RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 AMOTL1Q8IY63 956 aa19.41■□□□□ 0.7
PTPRU-210ENST00000527027 FERMT2Q96AC1 680 aa19.41■□□□□ 0.7
PTPRU-210ENST00000527027 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.41■□□□□ 0.7
PTPRU-210ENST00000527027 BCL11AQ9H165 835 aa19.41■□□□□ 0.7
PTPRU-210ENST00000527027 BOLA2Q9H3K6 86 aa19.41■□□□□ 0.7
PTPRU-210ENST00000527027 NAV1Q8NEY1 1877 aa19.4■□□□□ 0.7
PTPRU-210ENST00000527027 CYP2D7A0A087X1C5 515 aa19.4■□□□□ 0.7
PTPRU-210ENST00000527027 EEF2P13639 858 aaKnown RBP19.4■□□□□ 0.7
PTPRU-210ENST00000527027 ATP5JP18859 108 aa19.4■□□□□ 0.7
PTPRU-210ENST00000527027 C9orf50Q5SZB4 431 aa19.4■□□□□ 0.7
PTPRU-210ENST00000527027 C16orf86Q6ZW13 317 aa19.4■□□□□ 0.7
PTPRU-210ENST00000527027 SIRT2Q8IXJ6 389 aa19.4■□□□□ 0.7
PTPRU-210ENST00000527027 COL25A1Q9BXS0 654 aaPredicted RBP19.4■□□□□ 0.7
PTPRU-210ENST00000527027 KANSL2Q9H9L4 492 aa19.4■□□□□ 0.7
PTPRU-210ENST00000527027 PDLIM7Q9NR12 457 aa19.4■□□□□ 0.7
PTPRU-210ENST00000527027 RLFQ13129 1914 aa19.4■□□□□ 0.7
PTPRU-210ENST00000527027 TRIM43BA6NCK2 446 aa19.39■□□□□ 0.69
PTPRU-210ENST00000527027 SMIM22K7EJ46 135 aa19.39■□□□□ 0.69
PTPRU-210ENST00000527027 RARBP10826 455 aa19.39■□□□□ 0.69
PTPRU-210ENST00000527027 TLE2Q04725 743 aa19.39■□□□□ 0.69
PTPRU-210ENST00000527027 SH3RF1Q7Z6J0 888 aa19.39■□□□□ 0.69
PTPRU-210ENST00000527027 RIOX2Q8IUF8 465 aa19.39■□□□□ 0.69
PTPRU-210ENST00000527027 TRIM43Q96BQ3 446 aaPredicted RBP19.39■□□□□ 0.69
PTPRU-210ENST00000527027 DDRGK1Q96HY6 314 aa19.39■□□□□ 0.69
PTPRU-210ENST00000527027 MMP19Q99542 508 aa19.39■□□□□ 0.69
PTPRU-210ENST00000527027 TINF2Q9BSI4 451 aa19.39■□□□□ 0.69
PTPRU-210ENST00000527027 SEMA6BQ9H3T3 888 aa19.39■□□□□ 0.69
PTPRU-210ENST00000527027 XPNPEP3Q9NQH7 507 aa19.39■□□□□ 0.69
PTPRU-210ENST00000527027 FBXO28Q9NVF7 368 aa19.39■□□□□ 0.69
PTPRU-210ENST00000527027 PHF24Q9UPV7 400 aa19.39■□□□□ 0.69
PTPRU-210ENST00000527027 DIS3Q9Y2L1 958 aaKnown RBP19.39■□□□□ 0.69
PTPRU-210ENST00000527027 A0A0G2JMZ2 1700 aa19.38■□□□□ 0.69
PTPRU-210ENST00000527027 PGK2P07205 417 aa19.38■□□□□ 0.69
PTPRU-210ENST00000527027 STAT3P40763 770 aa19.38■□□□□ 0.69
PTPRU-210ENST00000527027 KCTD2Q14681 263 aa19.38■□□□□ 0.69
PTPRU-210ENST00000527027 UBE3CQ15386 1083 aa19.38■□□□□ 0.69
PTPRU-210ENST00000527027 ZNF792Q3KQV3 632 aa19.38■□□□□ 0.69
PTPRU-210ENST00000527027 RNF180Q86T96 592 aa19.38■□□□□ 0.69
PTPRU-210ENST00000527027 CDX2Q99626 313 aaPredicted RBP19.38■□□□□ 0.69
PTPRU-210ENST00000527027 HAUS7Q99871 368 aa19.38■□□□□ 0.69
PTPRU-210ENST00000527027 TACC3Q9Y6A5 838 aa19.38■□□□□ 0.69
PTPRU-210ENST00000527027 VWA5AO00534 786 aa19.37■□□□□ 0.69
PTPRU-210ENST00000527027 SMAD3P84022 425 aaKnown RBP19.37■□□□□ 0.69
PTPRU-210ENST00000527027 GOPCQ9HD26 462 aa19.37■□□□□ 0.69
PTPRU-210ENST00000527027 ZBTB40Q9NUA8 1239 aa19.37■□□□□ 0.69
PTPRU-210ENST00000527027 PPP1R9AQ9ULJ8 1098 aa19.37■□□□□ 0.69
PTPRU-210ENST00000527027 SLC4A4Q9Y6R1 1079 aa19.37■□□□□ 0.69
PTPRU-210ENST00000527027 COPB2P35606 906 aa19.36■□□□□ 0.69
PTPRU-210ENST00000527027 CTR9Q6PD62 1173 aa19.36■□□□□ 0.69
PTPRU-210ENST00000527027 ZNF214Q9UL59 606 aaPredicted RBP19.36■□□□□ 0.69
PTPRU-210ENST00000527027 DDX19BQ9UMR2 479 aa19.36■□□□□ 0.69
PTPRU-210ENST00000527027 PGK1P00558 417 aa19.35■□□□□ 0.69
PTPRU-210ENST00000527027 CHGBP05060 677 aa19.35■□□□□ 0.69
PTPRU-210ENST00000527027 CLTBP09497 229 aa19.35■□□□□ 0.69
PTPRU-210ENST00000527027 ZNF865P0CJ78 1059 aaPredicted RBP19.35■□□□□ 0.69
PTPRU-210ENST00000527027 TAL1P17542 331 aaPredicted RBP19.35■□□□□ 0.69
PTPRU-210ENST00000527027 ZSCAN25Q6NSZ9 544 aa19.35■□□□□ 0.69
PTPRU-210ENST00000527027 REPS2Q8NFH8 660 aa19.35■□□□□ 0.69
PTPRU-210ENST00000527027 EYSQ5T1H1 3165 aa19.34■□□□□ 0.69
PTPRU-210ENST00000527027 ZBED9Q6R2W3 1325 aa19.34■□□□□ 0.69
PTPRU-210ENST00000527027 RAD21O60216 631 aa19.34■□□□□ 0.69
PTPRU-210ENST00000527027 AKR1A1P14550 325 aa19.34■□□□□ 0.69
PTPRU-210ENST00000527027 ITGB8P26012 769 aa19.34■□□□□ 0.69
PTPRU-210ENST00000527027 FAM83BQ5T0W9 1011 aa19.34■□□□□ 0.69
PTPRU-210ENST00000527027 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.34■□□□□ 0.69
PTPRU-210ENST00000527027 PUS7LQ9H0K6 701 aaKnown RBP19.34■□□□□ 0.69
PTPRU-210ENST00000527027 CNPY2Q9Y2B0 182 aa19.34■□□□□ 0.69
PTPRU-210ENST00000527027 COG6Q9Y2V7 657 aa19.34■□□□□ 0.69
PTPRU-210ENST00000527027 PRUNE2Q8WUY3 3088 aa19.34■□□□□ 0.69
PTPRU-210ENST00000527027 LTBP2Q14767 1821 aa19.34■□□□□ 0.69
PTPRU-210ENST00000527027 A0A1W2PQ45 241 aaPredicted RBP19.33■□□□□ 0.68
PTPRU-210ENST00000527027 A0A1W2PQY0 241 aa19.33■□□□□ 0.68
PTPRU-210ENST00000527027 KIAA0355O15063 1070 aa19.33■□□□□ 0.68
PTPRU-210ENST00000527027 TSEN34Q9BSV6 310 aaKnown RBP19.33■□□□□ 0.68
PTPRU-210ENST00000527027 TTYH1Q9H313 450 aaPredicted RBP19.33■□□□□ 0.68
PTPRU-210ENST00000527027 PQBP1O60828 265 aaKnown RBP19.32■□□□□ 0.68
PTPRU-210ENST00000527027 RAG1P15918 1043 aa19.32■□□□□ 0.68
PTPRU-210ENST00000527027 MSL3Q8N5Y2 521 aaKnown RBP19.32■□□□□ 0.68
PTPRU-210ENST00000527027 MAFAQ8NHW3 353 aaPredicted RBP19.32■□□□□ 0.68
PTPRU-210ENST00000527027 CHMP4BQ9H444 224 aaKnown RBP19.32■□□□□ 0.68
PTPRU-210ENST00000527027 TMEM39AQ9NV64 488 aa19.32■□□□□ 0.68
PTPRU-210ENST00000527027 ARPP21Q9UBL0 812 aaPredicted RBP19.32■□□□□ 0.68
PTPRU-210ENST00000527027 SMCHD1A6NHR9 2005 aa19.32■□□□□ 0.68
PTPRU-210ENST00000527027 ROBO3Q96MS0 1386 aa19.32■□□□□ 0.68
PTPRU-210ENST00000527027 VCANP13611 3396 aa19.31■□□□□ 0.68
PTPRU-210ENST00000527027 ADAMTS4O75173 837 aa19.31■□□□□ 0.68
PTPRU-210ENST00000527027 EPHB4P54760 987 aa19.31■□□□□ 0.68
PTPRU-210ENST00000527027 SBK1Q52WX2 424 aa19.31■□□□□ 0.68
PTPRU-210ENST00000527027 MIER1Q8N108 512 aa19.31■□□□□ 0.68
PTPRU-210ENST00000527027 MYLIPQ8WY64 445 aa19.31■□□□□ 0.68
PTPRU-210ENST00000527027 RNPC3Q96LT9 517 aaKnown RBP19.31■□□□□ 0.68
PTPRU-210ENST00000527027 TOX2Q96NM4 488 aa19.31■□□□□ 0.68
PTPRU-210ENST00000527027 STRBPQ96SI9 672 aaKnown RBP19.31■□□□□ 0.68
PTPRU-210ENST00000527027 SLF1Q9BQI6 1058 aa19.31■□□□□ 0.68
PTPRU-210ENST00000527027 TEX13BQ9BXU2 312 aa19.31■□□□□ 0.68
PTPRU-210ENST00000527027 FAM184BQ9ULE4 1060 aa19.31■□□□□ 0.68
PTPRU-210ENST00000527027 ZNFX1Q9P2E3 1918 aaKnown RBP19.3■□□□□ 0.68
PTPRU-210ENST00000527027 F5H6K3 240 aa19.3■□□□□ 0.68
PTPRU-210ENST00000527027 ACLYP53396 1101 aa19.3■□□□□ 0.68
PTPRU-210ENST00000527027 KLRC3Q07444 240 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms