RNA–Protein interactions for RNA: ENST00000527243.5

CTSB-214, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-214ENST00000527243 MAPK4P31152 587 aa13.25□□□□□ -0.29
CTSB-214ENST00000527243 IMMTQ16891 758 aaKnown RBP13.25□□□□□ -0.29
CTSB-214ENST00000527243 USP6NLQ92738 828 aa13.25□□□□□ -0.29
CTSB-214ENST00000527243 GMCL1Q96IK5 515 aa13.25□□□□□ -0.29
CTSB-214ENST00000527243 ZNF333Q96JL9 665 aa13.25□□□□□ -0.29
CTSB-214ENST00000527243 NUP88Q99567 741 aaPredicted RBP13.25□□□□□ -0.29
CTSB-214ENST00000527243 LSG1Q9H089 658 aaKnown RBP13.25□□□□□ -0.29
CTSB-214ENST00000527243 CCDC85CA6NKD9 419 aa13.24□□□□□ -0.29
CTSB-214ENST00000527243 CYP21A2P08686 494 aa13.24□□□□□ -0.29
CTSB-214ENST00000527243 RRP12Q5JTH9 1297 aaKnown RBP13.24□□□□□ -0.29
CTSB-214ENST00000527243 MORN1Q5T089 497 aa13.24□□□□□ -0.29
CTSB-214ENST00000527243 SLFN13Q68D06 897 aa13.24□□□□□ -0.29
CTSB-214ENST00000527243 ESR2Q92731 530 aa13.24□□□□□ -0.29
CTSB-214ENST00000527243 COA7Q96BR5 231 aa13.24□□□□□ -0.29
CTSB-214ENST00000527243 MOV10L1Q9BXT6 1211 aaKnown RBP13.24□□□□□ -0.29
CTSB-214ENST00000527243 TAF6LQ9Y6J9 622 aa13.24□□□□□ -0.29
CTSB-214ENST00000527243 U3KPZ7 1027 aaPredicted RBP13.24□□□□□ -0.29
CTSB-214ENST00000527243 MGAMO43451 1857 aa13.24□□□□□ -0.29
CTSB-214ENST00000527243 PARP14Q460N5 1801 aa13.24□□□□□ -0.29
CTSB-214ENST00000527243 KIAA0100Q14667 2235 aaKnown RBP13.24□□□□□ -0.29
CTSB-214ENST00000527243 CENPFP49454 3210 aa13.23□□□□□ -0.29
CTSB-214ENST00000527243 VWA5AO00534 786 aa13.23□□□□□ -0.29
CTSB-214ENST00000527243 CAPN15O75808 1086 aa13.23□□□□□ -0.29
CTSB-214ENST00000527243 GRK4P32298 578 aa13.23□□□□□ -0.29
CTSB-214ENST00000527243 RGS19P49795 217 aa13.23□□□□□ -0.29
CTSB-214ENST00000527243 TMEM132BQ14DG7 1078 aa13.23□□□□□ -0.29
CTSB-214ENST00000527243 GPR142Q7Z601 462 aa13.23□□□□□ -0.29
CTSB-214ENST00000527243 SHCBP1Q8NEM2 672 aa13.23□□□□□ -0.29
CTSB-214ENST00000527243 PXYLP1Q8TE99 480 aa13.23□□□□□ -0.29
CTSB-214ENST00000527243 ANKS1AQ92625 1134 aa13.23□□□□□ -0.29
CTSB-214ENST00000527243 TTC14Q96N46 770 aa13.23□□□□□ -0.29
CTSB-214ENST00000527243 TMEM47Q9BQJ4 181 aa13.23□□□□□ -0.29
CTSB-214ENST00000527243 SPATC1LQ9H0A9 340 aa13.23□□□□□ -0.29
CTSB-214ENST00000527243 TOMM22Q9NS69 142 aa13.23□□□□□ -0.29
CTSB-214ENST00000527243 ZNF214Q9UL59 606 aaPredicted RBP13.23□□□□□ -0.29
CTSB-214ENST00000527243 STX8Q9UNK0 236 aa13.23□□□□□ -0.29
CTSB-214ENST00000527243 MYH4Q9Y623 1939 aa13.22□□□□□ -0.29
CTSB-214ENST00000527243 B4E1Z4 1266 aa13.22□□□□□ -0.29
CTSB-214ENST00000527243 PLA2G6O60733 806 aa13.22□□□□□ -0.29
CTSB-214ENST00000527243 KDM4AO75164 1064 aa13.22□□□□□ -0.29
CTSB-214ENST00000527243 TOP1P11387 765 aaKnown RBP13.22□□□□□ -0.29
CTSB-214ENST00000527243 BMP3P12645 472 aa13.22□□□□□ -0.29
CTSB-214ENST00000527243 CCNA1P78396 465 aa13.22□□□□□ -0.29
CTSB-214ENST00000527243 SLC9C1Q4G0N8 1177 aa13.22□□□□□ -0.29
CTSB-214ENST00000527243 STOX1Q6ZVD7 989 aa13.22□□□□□ -0.29
CTSB-214ENST00000527243 RASGRP2Q7LDG7 609 aa13.22□□□□□ -0.29
CTSB-214ENST00000527243 PLEKHH3Q7Z736 793 aa13.22□□□□□ -0.29
CTSB-214ENST00000527243 DGKHQ86XP1 1220 aa13.22□□□□□ -0.29
CTSB-214ENST00000527243 SLAIN1Q8ND83 568 aa13.22□□□□□ -0.29
CTSB-214ENST00000527243 RAET1EQ8TD07 263 aa13.22□□□□□ -0.29
CTSB-214ENST00000527243 SH3TC2Q8TF17 1288 aa13.22□□□□□ -0.29
CTSB-214ENST00000527243 SLF1Q9BQI6 1058 aa13.22□□□□□ -0.29
CTSB-214ENST00000527243 ZSWIM5Q9P217 1185 aa13.22□□□□□ -0.29
CTSB-214ENST00000527243 FEM1BQ9UK73 627 aa13.22□□□□□ -0.29
CTSB-214ENST00000527243 RBM8AQ9Y5S9 174 aaKnown RBP13.22□□□□□ -0.29
CTSB-214ENST00000527243 PLXNB2O15031 1838 aa13.22□□□□□ -0.29
CTSB-214ENST00000527243 ATP2A1O14983 1001 aa13.21□□□□□ -0.29
CTSB-214ENST00000527243 RAD21O60216 631 aa13.21□□□□□ -0.29
CTSB-214ENST00000527243 ADCY3O60266 1144 aa13.21□□□□□ -0.29
CTSB-214ENST00000527243 CDC45O75419 566 aa13.21□□□□□ -0.29
CTSB-214ENST00000527243 IGHA2P01877 340 aa13.21□□□□□ -0.29
CTSB-214ENST00000527243 SNHG28P0DPA3 235 aa13.21□□□□□ -0.29
CTSB-214ENST00000527243 XRCC5P13010 732 aaKnown RBP13.21□□□□□ -0.29
CTSB-214ENST00000527243 PTPREP23469 700 aa13.21□□□□□ -0.29
CTSB-214ENST00000527243 MCCP23508 829 aa13.21□□□□□ -0.29
CTSB-214ENST00000527243 GRB14Q14449 540 aa13.21□□□□□ -0.29
CTSB-214ENST00000527243 RIOX2Q8IUF8 465 aa13.21□□□□□ -0.29
CTSB-214ENST00000527243 PRPF38AQ8NAV1 312 aaKnown RBP13.21□□□□□ -0.29
CTSB-214ENST00000527243 SOCS4Q8WXH5 440 aa13.21□□□□□ -0.29
CTSB-214ENST00000527243 KRT23Q9C075 422 aa13.21□□□□□ -0.29
CTSB-214ENST00000527243 CNNM2Q9H8M5 875 aa13.21□□□□□ -0.29
CTSB-214ENST00000527243 SLC15A5A6NIM6 579 aa13.2□□□□□ -0.3
CTSB-214ENST00000527243 TMEM232C9JQI7 657 aa13.2□□□□□ -0.3
CTSB-214ENST00000527243 HOXC6P09630 235 aa13.2□□□□□ -0.3
CTSB-214ENST00000527243 ELNP15502 786 aa13.2□□□□□ -0.3
CTSB-214ENST00000527243 ERCC3P19447 782 aa13.2□□□□□ -0.3
CTSB-214ENST00000527243 SLC1A4P43007 532 aa13.2□□□□□ -0.3
CTSB-214ENST00000527243 NECTIN1Q15223 517 aa13.2□□□□□ -0.3
CTSB-214ENST00000527243 SEC23AQ15436 765 aa13.2□□□□□ -0.3
CTSB-214ENST00000527243 CCDC178Q5BJE1 867 aa13.2□□□□□ -0.3
CTSB-214ENST00000527243 BTNL9Q6UXG8 535 aa13.2□□□□□ -0.3
CTSB-214ENST00000527243 CYB5R4Q7L1T6 521 aa13.2□□□□□ -0.3
CTSB-214ENST00000527243 NBPF11Q86T75 865 aa13.2□□□□□ -0.3
CTSB-214ENST00000527243 ENAHQ8N8S7 591 aaPredicted RBP13.2□□□□□ -0.3
CTSB-214ENST00000527243 DCAF4Q8WV16 495 aa13.2□□□□□ -0.3
CTSB-214ENST00000527243 NUDT12Q9BQG2 462 aa13.2□□□□□ -0.3
CTSB-214ENST00000527243 SLC38A10Q9HBR0 1119 aa13.2□□□□□ -0.3
CTSB-214ENST00000527243 E7EWF7 191 aa13.19□□□□□ -0.3
CTSB-214ENST00000527243 SLC25A27O95847 323 aa13.19□□□□□ -0.3
CTSB-214ENST00000527243 PDHBP11177 359 aa13.19□□□□□ -0.3
CTSB-214ENST00000527243 ANP32AP39687 249 aaKnown RBP13.19□□□□□ -0.3
CTSB-214ENST00000527243 STAT3P40763 770 aa13.19□□□□□ -0.3
CTSB-214ENST00000527243 SOX10P56693 466 aa13.19□□□□□ -0.3
CTSB-214ENST00000527243 MAP2K5Q13163 448 aa13.19□□□□□ -0.3
CTSB-214ENST00000527243 MTFR1Q15390 333 aa13.19□□□□□ -0.3
CTSB-214ENST00000527243 KCTD1Q719H9 257 aa13.19□□□□□ -0.3
CTSB-214ENST00000527243 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.19□□□□□ -0.3
CTSB-214ENST00000527243 FAM160B2Q86V87 743 aa13.19□□□□□ -0.3
CTSB-214ENST00000527243 IQCA1Q86XH1 822 aa13.19□□□□□ -0.3
CTSB-214ENST00000527243 ABRAQ8N0Z2 381 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms