RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 NDUFB10O96000 172 aa12.45□□□□□ -0.42
PRPF40B-204ENST00000527253 KLRC3Q07444 240 aa12.45□□□□□ -0.42
PRPF40B-204ENST00000527253 FAM47AQ5JRC9 791 aa12.45□□□□□ -0.42
PRPF40B-204ENST00000527253 LHX8Q68G74 356 aa12.45□□□□□ -0.42
PRPF40B-204ENST00000527253 PLEKHM2Q8IWE5 1019 aa12.45□□□□□ -0.42
PRPF40B-204ENST00000527253 TRMT44Q8IYL2 757 aaKnown RBP12.45□□□□□ -0.42
PRPF40B-204ENST00000527253 ZNF444Q8N0Y2 327 aaPredicted RBP12.45□□□□□ -0.42
PRPF40B-204ENST00000527253 MB21D1Q8N884 522 aa12.45□□□□□ -0.42
PRPF40B-204ENST00000527253 SHCBP1Q8NEM2 672 aa12.45□□□□□ -0.42
PRPF40B-204ENST00000527253 TRPV1Q8NER1 839 aa12.45□□□□□ -0.42
PRPF40B-204ENST00000527253 REPS2Q8NFH8 660 aa12.45□□□□□ -0.42
PRPF40B-204ENST00000527253 MKL1Q969V6 931 aa12.45□□□□□ -0.42
PRPF40B-204ENST00000527253 NACAP1Q9BZK3 213 aa12.45□□□□□ -0.42
PRPF40B-204ENST00000527253 CWC22Q9HCG8 908 aaKnown RBP12.45□□□□□ -0.42
PRPF40B-204ENST00000527253 GOPCQ9HD26 462 aa12.45□□□□□ -0.42
PRPF40B-204ENST00000527253 MTMR4Q9NYA4 1195 aa12.45□□□□□ -0.42
PRPF40B-204ENST00000527253 CLIP2Q9UDT6 1046 aa12.45□□□□□ -0.42
PRPF40B-204ENST00000527253 OGDHLQ9ULD0 1010 aa12.45□□□□□ -0.42
PRPF40B-204ENST00000527253 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.45□□□□□ -0.42
PRPF40B-204ENST00000527253 TRIOBPQ9H2D6 2365 aa12.44□□□□□ -0.42
PRPF40B-204ENST00000527253 VWA5AO00534 786 aa12.44□□□□□ -0.42
PRPF40B-204ENST00000527253 RAD21O60216 631 aa12.44□□□□□ -0.42
PRPF40B-204ENST00000527253 CAPN2P17655 700 aa12.44□□□□□ -0.42
PRPF40B-204ENST00000527253 ADORA2AP29274 412 aa12.44□□□□□ -0.42
PRPF40B-204ENST00000527253 CYP2C19P33261 490 aa12.44□□□□□ -0.42
PRPF40B-204ENST00000527253 NUCB1Q02818 461 aa12.44□□□□□ -0.42
PRPF40B-204ENST00000527253 CTDSPL2Q05D32 466 aa12.44□□□□□ -0.42
PRPF40B-204ENST00000527253 PLS1Q14651 629 aa12.44□□□□□ -0.42
PRPF40B-204ENST00000527253 HABP4Q5JVS0 413 aaKnown RBP12.44□□□□□ -0.42
PRPF40B-204ENST00000527253 CHD1LQ86WJ1 897 aa12.44□□□□□ -0.42
PRPF40B-204ENST00000527253 NEDD1Q8NHV4 660 aa12.44□□□□□ -0.42
PRPF40B-204ENST00000527253 CEP95Q96GE4 821 aa12.44□□□□□ -0.42
PRPF40B-204ENST00000527253 NAPBQ9H115 298 aa12.44□□□□□ -0.42
PRPF40B-204ENST00000527253 HELLSQ9NRZ9 838 aa12.44□□□□□ -0.42
PRPF40B-204ENST00000527253 PPP1R9AQ9ULJ8 1098 aa12.44□□□□□ -0.42
PRPF40B-204ENST00000527253 COLQQ9Y215 455 aaPredicted RBP12.44□□□□□ -0.42
PRPF40B-204ENST00000527253 STRNO43815 780 aa12.43□□□□□ -0.42
PRPF40B-204ENST00000527253 TFAP4Q01664 338 aa12.43□□□□□ -0.42
PRPF40B-204ENST00000527253 NMIQ13287 307 aaPredicted RBP12.43□□□□□ -0.42
PRPF40B-204ENST00000527253 ZNF589Q86UQ0 364 aaPredicted RBP12.43□□□□□ -0.42
PRPF40B-204ENST00000527253 NCAPG2Q86XI2 1143 aa12.43□□□□□ -0.42
PRPF40B-204ENST00000527253 ANKLE1Q8NAG6 615 aa12.43□□□□□ -0.42
PRPF40B-204ENST00000527253 HTATIP2Q9BUP3 242 aa12.43□□□□□ -0.42
PRPF40B-204ENST00000527253 MROH8Q9H579 483 aa12.43□□□□□ -0.42
PRPF40B-204ENST00000527253 ZNF214Q9UL59 606 aaPredicted RBP12.43□□□□□ -0.42
PRPF40B-204ENST00000527253 IVNS1ABPQ9Y6Y0 642 aa12.43□□□□□ -0.42
PRPF40B-204ENST00000527253 COL11A1P12107 1806 aaPredicted RBP12.43□□□□□ -0.42
PRPF40B-204ENST00000527253 ALPK3Q96L96 1907 aa12.43□□□□□ -0.42
PRPF40B-204ENST00000527253 PLIN4Q96Q06 1357 aa12.43□□□□□ -0.42
PRPF40B-204ENST00000527253 STAT3P40763 770 aa12.42□□□□□ -0.42
PRPF40B-204ENST00000527253 ALX1Q15699 326 aa12.42□□□□□ -0.42
PRPF40B-204ENST00000527253 MCMDC2Q4G0Z9 681 aa12.42□□□□□ -0.42
PRPF40B-204ENST00000527253 MFSD14CQ5VZR4 134 aa12.42□□□□□ -0.42
PRPF40B-204ENST00000527253 NECAB2Q7Z6G3 386 aa12.42□□□□□ -0.42
PRPF40B-204ENST00000527253 DPP9Q86TI2 863 aa12.42□□□□□ -0.42
PRPF40B-204ENST00000527253 RIOX2Q8IUF8 465 aa12.42□□□□□ -0.42
PRPF40B-204ENST00000527253 LRRC47Q8N1G4 583 aaKnown RBP12.42□□□□□ -0.42
PRPF40B-204ENST00000527253 SLF1Q9BQI6 1058 aa12.42□□□□□ -0.42
PRPF40B-204ENST00000527253 OSBPL3Q9H4L5 887 aa12.42□□□□□ -0.42
PRPF40B-204ENST00000527253 ZNF287Q9HBT7 754 aa12.42□□□□□ -0.42
PRPF40B-204ENST00000527253 IL17RBQ9NRM6 502 aa12.42□□□□□ -0.42
PRPF40B-204ENST00000527253 ANAPC4Q9UJX5 808 aa12.42□□□□□ -0.42
PRPF40B-204ENST00000527253 ZNF236Q9UL36 1845 aa12.41□□□□□ -0.42
PRPF40B-204ENST00000527253 PFASO15067 1338 aa12.41□□□□□ -0.42
PRPF40B-204ENST00000527253 TRIM6-TRIM34B2RNG4 842 aa12.41□□□□□ -0.42
PRPF40B-204ENST00000527253 NMT2O60551 498 aa12.41□□□□□ -0.42
PRPF40B-204ENST00000527253 TTLL1O95922 423 aa12.41□□□□□ -0.42
PRPF40B-204ENST00000527253 FGAP02671 866 aa12.41□□□□□ -0.42
PRPF40B-204ENST00000527253 TSPY3P0CV98 308 aa12.41□□□□□ -0.42
PRPF40B-204ENST00000527253 TSPY8P0CW00 308 aa12.41□□□□□ -0.42
PRPF40B-204ENST00000527253 CYBAP13498 195 aa12.41□□□□□ -0.42
PRPF40B-204ENST00000527253 PDE4BQ07343 736 aa12.41□□□□□ -0.42
PRPF40B-204ENST00000527253 PRAMEF19Q5SWL8 479 aa12.41□□□□□ -0.42
PRPF40B-204ENST00000527253 OLFML2BQ68BL8 750 aa12.41□□□□□ -0.42
PRPF40B-204ENST00000527253 ABRAQ8N0Z2 381 aa12.41□□□□□ -0.42
PRPF40B-204ENST00000527253 RILPL2Q969X0 211 aa12.41□□□□□ -0.42
PRPF40B-204ENST00000527253 NBPF3Q9H094 633 aa12.41□□□□□ -0.42
PRPF40B-204ENST00000527253 RIPK3Q9Y572 518 aa12.41□□□□□ -0.42
PRPF40B-204ENST00000527253 ZNFX1Q9P2E3 1918 aaKnown RBP12.41□□□□□ -0.42
PRPF40B-204ENST00000527253 MYH4Q9Y623 1939 aa12.41□□□□□ -0.42
PRPF40B-204ENST00000527253 SLC25A27O95847 323 aa12.4□□□□□ -0.42
PRPF40B-204ENST00000527253 PGK2P07205 417 aa12.4□□□□□ -0.42
PRPF40B-204ENST00000527253 SLC3A2P08195 630 aaKnown RBP12.4□□□□□ -0.42
PRPF40B-204ENST00000527253 FGRP09769 529 aa12.4□□□□□ -0.42
PRPF40B-204ENST00000527253 HSPD1P10809 573 aaKnown RBP12.4□□□□□ -0.42
PRPF40B-204ENST00000527253 COL6A1P12109 1028 aa12.4□□□□□ -0.42
PRPF40B-204ENST00000527253 SDSP20132 328 aa12.4□□□□□ -0.42
PRPF40B-204ENST00000527253 PDE4AP27815 886 aa12.4□□□□□ -0.42
PRPF40B-204ENST00000527253 IRX6P78412 446 aaPredicted RBP12.4□□□□□ -0.42
PRPF40B-204ENST00000527253 SLFN13Q68D06 897 aa12.4□□□□□ -0.42
PRPF40B-204ENST00000527253 CHRDL2Q6WN34 429 aa12.4□□□□□ -0.42
PRPF40B-204ENST00000527253 RASGRP2Q7LDG7 609 aa12.4□□□□□ -0.42
PRPF40B-204ENST00000527253 TICAM2Q86XR7 235 aa12.4□□□□□ -0.42
PRPF40B-204ENST00000527253 GMCL1P1Q8NEA9 526 aa12.4□□□□□ -0.42
PRPF40B-204ENST00000527253 CHMP4CQ96CF2 233 aa12.4□□□□□ -0.42
PRPF40B-204ENST00000527253 PRO3102Q9H379 93 aa12.4□□□□□ -0.42
PRPF40B-204ENST00000527253 C11orf49Q9H6J7 331 aa12.4□□□□□ -0.42
PRPF40B-204ENST00000527253 PCDH10Q9P2E7 1040 aa12.4□□□□□ -0.42
PRPF40B-204ENST00000527253 ORC4O43929 436 aa12.39□□□□□ -0.43
PRPF40B-204ENST00000527253 EVI5O60447 810 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms