RNA–Protein interactions for RNA: ENST00000528462.5

PACSIN3-205, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 2

Gene PACSIN3, Length 1,560 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-205ENST00000528462 ZYXQ15942 572 aaKnown RBP25.65■■□□□ 1.7
PACSIN3-205ENST00000528462 RTN1Q16799 776 aa25.65■■□□□ 1.7
PACSIN3-205ENST00000528462 GTF3C6Q969F1 213 aa25.65■■□□□ 1.7
PACSIN3-205ENST00000528462 TMOD4Q9NZQ9 345 aa25.65■■□□□ 1.7
PACSIN3-205ENST00000528462 RASSF10A6NK89 507 aa25.65■■□□□ 1.7
PACSIN3-205ENST00000528462 DHX16O60231 1041 aaKnown RBP25.65■■□□□ 1.7
PACSIN3-205ENST00000528462 SLC10A3P09131 477 aa25.65■■□□□ 1.7
PACSIN3-205ENST00000528462 BMP3P12645 472 aa25.65■■□□□ 1.7
PACSIN3-205ENST00000528462 VCAM1P19320 739 aa25.65■■□□□ 1.7
PACSIN3-205ENST00000528462 RXRAP19793 462 aa25.65■■□□□ 1.7
PACSIN3-205ENST00000528462 GNAQP50148 359 aa25.65■■□□□ 1.7
PACSIN3-205ENST00000528462 GTF2A2P52657 109 aa25.65■■□□□ 1.7
PACSIN3-205ENST00000528462 SCRN1Q12765 414 aa25.65■■□□□ 1.7
PACSIN3-205ENST00000528462 SPICE1Q8N0Z3 855 aa25.65■■□□□ 1.7
PACSIN3-205ENST00000528462 MS4A4AQ96JQ5 239 aa25.65■■□□□ 1.7
PACSIN3-205ENST00000528462 PLA2G6O60733 806 aa25.64■■□□□ 1.69
PACSIN3-205ENST00000528462 FASTKD5Q7L8L6 764 aaKnown RBP25.64■■□□□ 1.69
PACSIN3-205ENST00000528462 LZTS2Q9BRK4 669 aa25.64■■□□□ 1.69
PACSIN3-205ENST00000528462 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.64■■□□□ 1.69
PACSIN3-205ENST00000528462 SMARCA1P28370 1054 aa25.63■■□□□ 1.69
PACSIN3-205ENST00000528462 CDC27P30260 824 aa25.63■■□□□ 1.69
PACSIN3-205ENST00000528462 MOGSQ13724 837 aa25.63■■□□□ 1.69
PACSIN3-205ENST00000528462 BECN1Q14457 450 aa25.63■■□□□ 1.69
PACSIN3-205ENST00000528462 RASGRP2Q7LDG7 609 aa25.63■■□□□ 1.69
PACSIN3-205ENST00000528462 RAB11FIP4Q86YS3 637 aa25.63■■□□□ 1.69
PACSIN3-205ENST00000528462 MTMR7Q9Y216 660 aa25.63■■□□□ 1.69
PACSIN3-205ENST00000528462 FAM155AB1AL88 458 aaPredicted RBP25.62■■□□□ 1.69
PACSIN3-205ENST00000528462 RAD21O60216 631 aa25.62■■□□□ 1.69
PACSIN3-205ENST00000528462 CETPP11597 493 aa25.62■■□□□ 1.69
PACSIN3-205ENST00000528462 CCT2P78371 535 aaKnown RBP25.62■■□□□ 1.69
PACSIN3-205ENST00000528462 STK3Q13188 491 aa25.62■■□□□ 1.69
PACSIN3-205ENST00000528462 CUL4AQ13619 759 aa25.62■■□□□ 1.69
PACSIN3-205ENST00000528462 CCDC144CPQ8IYA2 1237 aa25.62■■□□□ 1.69
PACSIN3-205ENST00000528462 NCOA5Q9HCD5 579 aaKnown RBP25.62■■□□□ 1.69
PACSIN3-205ENST00000528462 ADD1P35611 737 aaKnown RBP25.61■■□□□ 1.69
PACSIN3-205ENST00000528462 NTRK3Q16288 839 aa25.61■■□□□ 1.69
PACSIN3-205ENST00000528462 BTNL9Q6UXG8 535 aa25.61■■□□□ 1.69
PACSIN3-205ENST00000528462 TMTC3Q6ZXV5 915 aa25.61■■□□□ 1.69
PACSIN3-205ENST00000528462 STAG2Q8N3U4 1231 aa25.61■■□□□ 1.69
PACSIN3-205ENST00000528462 NECAB1Q8N987 351 aa25.61■■□□□ 1.69
PACSIN3-205ENST00000528462 LOC285556D6RIA3 1793 aa25.61■■□□□ 1.69
PACSIN3-205ENST00000528462 TESPA1A2RU30 521 aaPredicted RBP25.61■■□□□ 1.69
PACSIN3-205ENST00000528462 KLRF2D3W0D1 207 aa25.61■■□□□ 1.69
PACSIN3-205ENST00000528462 ST3GAL1Q11201 340 aa25.61■■□□□ 1.69
PACSIN3-205ENST00000528462 DGKZQ13574 1117 aa25.61■■□□□ 1.69
PACSIN3-205ENST00000528462 CCDC96Q2M329 555 aa25.61■■□□□ 1.69
PACSIN3-205ENST00000528462 FAM83BQ5T0W9 1011 aa25.61■■□□□ 1.69
PACSIN3-205ENST00000528462 KCTD1Q719H9 257 aa25.61■■□□□ 1.69
PACSIN3-205ENST00000528462 NUP88Q99567 741 aaPredicted RBP25.61■■□□□ 1.69
PACSIN3-205ENST00000528462 HOXA7P31268 230 aaPredicted RBP25.6■■□□□ 1.69
PACSIN3-205ENST00000528462 FUT2Q10981 343 aa25.6■■□□□ 1.69
PACSIN3-205ENST00000528462 CPLX2Q6PUV4 134 aaKnown RBP25.6■■□□□ 1.69
PACSIN3-205ENST00000528462 LLPHQ9BRT6 129 aaKnown RBP25.6■■□□□ 1.69
PACSIN3-205ENST00000528462 FEM1BQ9UK73 627 aa25.6■■□□□ 1.69
PACSIN3-205ENST00000528462 AGTPBP1Q9UPW5 1226 aa25.6■■□□□ 1.69
PACSIN3-205ENST00000528462 FRMPD2Q68DX3 1309 aaPredicted RBP25.59■■□□□ 1.69
PACSIN3-205ENST00000528462 MANSC4A6NHS7 340 aaPredicted RBP25.59■■□□□ 1.69
PACSIN3-205ENST00000528462 CPLX1O14810 134 aa25.59■■□□□ 1.69
PACSIN3-205ENST00000528462 GOLGA8HP0CJ92 632 aa25.59■■□□□ 1.69
PACSIN3-205ENST00000528462 IFNAR1P17181 557 aa25.59■■□□□ 1.69
PACSIN3-205ENST00000528462 STAT2P52630 851 aa25.59■■□□□ 1.69
PACSIN3-205ENST00000528462 DEFB115Q30KQ5 88 aa25.59■■□□□ 1.69
PACSIN3-205ENST00000528462 CHURC1Q8WUH1 139 aa25.59■■□□□ 1.69
PACSIN3-205ENST00000528462 SPZ1Q9BXG8 430 aa25.59■■□□□ 1.69
PACSIN3-205ENST00000528462 RPAP3Q9H6T3 665 aaPredicted RBP25.59■■□□□ 1.69
PACSIN3-205ENST00000528462 INHBEP58166 350 aa25.58■■□□□ 1.69
PACSIN3-205ENST00000528462 FAM160B2Q86V87 743 aa25.58■■□□□ 1.69
PACSIN3-205ENST00000528462 SRBD1Q8N5C6 995 aaKnown RBP25.58■■□□□ 1.69
PACSIN3-205ENST00000528462 INTS4Q96HW7 963 aaKnown RBP25.58■■□□□ 1.69
PACSIN3-205ENST00000528462 SLC45A1Q9Y2W3 748 aa25.58■■□□□ 1.69
PACSIN3-205ENST00000528462 USP17L15C9J2P7 530 aa25.57■■□□□ 1.68
PACSIN3-205ENST00000528462 USP17L13C9JLJ4 530 aa25.57■■□□□ 1.68
PACSIN3-205ENST00000528462 TMEM232C9JQI7 657 aa25.57■■□□□ 1.68
PACSIN3-205ENST00000528462 USP17L11C9JVI0 530 aa25.57■■□□□ 1.68
PACSIN3-205ENST00000528462 USP17L18D6R9N7 530 aa25.57■■□□□ 1.68
PACSIN3-205ENST00000528462 USP17L22D6RA61 530 aa25.57■■□□□ 1.68
PACSIN3-205ENST00000528462 USP17L17D6RBQ6 530 aa25.57■■□□□ 1.68
PACSIN3-205ENST00000528462 USP17L19D6RCP7 530 aa25.57■■□□□ 1.68
PACSIN3-205ENST00000528462 USP17L20D6RJB6 530 aa25.57■■□□□ 1.68
PACSIN3-205ENST00000528462 CDKL5O76039 1030 aa25.57■■□□□ 1.68
PACSIN3-205ENST00000528462 PLEKHA8P1O95397 391 aa25.57■■□□□ 1.68
PACSIN3-205ENST00000528462 USP17L24Q0WX57 530 aa25.57■■□□□ 1.68
PACSIN3-205ENST00000528462 GPAT2Q6NUI2 795 aa25.57■■□□□ 1.68
PACSIN3-205ENST00000528462 CATSPERGQ6ZRH7 1159 aa25.57■■□□□ 1.68
PACSIN3-205ENST00000528462 CCDC83Q8IWF9 413 aa25.57■■□□□ 1.68
PACSIN3-205ENST00000528462 BRI3BPQ8WY22 251 aa25.57■■□□□ 1.68
PACSIN3-205ENST00000528462 RIOX1Q9H6W3 641 aa25.57■■□□□ 1.68
PACSIN3-205ENST00000528462 GPCPD1Q9NPB8 672 aa25.57■■□□□ 1.68
PACSIN3-205ENST00000528462 CCL15-CCL14A0A0B4J2E2 113 aa25.56■■□□□ 1.68
PACSIN3-205ENST00000528462 CCL15Q16663 113 aa25.56■■□□□ 1.68
PACSIN3-205ENST00000528462 TREML2Q5T2D2 321 aa25.56■■□□□ 1.68
PACSIN3-205ENST00000528462 TTBK2Q6IQ55 1244 aa25.56■■□□□ 1.68
PACSIN3-205ENST00000528462 GADL1Q6ZQY3 521 aa25.56■■□□□ 1.68
PACSIN3-205ENST00000528462 MYPNQ86TC9 1320 aa25.56■■□□□ 1.68
PACSIN3-205ENST00000528462 CYTH3O43739 400 aa25.56■■□□□ 1.68
PACSIN3-205ENST00000528462 CTDNEP1O95476 244 aa25.56■■□□□ 1.68
PACSIN3-205ENST00000528462 MKRN3Q13064 507 aaKnown RBP25.56■■□□□ 1.68
PACSIN3-205ENST00000528462 NOGQ13253 232 aa25.56■■□□□ 1.68
PACSIN3-205ENST00000528462 PABPC4Q13310 644 aaKnown RBP eCLIP25.56■■□□□ 1.686e-8■■■■■ 34.2
PACSIN3-205ENST00000528462 SLC35G1Q2M3R5 365 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms