RNA–Protein interactions for RNA: ENST00000526313.5

USH1C-204, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best)

Gene USH1C, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-204ENST00000526313 GPKOWQ92917 476 aaPredicted RBP eCLIP18.2■□□□□ 0.5
USH1C-204ENST00000526313 FBXW7Q969H0 707 aa18.2■□□□□ 0.5
USH1C-204ENST00000526313 TEKT1Q969V4 418 aa18.2■□□□□ 0.5
USH1C-204ENST00000526313 ANO8Q9HCE9 1232 aaPredicted RBP18.2■□□□□ 0.5
USH1C-204ENST00000526313 SWAP70Q9UH65 585 aa18.2■□□□□ 0.5
USH1C-204ENST00000526313 FOXN1O15353 648 aa18.19■□□□□ 0.5
USH1C-204ENST00000526313 PARP1P09874 1014 aaKnown RBP18.19■□□□□ 0.5
USH1C-204ENST00000526313 PTGS1P23219 599 aa18.19■□□□□ 0.5
USH1C-204ENST00000526313 HDLBPQ00341 1268 aaKnown RBP18.19■□□□□ 0.5
USH1C-204ENST00000526313 STRIP1Q5VSL9 837 aa18.19■□□□□ 0.5
USH1C-204ENST00000526313 C4orf32Q8N8J7 132 aa18.19■□□□□ 0.5
USH1C-204ENST00000526313 CCDC148Q8NFR7 591 aa18.19■□□□□ 0.5
USH1C-204ENST00000526313 ZDHHC15Q96MV8 337 aa18.19■□□□□ 0.5
USH1C-204ENST00000526313 MTMR4Q9NYA4 1195 aa18.19■□□□□ 0.5
USH1C-204ENST00000526313 CLIP2Q9UDT6 1046 aa18.19■□□□□ 0.5
USH1C-204ENST00000526313 NRBP1Q9UHY1 535 aa18.19■□□□□ 0.5
USH1C-204ENST00000526313 BMP6P22004 513 aa18.19■□□□□ 0.5
USH1C-204ENST00000526313 SH3RF1Q7Z6J0 888 aa18.19■□□□□ 0.5
USH1C-204ENST00000526313 OSBPL5Q9H0X9 879 aaPredicted RBP18.19■□□□□ 0.5
USH1C-204ENST00000526313 HSD3B7Q9H2F3 369 aa18.19■□□□□ 0.5
USH1C-204ENST00000526313 RGS17Q9UGC6 210 aaPredicted RBP18.19■□□□□ 0.5
USH1C-204ENST00000526313 SCNN1DP51172 638 aa18.18■□□□□ 0.5
USH1C-204ENST00000526313 PICALMQ13492 652 aa18.18■□□□□ 0.5
USH1C-204ENST00000526313 NOLC1Q14978 699 aaKnown RBP eCLIP18.18■□□□□ 0.5
USH1C-204ENST00000526313 DACT2Q5SW24 774 aa18.18■□□□□ 0.5
USH1C-204ENST00000526313 ARL6IP4Q66PJ3 421 aaKnown RBP18.18■□□□□ 0.5
USH1C-204ENST00000526313 CNKSR1Q969H4 720 aa18.18■□□□□ 0.5
USH1C-204ENST00000526313 EPSTI1Q96J88 318 aa18.18■□□□□ 0.5
USH1C-204ENST00000526313 KCNQ5Q9NR82 932 aa18.18■□□□□ 0.5
USH1C-204ENST00000526313 SERPINB13Q9UIV8 391 aa18.18■□□□□ 0.5
USH1C-204ENST00000526313 ADAMTSL1Q8N6G6 1762 aa18.17■□□□□ 0.5
USH1C-204ENST00000526313 A0A087X0B3 334 aa18.17■□□□□ 0.5
USH1C-204ENST00000526313 G3V3G9 751 aa18.17■□□□□ 0.5
USH1C-204ENST00000526313 SNHG28P0DPA3 235 aa18.17■□□□□ 0.5
USH1C-204ENST00000526313 CRKP46108 304 aa18.17■□□□□ 0.5
USH1C-204ENST00000526313 DCAF8Q5TAQ9 597 aa18.17■□□□□ 0.5
USH1C-204ENST00000526313 DRC7Q8IY82 874 aa18.17■□□□□ 0.5
USH1C-204ENST00000526313 TRIML1Q8N9V2 468 aa18.17■□□□□ 0.5
USH1C-204ENST00000526313 ZMYND12Q9H0C1 365 aa18.17■□□□□ 0.5
USH1C-204ENST00000526313 DBNDD1Q9H9R9 158 aa18.17■□□□□ 0.5
USH1C-204ENST00000526313 PCDHA6Q9UN73 950 aa18.17■□□□□ 0.5
USH1C-204ENST00000526313 PCDHA8Q9Y5H6 950 aa18.17■□□□□ 0.5
USH1C-204ENST00000526313 GOLGA8HP0CJ92 632 aa18.17■□□□□ 0.5
USH1C-204ENST00000526313 CCDC144BQ3MJ40 725 aa18.17■□□□□ 0.5
USH1C-204ENST00000526313 USP17L2Q6R6M4 530 aa18.17■□□□□ 0.5
USH1C-204ENST00000526313 SYMPKQ92797 1274 aaKnown RBP18.17■□□□□ 0.5
USH1C-204ENST00000526313 EHD4Q9H223 541 aa18.17■□□□□ 0.5
USH1C-204ENST00000526313 RIOX1Q9H6W3 641 aa18.17■□□□□ 0.5
USH1C-204ENST00000526313 MAN1B1Q9UKM7 699 aa18.17■□□□□ 0.5
USH1C-204ENST00000526313 PYCARDQ9ULZ3 195 aa18.17■□□□□ 0.5
USH1C-204ENST00000526313 SCN9AQ15858 1988 aa18.17■□□□□ 0.5
USH1C-204ENST00000526313 GREB1LQ9C091 1923 aaPredicted RBP18.17■□□□□ 0.5
USH1C-204ENST00000526313 SLFN14P0C7P3 912 aa18.16■□□□□ 0.5
USH1C-204ENST00000526313 AKR1B1P15121 316 aa18.16■□□□□ 0.5
USH1C-204ENST00000526313 SHMT1P34896 483 aa18.16■□□□□ 0.5
USH1C-204ENST00000526313 TERF1P54274 439 aa18.16■□□□□ 0.5
USH1C-204ENST00000526313 MORC3Q14149 939 aa18.16■□□□□ 0.5
USH1C-204ENST00000526313 IL17AQ16552 155 aa18.16■□□□□ 0.5
USH1C-204ENST00000526313 ISM2Q6H9L7 571 aa18.16■□□□□ 0.5
USH1C-204ENST00000526313 MYO1BO43795 1136 aa18.16■□□□□ 0.5
USH1C-204ENST00000526313 NPM3O75607 178 aaKnown RBP18.16■□□□□ 0.5
USH1C-204ENST00000526313 PRR29P0C7W0 189 aa18.16■□□□□ 0.5
USH1C-204ENST00000526313 PDHBP11177 359 aa18.16■□□□□ 0.5
USH1C-204ENST00000526313 EZH2Q15910 746 aaKnown RBP18.16■□□□□ 0.5
USH1C-204ENST00000526313 RASGRP2Q7LDG7 609 aa18.16■□□□□ 0.5
USH1C-204ENST00000526313 CHRNA5P30532 468 aa18.15■□□□□ 0.5
USH1C-204ENST00000526313 TPM4P67936 248 aa18.15■□□□□ 0.5
USH1C-204ENST00000526313 CC2D2BQ6DHV5 1058 aa18.15■□□□□ 0.5
USH1C-204ENST00000526313 HEATR3Q7Z4Q2 680 aa18.15■□□□□ 0.5
USH1C-204ENST00000526313 MYH8P13535 1937 aa18.15■□□□□ 0.5
USH1C-204ENST00000526313 USP17L5A8MUK1 530 aa18.14■□□□□ 0.5
USH1C-204ENST00000526313 ECE2O60344 883 aa18.14■□□□□ 0.5
USH1C-204ENST00000526313 MYL5Q02045 173 aa18.14■□□□□ 0.5
USH1C-204ENST00000526313 E2F4Q16254 413 aa18.14■□□□□ 0.5
USH1C-204ENST00000526313 PDILTQ8N807 584 aa18.14■□□□□ 0.5
USH1C-204ENST00000526313 MLKLQ8NB16 471 aa18.14■□□□□ 0.5
USH1C-204ENST00000526313 CCDC12Q8WUD4 166 aaPredicted RBP18.14■□□□□ 0.5
USH1C-204ENST00000526313 SMARCE1Q969G3 411 aa18.14■□□□□ 0.5
USH1C-204ENST00000526313 RRP36Q96EU6 259 aaKnown RBP18.14■□□□□ 0.5
USH1C-204ENST00000526313 IDI2Q9BXS1 227 aa18.14■□□□□ 0.5
USH1C-204ENST00000526313 VWA3AA6NCI4 1184 aa18.14■□□□□ 0.49
USH1C-204ENST00000526313 MCM7P33993 719 aa18.14■□□□□ 0.49
USH1C-204ENST00000526313 NFIAQ12857 509 aa18.14■□□□□ 0.49
USH1C-204ENST00000526313 ASPRV1Q53RT3 343 aa18.14■□□□□ 0.49
USH1C-204ENST00000526313 CACTINQ8WUQ7 758 aaKnown RBP18.14■□□□□ 0.49
USH1C-204ENST00000526313 CCDC34Q96HJ3 373 aa18.14■□□□□ 0.49
USH1C-204ENST00000526313 CPVLQ9H3G5 476 aa18.14■□□□□ 0.49
USH1C-204ENST00000526313 STK32BQ9NY57 414 aa18.14■□□□□ 0.49
USH1C-204ENST00000526313 CCDC194A0A1B0GVG4 234 aa18.13■□□□□ 0.49
USH1C-204ENST00000526313 NEMFO60524 1076 aa18.13■□□□□ 0.49
USH1C-204ENST00000526313 TTLL1O95922 423 aa18.13■□□□□ 0.49
USH1C-204ENST00000526313 CT47A1Q5JQC4 288 aaPredicted RBP18.13■□□□□ 0.49
USH1C-204ENST00000526313 POTEAQ6S8J7 498 aa18.13■□□□□ 0.49
USH1C-204ENST00000526313 RASGRP4Q8TDF6 673 aa18.13■□□□□ 0.49
USH1C-204ENST00000526313 DHX58Q96C10 678 aa18.13■□□□□ 0.49
USH1C-204ENST00000526313 PAGE5Q96GU1 130 aa18.13■□□□□ 0.49
USH1C-204ENST00000526313 PYM1Q9BRP8 204 aaKnown RBP18.13■□□□□ 0.49
USH1C-204ENST00000526313 MTMR7Q9Y216 660 aa18.13■□□□□ 0.49
USH1C-204ENST00000526313 ESYT2A0FGR8 921 aa18.13■□□□□ 0.49
USH1C-204ENST00000526313 hCG_1984214I3L0E3 225 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms