RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 CHMP4BQ9H444 224 aaKnown RBP5.33□□□□□ -1.56
CD44-213ENST00000525209 CD248Q9HCU0 757 aa5.33□□□□□ -1.56
CD44-213ENST00000525209 SMYD2Q9NRG4 433 aa5.33□□□□□ -1.56
CD44-213ENST00000525209 SAP30BPQ9UHR5 308 aaKnown RBP5.33□□□□□ -1.56
CD44-213ENST00000525209 FBXO10Q9UK96 956 aa5.33□□□□□ -1.56
CD44-213ENST00000525209 AFG3L2Q9Y4W6 797 aa5.33□□□□□ -1.56
CD44-213ENST00000525209 LRRFIP2Q9Y608 721 aaKnown RBP5.33□□□□□ -1.56
CD44-213ENST00000525209 USP3Q9Y6I4 520 aa5.33□□□□□ -1.56
CD44-213ENST00000525209 ERBB4Q15303 1308 aa5.32□□□□□ -1.56
CD44-213ENST00000525209 ERVH48-1M5A8F1 160 aa5.32□□□□□ -1.56
CD44-213ENST00000525209 TMCC2O75069 709 aa5.32□□□□□ -1.56
CD44-213ENST00000525209 DNAJC8O75937 253 aaPredicted RBP5.32□□□□□ -1.56
CD44-213ENST00000525209 APBA3O96018 575 aa5.32□□□□□ -1.56
CD44-213ENST00000525209 F13A1P00488 732 aa5.32□□□□□ -1.56
CD44-213ENST00000525209 ASGR2P07307 311 aa5.32□□□□□ -1.56
CD44-213ENST00000525209 BMP2P12643 396 aa5.32□□□□□ -1.56
CD44-213ENST00000525209 ZKSCAN1P17029 563 aaPredicted RBP5.32□□□□□ -1.56
CD44-213ENST00000525209 PSMA3P25788 255 aa5.32□□□□□ -1.56
CD44-213ENST00000525209 STT3AP46977 705 aa5.32□□□□□ -1.56
CD44-213ENST00000525209 FCGRTP55899 365 aa5.32□□□□□ -1.56
CD44-213ENST00000525209 RAB15P59190 212 aa5.32□□□□□ -1.56
CD44-213ENST00000525209 ROR1Q01973 937 aa5.32□□□□□ -1.56
CD44-213ENST00000525209 CLCQ05315 142 aa5.32□□□□□ -1.56
CD44-213ENST00000525209 SFSWAPQ12872 951 aaKnown RBP5.32□□□□□ -1.56
CD44-213ENST00000525209 PRKG2Q13237 762 aa5.32□□□□□ -1.56
CD44-213ENST00000525209 GRB10Q13322 594 aa5.32□□□□□ -1.56
CD44-213ENST00000525209 MPP2Q14168 576 aa5.32□□□□□ -1.56
CD44-213ENST00000525209 TEAD4Q15561 434 aa5.32□□□□□ -1.56
CD44-213ENST00000525209 PDCD2Q16342 344 aaPredicted RBP5.32□□□□□ -1.56
CD44-213ENST00000525209 HEATR6Q6AI08 1181 aaKnown RBP5.32□□□□□ -1.56
CD44-213ENST00000525209 PDE12Q6L8Q7 609 aaKnown RBP5.32□□□□□ -1.56
CD44-213ENST00000525209 FAM180BQ6P0A1 224 aa5.32□□□□□ -1.56
CD44-213ENST00000525209 CHST15Q7LFX5 561 aaPredicted RBP5.32□□□□□ -1.56
CD44-213ENST00000525209 ZNF438Q7Z4V0 828 aa5.32□□□□□ -1.56
CD44-213ENST00000525209 SAPCD2Q86UD0 394 aa5.32□□□□□ -1.56
CD44-213ENST00000525209 CCDC84Q86UT8 332 aaPredicted RBP5.32□□□□□ -1.56
CD44-213ENST00000525209 SLC41A1Q8IVJ1 513 aa5.32□□□□□ -1.56
CD44-213ENST00000525209 TRMT44Q8IYL2 757 aaKnown RBP5.32□□□□□ -1.56
CD44-213ENST00000525209 FAM43AQ8N2R8 423 aa5.32□□□□□ -1.56
CD44-213ENST00000525209 CBARPQ8N350 705 aaPredicted RBP5.32□□□□□ -1.56
CD44-213ENST00000525209 GATAD2BQ8WXI9 593 aa5.32□□□□□ -1.56
CD44-213ENST00000525209 CCT6BQ92526 530 aa5.32□□□□□ -1.56
CD44-213ENST00000525209 JARID2Q92833 1246 aaPredicted RBP5.32□□□□□ -1.56
CD44-213ENST00000525209 CCDC47Q96A33 483 aaKnown RBP5.32□□□□□ -1.56
CD44-213ENST00000525209 GCC1Q96CN9 775 aa5.32□□□□□ -1.56
CD44-213ENST00000525209 FUBP3Q96I24 572 aaKnown RBP eCLIP5.32□□□□□ -1.56
CD44-213ENST00000525209 TTC1Q99614 292 aa5.32□□□□□ -1.56
CD44-213ENST00000525209 MTFR1LQ9H019 292 aa5.32□□□□□ -1.56
CD44-213ENST00000525209 CXorf56Q9H5V9 222 aa5.32□□□□□ -1.56
CD44-213ENST00000525209 ALG13Q9NP73 1137 aaKnown RBP5.32□□□□□ -1.56
CD44-213ENST00000525209 BLOC1S4Q9NUP1 217 aa5.32□□□□□ -1.56
CD44-213ENST00000525209 FNIP2Q9P278 1114 aa5.32□□□□□ -1.56
CD44-213ENST00000525209 SUCOQ9UBS9 1254 aaKnown RBP5.32□□□□□ -1.56
CD44-213ENST00000525209 PTPN22Q9Y2R2 807 aa5.32□□□□□ -1.56
CD44-213ENST00000525209 GPR52Q9Y2T5 361 aa5.32□□□□□ -1.56
CD44-213ENST00000525209 GIT1Q9Y2X7 761 aa5.32□□□□□ -1.56
CD44-213ENST00000525209 EIF4G1Q04637 1599 aaKnown RBP5.31□□□□□ -1.56
CD44-213ENST00000525209 FAM221AA4D161 298 aa5.31□□□□□ -1.56
CD44-213ENST00000525209 K7ESF4 209 aa5.31□□□□□ -1.56
CD44-213ENST00000525209 NEMP1O14524 444 aa5.31□□□□□ -1.56
CD44-213ENST00000525209 WIPF1O43516 503 aa5.31□□□□□ -1.56
CD44-213ENST00000525209 ZEB2O60315 1214 aa5.31□□□□□ -1.56
CD44-213ENST00000525209 MBD4O95243 580 aa5.31□□□□□ -1.56
CD44-213ENST00000525209 CELA3AP09093 270 aa5.31□□□□□ -1.56
CD44-213ENST00000525209 GLULP15104 373 aa5.31□□□□□ -1.56
CD44-213ENST00000525209 BPIP17213 487 aa5.31□□□□□ -1.56
CD44-213ENST00000525209 CCND1P24385 295 aa5.31□□□□□ -1.56
CD44-213ENST00000525209 ADD2P35612 726 aa5.31□□□□□ -1.56
CD44-213ENST00000525209 FLT3P36888 993 aa5.31□□□□□ -1.56
CD44-213ENST00000525209 GMPRP36959 345 aa5.31□□□□□ -1.56
CD44-213ENST00000525209 PIK3CAP42336 1068 aa5.31□□□□□ -1.56
CD44-213ENST00000525209 GRK6P43250 576 aa5.31□□□□□ -1.56
CD44-213ENST00000525209 PFKPQ01813 784 aa5.31□□□□□ -1.56
CD44-213ENST00000525209 TRIM14Q14142 442 aa5.31□□□□□ -1.56
CD44-213ENST00000525209 SEPT7Q16181 437 aaKnown RBP5.31□□□□□ -1.56
CD44-213ENST00000525209 ABCB5Q2M3G0 1257 aa5.31□□□□□ -1.56
CD44-213ENST00000525209 NBPF8Q3BBV2 869 aa5.31□□□□□ -1.56
CD44-213ENST00000525209 FAM209AQ5JX71 171 aa5.31□□□□□ -1.56
CD44-213ENST00000525209 KIAA1614Q5VZ46 1190 aa5.31□□□□□ -1.56
CD44-213ENST00000525209 BNC2Q6ZN30 1099 aaPredicted RBP5.31□□□□□ -1.56
CD44-213ENST00000525209 RUFY4Q6ZNE9 571 aa5.31□□□□□ -1.56
CD44-213ENST00000525209 GK5Q6ZS86 529 aa5.31□□□□□ -1.56
CD44-213ENST00000525209 BRINP3Q76B58 766 aa5.31□□□□□ -1.56
CD44-213ENST00000525209 TTC6Q86TZ1 520 aa5.31□□□□□ -1.56
CD44-213ENST00000525209 SNX32Q86XE0 403 aa5.31□□□□□ -1.56
CD44-213ENST00000525209 CCDC116Q8IYX3 515 aa5.31□□□□□ -1.56
CD44-213ENST00000525209 LINC00528Q8N1L1 170 aa5.31□□□□□ -1.56
CD44-213ENST00000525209 MEIOBQ8N635 442 aa5.31□□□□□ -1.56
CD44-213ENST00000525209 LSM14AQ8ND56 463 aaKnown RBP5.31□□□□□ -1.56
CD44-213ENST00000525209 SLC16A10Q8TF71 515 aa5.31□□□□□ -1.56
CD44-213ENST00000525209 USP7Q93009 1102 aa5.31□□□□□ -1.56
CD44-213ENST00000525209 KCTD15Q96SI1 283 aaPredicted RBP5.31□□□□□ -1.56
CD44-213ENST00000525209 AP1M1Q9BXS5 423 aa5.31□□□□□ -1.56
CD44-213ENST00000525209 OXCT2Q9BYC2 517 aaPredicted RBP5.31□□□□□ -1.56
CD44-213ENST00000525209 PDGFDQ9GZP0 370 aaPredicted RBP5.31□□□□□ -1.56
CD44-213ENST00000525209 SLC12A5Q9H2X9 1139 aa5.31□□□□□ -1.56
CD44-213ENST00000525209 IFT22Q9H7X7 185 aa5.31□□□□□ -1.56
CD44-213ENST00000525209 BRMS1Q9HCU9 246 aa5.31□□□□□ -1.56
CD44-213ENST00000525209 TBC1D22BQ9NU19 505 aa5.31□□□□□ -1.56
CD44-213ENST00000525209 PDP2Q9P2J9 529 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms