RNA–Protein interactions for RNA: ENST00000526161.5

TRIM29-208, Transcript of tripartite motif containing 29, humanhuman

TSL 1 (best)

Gene TRIM29, Length 1,836 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-208ENST00000526161 FBXO28Q9NVF7 368 aa18.19■□□□□ 0.5
TRIM29-208ENST00000526161 BMP3P12645 472 aa18.18■□□□□ 0.5
TRIM29-208ENST00000526161 CASTP20810 708 aaKnown RBP18.18■□□□□ 0.5
TRIM29-208ENST00000526161 PSMA5P28066 241 aa18.18■□□□□ 0.5
TRIM29-208ENST00000526161 HERVK_113P62684 666 aa18.18■□□□□ 0.5
TRIM29-208ENST00000526161 COG2Q14746 738 aa18.18■□□□□ 0.5
TRIM29-208ENST00000526161 BLOC1S2Q6QNY1 142 aa18.18■□□□□ 0.5
TRIM29-208ENST00000526161 KCTD1Q719H9 257 aa18.18■□□□□ 0.5
TRIM29-208ENST00000526161 GMCL1Q96IK5 515 aa18.18■□□□□ 0.5
TRIM29-208ENST00000526161 TMEM87BQ96K49 555 aa18.18■□□□□ 0.5
TRIM29-208ENST00000526161 LOC285556D6RIA3 1793 aa18.17■□□□□ 0.5
TRIM29-208ENST00000526161 GPR25O00155 361 aa18.17■□□□□ 0.5
TRIM29-208ENST00000526161 CTCFP49711 727 aaPredicted RBP18.17■□□□□ 0.5
TRIM29-208ENST00000526161 LBX1P52954 281 aa18.17■□□□□ 0.5
TRIM29-208ENST00000526161 EXOSC10Q01780 885 aaKnown RBP18.17■□□□□ 0.5
TRIM29-208ENST00000526161 CCDC96Q2M329 555 aa18.17■□□□□ 0.5
TRIM29-208ENST00000526161 TMEM232C9JQI7 657 aa18.16■□□□□ 0.5
TRIM29-208ENST00000526161 PEX10O60683 326 aa18.16■□□□□ 0.5
TRIM29-208ENST00000526161 HSPA8P11142 646 aaKnown RBP18.16■□□□□ 0.5
TRIM29-208ENST00000526161 PDHBP11177 359 aa18.16■□□□□ 0.5
TRIM29-208ENST00000526161 C17orf99Q6UX52 265 aa18.16■□□□□ 0.5
TRIM29-208ENST00000526161 ANKRD13CQ8N6S4 541 aa18.16■□□□□ 0.5
TRIM29-208ENST00000526161 LY9Q9HBG7 655 aa18.16■□□□□ 0.5
TRIM29-208ENST00000526161 HOXC10Q9NYD6 342 aa18.16■□□□□ 0.5
TRIM29-208ENST00000526161 FRMPD2Q68DX3 1309 aaPredicted RBP18.16■□□□□ 0.5
TRIM29-208ENST00000526161 SPDYE16A6NNV3 312 aaPredicted RBP18.16■□□□□ 0.5
TRIM29-208ENST00000526161 SH2B2O14492 632 aaPredicted RBP18.16■□□□□ 0.5
TRIM29-208ENST00000526161 ECM2O94769 699 aaPredicted RBP18.16■□□□□ 0.5
TRIM29-208ENST00000526161 IKQ13123 557 aaPredicted RBP18.16■□□□□ 0.5
TRIM29-208ENST00000526161 NFXL1Q6ZNB6 911 aa18.16■□□□□ 0.5
TRIM29-208ENST00000526161 DCAF4Q8WV16 495 aa18.16■□□□□ 0.5
TRIM29-208ENST00000526161 MTA3Q9BTC8 594 aa18.16■□□□□ 0.5
TRIM29-208ENST00000526161 PAGR1Q9BTK6 254 aa18.16■□□□□ 0.5
TRIM29-208ENST00000526161 ADGRA2Q96PE1 1338 aa18.15■□□□□ 0.5
TRIM29-208ENST00000526161 GCLCP48506 637 aaPredicted RBP18.15■□□□□ 0.5
TRIM29-208ENST00000526161 FGD1P98174 961 aa18.15■□□□□ 0.5
TRIM29-208ENST00000526161 ZNF296Q8WUU4 475 aaPredicted RBP18.15■□□□□ 0.5
TRIM29-208ENST00000526161 KIFC2Q96AC6 838 aa18.15■□□□□ 0.5
TRIM29-208ENST00000526161 GPCPD1Q9NPB8 672 aa18.15■□□□□ 0.5
TRIM29-208ENST00000526161 CCDC69A6NI79 296 aa18.14■□□□□ 0.5
TRIM29-208ENST00000526161 GOLGA8HP0CJ92 632 aa18.14■□□□□ 0.5
TRIM29-208ENST00000526161 RPS6KB1P23443 525 aa18.14■□□□□ 0.5
TRIM29-208ENST00000526161 DSG3P32926 999 aa18.14■□□□□ 0.5
TRIM29-208ENST00000526161 STAT2P52630 851 aa18.14■□□□□ 0.5
TRIM29-208ENST00000526161 ANAPC15P60006 121 aa18.14■□□□□ 0.5
TRIM29-208ENST00000526161 SP3Q02447 781 aa18.14■□□□□ 0.5
TRIM29-208ENST00000526161 POTEEQ6S8J3 1075 aa18.14■□□□□ 0.5
TRIM29-208ENST00000526161 TMTC2Q8N394 836 aa18.14■□□□□ 0.5
TRIM29-208ENST00000526161 ATG4CQ96DT6 458 aa18.14■□□□□ 0.5
TRIM29-208ENST00000526161 SLF1Q9BQI6 1058 aa18.14■□□□□ 0.5
TRIM29-208ENST00000526161 UPF3BQ9BZI7 483 aaKnown RBP18.14■□□□□ 0.5
TRIM29-208ENST00000526161 ZSWIM6Q9HCJ5 1215 aa18.14■□□□□ 0.5
TRIM29-208ENST00000526161 TXNRD2Q9NNW7 524 aa18.14■□□□□ 0.5
TRIM29-208ENST00000526161 RBPJLQ9UBG7 517 aa18.14■□□□□ 0.5
TRIM29-208ENST00000526161 FEM1BQ9UK73 627 aa18.14■□□□□ 0.5
TRIM29-208ENST00000526161 WDR19Q8NEZ3 1342 aa18.14■□□□□ 0.49
TRIM29-208ENST00000526161 SNHG28P0DPA3 235 aa18.14■□□□□ 0.49
TRIM29-208ENST00000526161 BCRP11274 1271 aa18.14■□□□□ 0.49
TRIM29-208ENST00000526161 TTBK2Q6IQ55 1244 aa18.14■□□□□ 0.49
TRIM29-208ENST00000526161 RUFY3Q7L099 469 aa18.14■□□□□ 0.49
TRIM29-208ENST00000526161 CATIPQ7Z7H3 387 aa18.14■□□□□ 0.49
TRIM29-208ENST00000526161 PRPF38AQ8NAV1 312 aaKnown RBP18.14■□□□□ 0.49
TRIM29-208ENST00000526161 UPF2Q9HAU5 1272 aaKnown RBP18.14■□□□□ 0.49
TRIM29-208ENST00000526161 PPP1R9AQ9ULJ8 1098 aa18.14■□□□□ 0.49
TRIM29-208ENST00000526161 CYP46A1Q9Y6A2 500 aa18.14■□□□□ 0.49
TRIM29-208ENST00000526161 MYH4Q9Y623 1939 aa18.13■□□□□ 0.49
TRIM29-208ENST00000526161 FKTNO75072 461 aa18.13■□□□□ 0.49
TRIM29-208ENST00000526161 SLC16A2P36021 539 aa18.13■□□□□ 0.49
TRIM29-208ENST00000526161 LIFRP42702 1097 aa18.13■□□□□ 0.49
TRIM29-208ENST00000526161 ZNF543Q08ER8 600 aa18.13■□□□□ 0.49
TRIM29-208ENST00000526161 CHURC1Q8WUH1 139 aa18.13■□□□□ 0.49
TRIM29-208ENST00000526161 NUP133Q8WUM0 1156 aa18.13■□□□□ 0.49
TRIM29-208ENST00000526161 MYL10Q9BUA6 226 aa18.13■□□□□ 0.49
TRIM29-208ENST00000526161 C22orf23Q9BZE7 217 aa18.13■□□□□ 0.49
TRIM29-208ENST00000526161 TM6SF1Q9BZW5 370 aa18.13■□□□□ 0.49
TRIM29-208ENST00000526161 FAM110CQ1W6H9 321 aa18.12■□□□□ 0.49
TRIM29-208ENST00000526161 NOM1Q5C9Z4 860 aaKnown RBP18.12■□□□□ 0.49
TRIM29-208ENST00000526161 LBX2Q6XYB7 198 aa18.12■□□□□ 0.49
TRIM29-208ENST00000526161 Q6ZUG5 572 aa18.12■□□□□ 0.49
TRIM29-208ENST00000526161 GTF3C2Q8WUA4 911 aaPredicted RBP18.12■□□□□ 0.49
TRIM29-208ENST00000526161 BACH2Q9BYV9 841 aa18.12■□□□□ 0.49
TRIM29-208ENST00000526161 MYPNQ86TC9 1320 aa18.12■□□□□ 0.49
TRIM29-208ENST00000526161 PARP1P09874 1014 aaKnown RBP18.12■□□□□ 0.49
TRIM29-208ENST00000526161 TROAPQ12815 778 aa18.12■□□□□ 0.49
TRIM29-208ENST00000526161 GPATCH4Q5T3I0 446 aaKnown RBP18.12■□□□□ 0.49
TRIM29-208ENST00000526161 FAM160B2Q86V87 743 aa18.12■□□□□ 0.49
TRIM29-208ENST00000526161 ZNF654Q8IZM8 581 aa18.12■□□□□ 0.49
TRIM29-208ENST00000526161 GPRC5AQ8NFJ5 357 aa18.12■□□□□ 0.49
TRIM29-208ENST00000526161 BTBD7Q9P203 1132 aa18.12■□□□□ 0.49
TRIM29-208ENST00000526161 RABGAP1Q9Y3P9 1069 aa18.12■□□□□ 0.49
TRIM29-208ENST00000526161 SLC12A7Q9Y666 1083 aa18.12■□□□□ 0.49
TRIM29-208ENST00000526161 VWA5AO00534 786 aa18.11■□□□□ 0.49
TRIM29-208ENST00000526161 ERVK-9P63128 1117 aa18.11■□□□□ 0.49
TRIM29-208ENST00000526161 ERVK-24P63145 666 aa18.11■□□□□ 0.49
TRIM29-208ENST00000526161 PLS1Q14651 629 aa18.11■□□□□ 0.49
TRIM29-208ENST00000526161 Q3C1V9 767 aa18.11■□□□□ 0.49
TRIM29-208ENST00000526161 RAB11FIP4Q86YS3 637 aa18.11■□□□□ 0.49
TRIM29-208ENST00000526161 CPVLQ9H3G5 476 aa18.11■□□□□ 0.49
TRIM29-208ENST00000526161 CNMDO75829 334 aa18.1■□□□□ 0.49
TRIM29-208ENST00000526161 RXRAP19793 462 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms