RNA–Protein interactions for RNA: ENST00000528267.1

SCN3B-205, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-205ENST00000528267 ANKRD13CQ8N6S4 541 aa15.15■□□□□ 0.02
SCN3B-205ENST00000528267 ATG4CQ96DT6 458 aa15.15■□□□□ 0.02
SCN3B-205ENST00000528267 LRRC2Q9BYS8 371 aa15.15■□□□□ 0.02
SCN3B-205ENST00000528267 BTBD7Q9P203 1132 aa15.15■□□□□ 0.02
SCN3B-205ENST00000528267 MTMR7Q9Y216 660 aa15.15■□□□□ 0.02
SCN3B-205ENST00000528267 SH2B2O14492 632 aaPredicted RBP15.14■□□□□ 0.01
SCN3B-205ENST00000528267 EPB41L2O43491 1005 aaKnown RBP15.14■□□□□ 0.01
SCN3B-205ENST00000528267 PRC1O43663 620 aa15.14■□□□□ 0.01
SCN3B-205ENST00000528267 ECM2O94769 699 aaPredicted RBP15.14■□□□□ 0.01
SCN3B-205ENST00000528267 PDHBP11177 359 aa15.14■□□□□ 0.01
SCN3B-205ENST00000528267 DSG3P32926 999 aa15.14■□□□□ 0.01
SCN3B-205ENST00000528267 IRX3P78415 501 aaPredicted RBP15.14■□□□□ 0.01
SCN3B-205ENST00000528267 EXOSC10Q01780 885 aaKnown RBP15.14■□□□□ 0.01
SCN3B-205ENST00000528267 PABPC4Q13310 644 aaKnown RBP eCLIP15.14■□□□□ 0.01
SCN3B-205ENST00000528267 TTBK2Q6IQ55 1244 aa15.14■□□□□ 0.01
SCN3B-205ENST00000528267 LBX2Q6XYB7 198 aa15.14■□□□□ 0.01
SCN3B-205ENST00000528267 KCTD1Q719H9 257 aa15.14■□□□□ 0.01
SCN3B-205ENST00000528267 IQCA1Q86XH1 822 aa15.14■□□□□ 0.01
SCN3B-205ENST00000528267 REPS2Q8NFH8 660 aa15.14■□□□□ 0.01
SCN3B-205ENST00000528267 CD99L2Q8TCZ2 262 aa15.14■□□□□ 0.01
SCN3B-205ENST00000528267 SMCR8Q8TEV9 937 aaPredicted RBP15.14■□□□□ 0.01
SCN3B-205ENST00000528267 GMCL1Q96IK5 515 aa15.14■□□□□ 0.01
SCN3B-205ENST00000528267 TTC14Q96N46 770 aa15.14■□□□□ 0.01
SCN3B-205ENST00000528267 NEK1Q96PY6 1258 aa15.14■□□□□ 0.01
SCN3B-205ENST00000528267 TANGO6Q9C0B7 1094 aa15.14■□□□□ 0.01
SCN3B-205ENST00000528267 LY9Q9HBG7 655 aa15.14■□□□□ 0.01
SCN3B-205ENST00000528267 PNMA3Q9UL41 463 aa15.14■□□□□ 0.01
SCN3B-205ENST00000528267 FRMPD2Q68DX3 1309 aaPredicted RBP15.14■□□□□ 0.01
SCN3B-205ENST00000528267 FLOT1O75955 427 aa15.13■□□□□ 0.01
SCN3B-205ENST00000528267 CENPFP49454 3210 aa15.13■□□□□ 0.01
SCN3B-205ENST00000528267 TRDNQ13061 729 aa15.13■□□□□ 0.01
SCN3B-205ENST00000528267 RNF20Q5VTR2 975 aa15.13■□□□□ 0.01
SCN3B-205ENST00000528267 PNMA1Q8ND90 353 aa15.13■□□□□ 0.01
SCN3B-205ENST00000528267 MORF4L1Q9UBU8 362 aa15.13■□□□□ 0.01
SCN3B-205ENST00000528267 PPP1R9AQ9ULJ8 1098 aa15.13■□□□□ 0.01
SCN3B-205ENST00000528267 ADAMTS5Q9UNA0 930 aa15.13■□□□□ 0.01
SCN3B-205ENST00000528267 IFIT3O14879 490 aaKnown RBP15.12■□□□□ 0.01
SCN3B-205ENST00000528267 FKTNO75072 461 aa15.12■□□□□ 0.01
SCN3B-205ENST00000528267 BMP3P12645 472 aa15.12■□□□□ 0.01
SCN3B-205ENST00000528267 LACTBP83111 547 aaPredicted RBP15.12■□□□□ 0.01
SCN3B-205ENST00000528267 SP3Q02447 781 aa15.12■□□□□ 0.01
SCN3B-205ENST00000528267 COG2Q14746 738 aa15.12■□□□□ 0.01
SCN3B-205ENST00000528267 FAM110CQ1W6H9 321 aa15.12■□□□□ 0.01
SCN3B-205ENST00000528267 SLC35G1Q2M3R5 365 aa15.12■□□□□ 0.01
SCN3B-205ENST00000528267 JAKMIP1Q96N16 626 aaKnown RBP15.12■□□□□ 0.01
SCN3B-205ENST00000528267 UBAC1Q9BSL1 405 aa15.12■□□□□ 0.01
SCN3B-205ENST00000528267 CPVLQ9H3G5 476 aa15.12■□□□□ 0.01
SCN3B-205ENST00000528267 PRDM10Q9NQV6 1147 aa15.12■□□□□ 0.01
SCN3B-205ENST00000528267 GOLGA8HP0CJ92 632 aa15.11■□□□□ 0.01
SCN3B-205ENST00000528267 TAL1P17542 331 aaPredicted RBP15.11■□□□□ 0.01
SCN3B-205ENST00000528267 SLC1A4P43007 532 aa15.11■□□□□ 0.01
SCN3B-205ENST00000528267 ERVK-9P63128 1117 aa15.11■□□□□ 0.01
SCN3B-205ENST00000528267 ERVK-24P63145 666 aa15.11■□□□□ 0.01
SCN3B-205ENST00000528267 TMEM132BQ14DG7 1078 aa15.11■□□□□ 0.01
SCN3B-205ENST00000528267 TMEM67Q5HYA8 995 aa15.11■□□□□ 0.01
SCN3B-205ENST00000528267 PPP4R3BQ5MIZ7 849 aa15.11■□□□□ 0.01
SCN3B-205ENST00000528267 IFIT1BQ5T764 474 aaKnown RBP15.11■□□□□ 0.01
SCN3B-205ENST00000528267 COL13A1Q5TAT6 717 aaPredicted RBP15.11■□□□□ 0.01
SCN3B-205ENST00000528267 SAMD1Q6SPF0 538 aaPredicted RBP15.11■□□□□ 0.01
SCN3B-205ENST00000528267 DCAF4Q8WV16 495 aa15.11■□□□□ 0.01
SCN3B-205ENST00000528267 PAGR1Q9BTK6 254 aa15.11■□□□□ 0.01
SCN3B-205ENST00000528267 PORCNQ9H237 461 aa15.11■□□□□ 0.01
SCN3B-205ENST00000528267 MYPNQ86TC9 1320 aa15.11■□□□□ 0.01
SCN3B-205ENST00000528267 TMEM232C9JQI7 657 aa15.1■□□□□ 0.01
SCN3B-205ENST00000528267 ZKSCAN1P17029 563 aaPredicted RBP15.1■□□□□ 0.01
SCN3B-205ENST00000528267 MCM5P33992 734 aa15.1■□□□□ 0.01
SCN3B-205ENST00000528267 SLC16A2P36021 539 aa15.1■□□□□ 0.01
SCN3B-205ENST00000528267 GCLCP48506 637 aaPredicted RBP15.1■□□□□ 0.01
SCN3B-205ENST00000528267 SNAP25P60880 206 aa15.1■□□□□ 0.01
SCN3B-205ENST00000528267 ZNF543Q08ER8 600 aa15.1■□□□□ 0.01
SCN3B-205ENST00000528267 TROAPQ12815 778 aa15.1■□□□□ 0.01
SCN3B-205ENST00000528267 WTAPQ15007 396 aa15.1■□□□□ 0.01
SCN3B-205ENST00000528267 CCDC178Q5BJE1 867 aa15.1■□□□□ 0.01
SCN3B-205ENST00000528267 STAG2Q8N3U4 1231 aa15.1■□□□□ 0.01
SCN3B-205ENST00000528267 IL17RAQ96F46 866 aa15.1■□□□□ 0.01
SCN3B-205ENST00000528267 TRIM47Q96LD4 638 aa15.1■□□□□ 0.01
SCN3B-205ENST00000528267 SLF1Q9BQI6 1058 aa15.1■□□□□ 0.01
SCN3B-205ENST00000528267 MYL10Q9BUA6 226 aa15.1■□□□□ 0.01
SCN3B-205ENST00000528267 KAT14Q9H8E8 782 aa15.1■□□□□ 0.01
SCN3B-205ENST00000528267 GPCPD1Q9NPB8 672 aa15.1■□□□□ 0.01
SCN3B-205ENST00000528267 ZNF214Q9UL59 606 aaPredicted RBP15.1■□□□□ 0.01
SCN3B-205ENST00000528267 LCTP09848 1927 aa15.09■□□□□ 0.01
SCN3B-205ENST00000528267 VWA5AO00534 786 aa15.09■□□□□ 0.01
SCN3B-205ENST00000528267 KRT32Q14532 448 aa15.09■□□□□ 0.01
SCN3B-205ENST00000528267 CCDC96Q2M329 555 aa15.09■□□□□ 0.01
SCN3B-205ENST00000528267 BTNL9Q6UXG8 535 aa15.09■□□□□ 0.01
SCN3B-205ENST00000528267 DHX32Q7L7V1 743 aaKnown RBP15.09■□□□□ 0.01
SCN3B-205ENST00000528267 RAB11FIP4Q86YS3 637 aa15.09■□□□□ 0.01
SCN3B-205ENST00000528267 KIFC2Q96AC6 838 aa15.09■□□□□ 0.01
SCN3B-205ENST00000528267 EFCC1Q9HA90 598 aa15.09■□□□□ 0.01
SCN3B-205ENST00000528267 MAD2L2Q9UI95 211 aa15.09■□□□□ 0.01
SCN3B-205ENST00000528267 BRPF3Q9ULD4 1205 aa15.09■□□□□ 0.01
SCN3B-205ENST00000528267 PRR12Q9ULL5 1215 aa15.09■□□□□ 0.01
SCN3B-205ENST00000528267 RABGAP1Q9Y3P9 1069 aa15.09■□□□□ 0.01
SCN3B-205ENST00000528267 ZNF536O15090 1300 aa15.09■□□□□ 0.01
SCN3B-205ENST00000528267 WDR19Q8NEZ3 1342 aa15.09■□□□□ 0.01
SCN3B-205ENST00000528267 ZNF236Q9UL36 1845 aa15.08■□□□□ 0.01
SCN3B-205ENST00000528267 MYH6P13533 1939 aa15.08■□□□□ 0
SCN3B-205ENST00000528267 ZNFX1Q9P2E3 1918 aaKnown RBP15.08■□□□□ 0
SCN3B-205ENST00000528267 PLA2G6O60733 806 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms