP3-210ENST00000528516 MCAMP43121 646 aa19.93■□□□□ 0.78
LTBP3-210ENST00000528516 MICALCLQ6ZW33 695 aa19.93■□□□□ 0.78
LTBP3-210ENST00000528516 LUC7LQ9NQ29 371 aaKnown RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms