RNA–Protein interactions for RNA: ENST00000525009.5

ATG13-204, Transcript of autophagy related 13, humanhuman

TSL 3

Gene ATG13, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-204ENST00000525009 FAM177A1Q8N128 213 aaPredicted RBP12.3□□□□□ -0.44
ATG13-204ENST00000525009 GPC2Q8N158 579 aa12.3□□□□□ -0.44
ATG13-204ENST00000525009 USP28Q96RU2 1077 aa12.3□□□□□ -0.44
ATG13-204ENST00000525009 PHF20Q9BVI0 1012 aa12.3□□□□□ -0.44
ATG13-204ENST00000525009 BRMS1Q9HCU9 246 aa12.3□□□□□ -0.44
ATG13-204ENST00000525009 RTEL1Q9NZ71 1219 aa12.3□□□□□ -0.44
ATG13-204ENST00000525009 KCNJ14Q9UNX9 436 aa12.3□□□□□ -0.44
ATG13-204ENST00000525009 ZNF541Q9H0D2 1346 aa12.3□□□□□ -0.44
ATG13-204ENST00000525009 hCG_1642624A0A1W2PR95 340 aa12.29□□□□□ -0.44
ATG13-204ENST00000525009 USP17L5A8MUK1 530 aa12.29□□□□□ -0.44
ATG13-204ENST00000525009 BTBD18B2RXH4 712 aa12.29□□□□□ -0.44
ATG13-204ENST00000525009 YEATS4O95619 227 aa12.29□□□□□ -0.44
ATG13-204ENST00000525009 GOLGA8HP0CJ92 632 aa12.29□□□□□ -0.44
ATG13-204ENST00000525009 EEF2P13639 858 aaKnown RBP12.29□□□□□ -0.44
ATG13-204ENST00000525009 KRT2P35908 639 aa12.29□□□□□ -0.44
ATG13-204ENST00000525009 ATP2B2Q01814 1243 aa12.29□□□□□ -0.44
ATG13-204ENST00000525009 MAP3K10Q02779 954 aa12.29□□□□□ -0.44
ATG13-204ENST00000525009 SEPT2Q15019 361 aa12.29□□□□□ -0.44
ATG13-204ENST00000525009 KIF4BQ2VIQ3 1234 aa12.29□□□□□ -0.44
ATG13-204ENST00000525009 GPATCH4Q5T3I0 446 aaKnown RBP12.29□□□□□ -0.44
ATG13-204ENST00000525009 SAMD7Q7Z3H4 446 aa12.29□□□□□ -0.44
ATG13-204ENST00000525009 NOSTRINQ8IVI9 506 aa12.29□□□□□ -0.44
ATG13-204ENST00000525009 LRRC47Q8N1G4 583 aaKnown RBP12.29□□□□□ -0.44
ATG13-204ENST00000525009 RRP36Q96EU6 259 aaKnown RBP12.29□□□□□ -0.44
ATG13-204ENST00000525009 TMEM39BQ9GZU3 492 aa12.29□□□□□ -0.44
ATG13-204ENST00000525009 POLR3EQ9NVU0 708 aa12.29□□□□□ -0.44
ATG13-204ENST00000525009 VPS54Q9P1Q0 977 aa12.29□□□□□ -0.44
ATG13-204ENST00000525009 SYNPO2Q9UMS6 1093 aa12.29□□□□□ -0.44
ATG13-204ENST00000525009 SIPA1L1O43166 1804 aa12.28□□□□□ -0.44
ATG13-204ENST00000525009 GDF11O95390 407 aa12.28□□□□□ -0.44
ATG13-204ENST00000525009 GH2P01242 217 aa12.28□□□□□ -0.44
ATG13-204ENST00000525009 CALML3P27482 149 aa12.28□□□□□ -0.44
ATG13-204ENST00000525009 NLRP5P59047 1200 aa12.28□□□□□ -0.44
ATG13-204ENST00000525009 CEBPZQ03701 1054 aaKnown RBP12.28□□□□□ -0.44
ATG13-204ENST00000525009 ICA1Q05084 483 aa12.28□□□□□ -0.44
ATG13-204ENST00000525009 ZNF543Q08ER8 600 aa12.28□□□□□ -0.44
ATG13-204ENST00000525009 RASA3Q14644 834 aa12.28□□□□□ -0.44
ATG13-204ENST00000525009 TBC1D10BQ4KMP7 808 aaPredicted RBP12.28□□□□□ -0.44
ATG13-204ENST00000525009 ANO1Q5XXA6 986 aa12.28□□□□□ -0.44
ATG13-204ENST00000525009 DPY19L2Q6NUT2 758 aa12.28□□□□□ -0.44
ATG13-204ENST00000525009 CLEC10AQ8IUN9 316 aa12.28□□□□□ -0.44
ATG13-204ENST00000525009 RIOX1Q9H6W3 641 aa12.28□□□□□ -0.44
ATG13-204ENST00000525009 GPRC5DQ9NZD1 345 aa12.28□□□□□ -0.44
ATG13-204ENST00000525009 PGAP2Q9UHJ9 254 aa12.28□□□□□ -0.44
ATG13-204ENST00000525009 CYTH3O43739 400 aa12.27□□□□□ -0.45
ATG13-204ENST00000525009 LETM1O95202 739 aaPredicted RBP12.27□□□□□ -0.45
ATG13-204ENST00000525009 EGFRP00533 1210 aa12.27□□□□□ -0.45
ATG13-204ENST00000525009 NASPP49321 788 aaPredicted RBP12.27□□□□□ -0.45
ATG13-204ENST00000525009 STK38Q15208 465 aa12.27□□□□□ -0.45
ATG13-204ENST00000525009 SF3A1Q15459 793 aaKnown RBP12.27□□□□□ -0.45
ATG13-204ENST00000525009 RILPL1Q5EBL4 403 aa12.27□□□□□ -0.45
ATG13-204ENST00000525009 GALNT17Q6IS24 598 aa12.27□□□□□ -0.45
ATG13-204ENST00000525009 SIAH1Q8IUQ4 282 aa12.27□□□□□ -0.45
ATG13-204ENST00000525009 LINC00301Q8NCQ3 95 aa12.27□□□□□ -0.45
ATG13-204ENST00000525009 GMCL1P1Q8NEA9 526 aa12.27□□□□□ -0.45
ATG13-204ENST00000525009 CCDC148Q8NFR7 591 aa12.27□□□□□ -0.45
ATG13-204ENST00000525009 KCNG4Q8TDN1 519 aa12.27□□□□□ -0.45
ATG13-204ENST00000525009 CCDC12Q8WUD4 166 aaPredicted RBP12.27□□□□□ -0.45
ATG13-204ENST00000525009 DCAF4Q8WV16 495 aa12.27□□□□□ -0.45
ATG13-204ENST00000525009 PIBF1Q8WXW3 757 aa12.27□□□□□ -0.45
ATG13-204ENST00000525009 SEC63Q9UGP8 760 aaKnown RBP12.27□□□□□ -0.45
ATG13-204ENST00000525009 HACL1Q9UJ83 578 aa12.27□□□□□ -0.45
ATG13-204ENST00000525009 CLIC4Q9Y696 253 aa12.27□□□□□ -0.45
ATG13-204ENST00000525009 FRMPD2Q68DX3 1309 aaPredicted RBP12.27□□□□□ -0.45
ATG13-204ENST00000525009 hCG_1984214I3L0E3 225 aa12.26□□□□□ -0.45
ATG13-204ENST00000525009 POTEIP0CG38 1075 aa12.26□□□□□ -0.45
ATG13-204ENST00000525009 POTEJP0CG39 1038 aa12.26□□□□□ -0.45
ATG13-204ENST00000525009 CAP2P40123 477 aa12.26□□□□□ -0.45
ATG13-204ENST00000525009 RRP1BQ14684 758 aaKnown RBP12.26□□□□□ -0.45
ATG13-204ENST00000525009 CCDC96Q2M329 555 aa12.26□□□□□ -0.45
ATG13-204ENST00000525009 SLC35G1Q2M3R5 365 aa12.26□□□□□ -0.45
ATG13-204ENST00000525009 ZSCAN23Q3MJ62 389 aa12.26□□□□□ -0.45
ATG13-204ENST00000525009 SLFN13Q68D06 897 aa12.26□□□□□ -0.45
ATG13-204ENST00000525009 MIGA2Q7L4E1 593 aa12.26□□□□□ -0.45
ATG13-204ENST00000525009 APOBEC3FQ8IUX4 373 aaKnown RBP12.26□□□□□ -0.45
ATG13-204ENST00000525009 ZNF713Q8N859 430 aaPredicted RBP12.26□□□□□ -0.45
ATG13-204ENST00000525009 SHISA4Q96DD7 197 aa12.26□□□□□ -0.45
ATG13-204ENST00000525009 HOOK2Q96ED9 719 aa12.26□□□□□ -0.45
ATG13-204ENST00000525009 PGBD1Q96JS3 809 aa12.26□□□□□ -0.45
ATG13-204ENST00000525009 UBA5Q9GZZ9 404 aa12.26□□□□□ -0.45
ATG13-204ENST00000525009 ARHGEF10LQ9HCE6 1279 aa12.26□□□□□ -0.45
ATG13-204ENST00000525009 VAT1LQ9HCJ6 419 aa12.26□□□□□ -0.45
ATG13-204ENST00000525009 GPCPD1Q9NPB8 672 aa12.26□□□□□ -0.45
ATG13-204ENST00000525009 BARHL2Q9NY43 387 aa12.26□□□□□ -0.45
ATG13-204ENST00000525009 TMEM63CQ9P1W3 806 aa12.26□□□□□ -0.45
ATG13-204ENST00000525009 GREB1LQ9C091 1923 aaPredicted RBP12.26□□□□□ -0.45
ATG13-204ENST00000525009 PASKQ96RG2 1323 aa12.26□□□□□ -0.45
ATG13-204ENST00000525009 MYH8P13535 1937 aa12.25□□□□□ -0.45
ATG13-204ENST00000525009 F5H6K3 240 aa12.25□□□□□ -0.45
ATG13-204ENST00000525009 SPTLC2O15270 562 aa12.25□□□□□ -0.45
ATG13-204ENST00000525009 PPP6R2O75170 966 aa12.25□□□□□ -0.45
ATG13-204ENST00000525009 SLC1A4P43007 532 aa12.25□□□□□ -0.45
ATG13-204ENST00000525009 ME1P48163 572 aa12.25□□□□□ -0.45
ATG13-204ENST00000525009 ZNF445P59923 1031 aa12.25□□□□□ -0.45
ATG13-204ENST00000525009 JAG1P78504 1218 aa12.25□□□□□ -0.45
ATG13-204ENST00000525009 KLRC3Q07444 240 aa12.25□□□□□ -0.45
ATG13-204ENST00000525009 NR5A1Q13285 461 aa12.25□□□□□ -0.45
ATG13-204ENST00000525009 SLC39A14Q15043 492 aa12.25□□□□□ -0.45
ATG13-204ENST00000525009 SHROOM1Q2M3G4 852 aaPredicted RBP12.25□□□□□ -0.45
ATG13-204ENST00000525009 TPRNQ4KMQ1 711 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms