RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 CYBAP13498 195 aa26.78■■□□□ 1.88
TRAPPC4-208ENST00000527680 LRRFIP1Q32MZ4 808 aaKnown RBP26.78■■□□□ 1.88
TRAPPC4-208ENST00000527680 ANO1Q5XXA6 986 aa26.78■■□□□ 1.88
TRAPPC4-208ENST00000527680 GIMAP6Q6P9H5 292 aa26.78■■□□□ 1.88
TRAPPC4-208ENST00000527680 ABRAQ8N0Z2 381 aa26.78■■□□□ 1.88
TRAPPC4-208ENST00000527680 ARRDC4Q8NCT1 418 aa26.78■■□□□ 1.88
TRAPPC4-208ENST00000527680 LRCH3Q96II8 777 aa26.78■■□□□ 1.88
TRAPPC4-208ENST00000527680 ATN1P54259 1190 aaPredicted RBP26.77■■□□□ 1.88
TRAPPC4-208ENST00000527680 PRAMEF19Q5SWL8 479 aa26.77■■□□□ 1.88
TRAPPC4-208ENST00000527680 FAM83BQ5T0W9 1011 aa26.77■■□□□ 1.88
TRAPPC4-208ENST00000527680 GJC2Q5T442 439 aaPredicted RBP26.77■■□□□ 1.88
TRAPPC4-208ENST00000527680 SZT2Q5T011 3432 aa26.76■■□□□ 1.87
TRAPPC4-208ENST00000527680 GNAT2P19087 354 aa26.76■■□□□ 1.87
TRAPPC4-208ENST00000527680 STAT3P40763 770 aa26.76■■□□□ 1.87
TRAPPC4-208ENST00000527680 TDO2P48775 406 aa26.76■■□□□ 1.87
TRAPPC4-208ENST00000527680 ZNF444Q8N0Y2 327 aaPredicted RBP26.76■■□□□ 1.87
TRAPPC4-208ENST00000527680 MMP19Q99542 508 aa26.76■■□□□ 1.87
TRAPPC4-208ENST00000527680 ZNFX1Q9P2E3 1918 aaKnown RBP26.76■■□□□ 1.87
TRAPPC4-208ENST00000527680 DNM1LO00429 736 aa26.75■■□□□ 1.87
TRAPPC4-208ENST00000527680 GPAA1O43292 621 aa26.75■■□□□ 1.87
TRAPPC4-208ENST00000527680 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.75■■□□□ 1.87
TRAPPC4-208ENST00000527680 ZNF287Q9HBT7 754 aa26.75■■□□□ 1.87
TRAPPC4-208ENST00000527680 PPP1R9AQ9ULJ8 1098 aa26.75■■□□□ 1.87
TRAPPC4-208ENST00000527680 ADAMTS5Q9UNA0 930 aa26.75■■□□□ 1.87
TRAPPC4-208ENST00000527680 VWA5AO00534 786 aa26.74■■□□□ 1.87
TRAPPC4-208ENST00000527680 ERC2O15083 957 aa26.74■■□□□ 1.87
TRAPPC4-208ENST00000527680 SEPT4O43236 478 aa26.74■■□□□ 1.87
TRAPPC4-208ENST00000527680 IGHA2P01877 340 aa26.74■■□□□ 1.87
TRAPPC4-208ENST00000527680 RASA1P20936 1047 aa26.74■■□□□ 1.87
TRAPPC4-208ENST00000527680 MDM2Q00987 491 aaPredicted RBP26.74■■□□□ 1.87
TRAPPC4-208ENST00000527680 KCTD2Q14681 263 aa26.74■■□□□ 1.87
TRAPPC4-208ENST00000527680 RIOX2Q8IUF8 465 aa26.74■■□□□ 1.87
TRAPPC4-208ENST00000527680 TDHQ8IZJ6 230 aa26.74■■□□□ 1.87
TRAPPC4-208ENST00000527680 MAML3Q96JK9 1138 aa26.74■■□□□ 1.87
TRAPPC4-208ENST00000527680 CLIP2Q9UDT6 1046 aa26.74■■□□□ 1.87
TRAPPC4-208ENST00000527680 KBTBD13C9JR72 458 aa26.73■■□□□ 1.87
TRAPPC4-208ENST00000527680 NUP88Q99567 741 aaPredicted RBP26.73■■□□□ 1.87
TRAPPC4-208ENST00000527680 LBHD1Q9BQE6 289 aaPredicted RBP26.73■■□□□ 1.87
TRAPPC4-208ENST00000527680 NYAP2Q9P242 653 aa26.73■■□□□ 1.87
TRAPPC4-208ENST00000527680 PRKAG2Q9UGJ0 569 aa26.73■■□□□ 1.87
TRAPPC4-208ENST00000527680 FRMPD3Q5JV73 1810 aa26.73■■□□□ 1.87
TRAPPC4-208ENST00000527680 PATL2C9JE40 543 aaKnown RBP26.72■■□□□ 1.87
TRAPPC4-208ENST00000527680 F5H6K3 240 aa26.72■■□□□ 1.87
TRAPPC4-208ENST00000527680 M0R2C6 588 aa26.72■■□□□ 1.87
TRAPPC4-208ENST00000527680 PGK2P07205 417 aa26.72■■□□□ 1.87
TRAPPC4-208ENST00000527680 SLC4A3P48751 1232 aa26.72■■□□□ 1.87
TRAPPC4-208ENST00000527680 KLRC3Q07444 240 aa26.72■■□□□ 1.87
TRAPPC4-208ENST00000527680 ZBTB47Q9UFB7 747 aaPredicted RBP26.72■■□□□ 1.87
TRAPPC4-208ENST00000527680 CTDP1Q9Y5B0 961 aaPredicted RBP26.72■■□□□ 1.87
TRAPPC4-208ENST00000527680 PCDHB15Q9Y5E8 787 aa26.72■■□□□ 1.87
TRAPPC4-208ENST00000527680 A0A0G2JMZ2 1700 aa26.72■■□□□ 1.87
TRAPPC4-208ENST00000527680 COL11A1P12107 1806 aaPredicted RBP26.72■■□□□ 1.87
TRAPPC4-208ENST00000527680 TTC41PQ6P2S7 1318 aa26.71■■□□□ 1.87
TRAPPC4-208ENST00000527680 PRDM1O75626 825 aa26.71■■□□□ 1.87
TRAPPC4-208ENST00000527680 SLF1Q9BQI6 1058 aa26.71■■□□□ 1.87
TRAPPC4-208ENST00000527680 NACAP1Q9BZK3 213 aa26.71■■□□□ 1.87
TRAPPC4-208ENST00000527680 ZNF236Q9UL36 1845 aa26.71■■□□□ 1.87
TRAPPC4-208ENST00000527680 COPB2P35606 906 aa26.7■■□□□ 1.86
TRAPPC4-208ENST00000527680 IFNL3Q8IZI9 196 aa26.7■■□□□ 1.86
TRAPPC4-208ENST00000527680 FSD1Q9BTV5 496 aa26.7■■□□□ 1.86
TRAPPC4-208ENST00000527680 ATP11BQ9Y2G3 1177 aa26.7■■□□□ 1.86
TRAPPC4-208ENST00000527680 PARP14Q460N5 1801 aa26.69■■□□□ 1.86
TRAPPC4-208ENST00000527680 RTP1P59025 263 aa26.69■■□□□ 1.86
TRAPPC4-208ENST00000527680 EPB41L4AQ9HCS5 686 aaPredicted RBP26.69■■□□□ 1.86
TRAPPC4-208ENST00000527680 ZNF214Q9UL59 606 aaPredicted RBP26.69■■□□□ 1.86
TRAPPC4-208ENST00000527680 NDUFB10O96000 172 aa26.68■■□□□ 1.86
TRAPPC4-208ENST00000527680 LRIT3Q3SXY7 679 aa26.68■■□□□ 1.86
TRAPPC4-208ENST00000527680 CPXCR1Q8N123 301 aa26.68■■□□□ 1.86
TRAPPC4-208ENST00000527680 PRPF38AQ8NAV1 312 aaKnown RBP26.68■■□□□ 1.86
TRAPPC4-208ENST00000527680 DDX11Q96FC9 970 aa26.68■■□□□ 1.86
TRAPPC4-208ENST00000527680 SEC62Q99442 399 aaKnown RBP26.68■■□□□ 1.86
TRAPPC4-208ENST00000527680 TINF2Q9BSI4 451 aa26.68■■□□□ 1.86
TRAPPC4-208ENST00000527680 SMCHD1A6NHR9 2005 aa26.68■■□□□ 1.86
TRAPPC4-208ENST00000527680 ZBED4O75132 1171 aa26.67■■□□□ 1.86
TRAPPC4-208ENST00000527680 SLC3A2P08195 630 aaKnown RBP26.67■■□□□ 1.86
TRAPPC4-208ENST00000527680 PDE4BQ07343 736 aa26.67■■□□□ 1.86
TRAPPC4-208ENST00000527680 SNRNP48Q6IEG0 339 aaKnown RBP26.67■■□□□ 1.86
TRAPPC4-208ENST00000527680 SLC39A5Q6ZMH5 540 aa26.67■■□□□ 1.86
TRAPPC4-208ENST00000527680 OTUD7AQ8TE49 926 aaPredicted RBP26.67■■□□□ 1.86
TRAPPC4-208ENST00000527680 TEX13BQ9BXU2 312 aa26.67■■□□□ 1.86
TRAPPC4-208ENST00000527680 NAPBQ9H115 298 aa26.67■■□□□ 1.86
TRAPPC4-208ENST00000527680 DIS3Q9Y2L1 958 aaKnown RBP26.67■■□□□ 1.86
TRAPPC4-208ENST00000527680 TSPY3P0CV98 308 aa26.66■■□□□ 1.86
TRAPPC4-208ENST00000527680 TSPY8P0CW00 308 aa26.66■■□□□ 1.86
TRAPPC4-208ENST00000527680 RARBP10826 455 aa26.66■■□□□ 1.86
TRAPPC4-208ENST00000527680 ADCYAP1R1P41586 468 aa26.66■■□□□ 1.86
TRAPPC4-208ENST00000527680 LRRC41Q15345 812 aa26.66■■□□□ 1.86
TRAPPC4-208ENST00000527680 ZNF792Q3KQV3 632 aa26.66■■□□□ 1.86
TRAPPC4-208ENST00000527680 REPS2Q8NFH8 660 aa26.66■■□□□ 1.86
TRAPPC4-208ENST00000527680 FERMT2Q96AC1 680 aa26.66■■□□□ 1.86
TRAPPC4-208ENST00000527680 KIFC2Q96AC6 838 aa26.66■■□□□ 1.86
TRAPPC4-208ENST00000527680 CEP95Q96GE4 821 aa26.66■■□□□ 1.86
TRAPPC4-208ENST00000527680 NRBP1Q9UHY1 535 aa26.66■■□□□ 1.86
TRAPPC4-208ENST00000527680 ISY1Q9ULR0 285 aaKnown RBP26.66■■□□□ 1.86
TRAPPC4-208ENST00000527680 ROBO3Q96MS0 1386 aa26.66■■□□□ 1.86
TRAPPC4-208ENST00000527680 FAM47AQ5JRC9 791 aa26.65■■□□□ 1.86
TRAPPC4-208ENST00000527680 DEFB123Q8N688 67 aa26.65■■□□□ 1.86
TRAPPC4-208ENST00000527680 PI4K2BQ8TCG2 481 aa26.65■■□□□ 1.86
TRAPPC4-208ENST00000527680 XPNPEP3Q9NQH7 507 aa26.65■■□□□ 1.86
TRAPPC4-208ENST00000527680 MTMR4Q9NYA4 1195 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms