RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 SH2B2O14492 632 aaPredicted RBP5.4□□□□□ -1.54
CHMP4A-202ENST00000524955 TLR2O60603 784 aa5.4□□□□□ -1.54
CHMP4A-202ENST00000524955 CNMDO75829 334 aa5.4□□□□□ -1.54
CHMP4A-202ENST00000524955 PDHBP11177 359 aa5.4□□□□□ -1.54
CHMP4A-202ENST00000524955 BMP3P12645 472 aa5.4□□□□□ -1.54
CHMP4A-202ENST00000524955 SLC1A4P43007 532 aa5.4□□□□□ -1.54
CHMP4A-202ENST00000524955 HERVK_113P62684 666 aa5.4□□□□□ -1.54
CHMP4A-202ENST00000524955 EXOSC10Q01780 885 aaKnown RBP5.4□□□□□ -1.54
CHMP4A-202ENST00000524955 APOBRQ0VD83 1088 aa5.4□□□□□ -1.54
CHMP4A-202ENST00000524955 USP17L24Q0WX57 530 aa5.4□□□□□ -1.54
CHMP4A-202ENST00000524955 WTAPQ15007 396 aa5.4□□□□□ -1.54
CHMP4A-202ENST00000524955 WDR78Q5VTH9 848 aa5.4□□□□□ -1.54
CHMP4A-202ENST00000524955 CCDC174Q6PII3 467 aa5.4□□□□□ -1.54
CHMP4A-202ENST00000524955 BLOC1S2Q6QNY1 142 aa5.4□□□□□ -1.54
CHMP4A-202ENST00000524955 Q6ZUG5 572 aa5.4□□□□□ -1.54
CHMP4A-202ENST00000524955 CPXCR1Q8N123 301 aa5.4□□□□□ -1.54
CHMP4A-202ENST00000524955 CMTR1Q8N1G2 835 aaKnown RBP5.4□□□□□ -1.54
CHMP4A-202ENST00000524955 CCDC82Q8N4S0 544 aa5.4□□□□□ -1.54
CHMP4A-202ENST00000524955 PNMA1Q8ND90 353 aa5.4□□□□□ -1.54
CHMP4A-202ENST00000524955 BRF1Q92994 677 aa5.4□□□□□ -1.54
CHMP4A-202ENST00000524955 MKL1Q969V6 931 aa5.4□□□□□ -1.54
CHMP4A-202ENST00000524955 C12orf42Q96LP6 360 aa5.4□□□□□ -1.54
CHMP4A-202ENST00000524955 TBC1D2Q9BYX2 928 aa5.4□□□□□ -1.54
CHMP4A-202ENST00000524955 PORCNQ9H237 461 aa5.4□□□□□ -1.54
CHMP4A-202ENST00000524955 SH2D4AQ9H788 454 aa5.4□□□□□ -1.54
CHMP4A-202ENST00000524955 LY9Q9HBG7 655 aa5.4□□□□□ -1.54
CHMP4A-202ENST00000524955 RAVER2Q9HCJ3 691 aaKnown RBP5.4□□□□□ -1.54
CHMP4A-202ENST00000524955 VAT1LQ9HCJ6 419 aa5.4□□□□□ -1.54
CHMP4A-202ENST00000524955 GINM1Q9NU53 330 aa5.4□□□□□ -1.54
CHMP4A-202ENST00000524955 TCP11L1Q9NUJ3 509 aa5.4□□□□□ -1.54
CHMP4A-202ENST00000524955 BTBD7Q9P203 1132 aa5.4□□□□□ -1.54
CHMP4A-202ENST00000524955 RBPJLQ9UBG7 517 aa5.4□□□□□ -1.54
CHMP4A-202ENST00000524955 BRPF3Q9ULD4 1205 aa5.4□□□□□ -1.54
CHMP4A-202ENST00000524955 THSD7BQ9C0I4 1608 aa5.4□□□□□ -1.55
CHMP4A-202ENST00000524955 ATAD5Q96QE3 1844 aa5.39□□□□□ -1.55
CHMP4A-202ENST00000524955 KLF18A0A0U1RQI7 1052 aa5.39□□□□□ -1.55
CHMP4A-202ENST00000524955 CCDC69A6NI79 296 aa5.39□□□□□ -1.55
CHMP4A-202ENST00000524955 WDR46O15213 610 aaKnown RBP5.39□□□□□ -1.55
CHMP4A-202ENST00000524955 DHX16O60231 1041 aaKnown RBP5.39□□□□□ -1.55
CHMP4A-202ENST00000524955 FKTNO75072 461 aa5.39□□□□□ -1.55
CHMP4A-202ENST00000524955 FMNL1O95466 1100 aaPredicted RBP5.39□□□□□ -1.55
CHMP4A-202ENST00000524955 ALDH1A1P00352 501 aa5.39□□□□□ -1.55
CHMP4A-202ENST00000524955 MYCP01106 439 aaPredicted RBP5.39□□□□□ -1.55
CHMP4A-202ENST00000524955 PCP11498 1178 aaKnown RBP5.39□□□□□ -1.55
CHMP4A-202ENST00000524955 RPS6KB1P23443 525 aa5.39□□□□□ -1.55
CHMP4A-202ENST00000524955 HOXA7P31268 230 aaPredicted RBP5.39□□□□□ -1.55
CHMP4A-202ENST00000524955 DSG3P32926 999 aa5.39□□□□□ -1.55
CHMP4A-202ENST00000524955 MCM5P33992 734 aa5.39□□□□□ -1.55
CHMP4A-202ENST00000524955 NOVP48745 357 aa5.39□□□□□ -1.55
CHMP4A-202ENST00000524955 CTCFP49711 727 aaPredicted RBP5.39□□□□□ -1.55
CHMP4A-202ENST00000524955 FGD1P98174 961 aa5.39□□□□□ -1.55
CHMP4A-202ENST00000524955 SP3Q02447 781 aa5.39□□□□□ -1.55
CHMP4A-202ENST00000524955 ZNF543Q08ER8 600 aa5.39□□□□□ -1.55
CHMP4A-202ENST00000524955 STK3Q13188 491 aa5.39□□□□□ -1.55
CHMP4A-202ENST00000524955 COG2Q14746 738 aa5.39□□□□□ -1.55
CHMP4A-202ENST00000524955 TMEM132BQ14DG7 1078 aa5.39□□□□□ -1.55
CHMP4A-202ENST00000524955 SLC35G1Q2M3R5 365 aa5.39□□□□□ -1.55
CHMP4A-202ENST00000524955 COL13A1Q5TAT6 717 aaPredicted RBP5.39□□□□□ -1.55
CHMP4A-202ENST00000524955 C17orf99Q6UX52 265 aa5.39□□□□□ -1.55
CHMP4A-202ENST00000524955 DHX32Q7L7V1 743 aaKnown RBP5.39□□□□□ -1.55
CHMP4A-202ENST00000524955 NBPF11Q86T75 865 aa5.39□□□□□ -1.55
CHMP4A-202ENST00000524955 MICU3Q86XE3 530 aa5.39□□□□□ -1.55
CHMP4A-202ENST00000524955 DGKHQ86XP1 1220 aa5.39□□□□□ -1.55
CHMP4A-202ENST00000524955 ZNF654Q8IZM8 581 aa5.39□□□□□ -1.55
CHMP4A-202ENST00000524955 GMCL1P1Q8NEA9 526 aa5.39□□□□□ -1.55
CHMP4A-202ENST00000524955 LPAR1Q92633 364 aa5.39□□□□□ -1.55
CHMP4A-202ENST00000524955 KCNB2Q92953 911 aa5.39□□□□□ -1.55
CHMP4A-202ENST00000524955 GMCL1Q96IK5 515 aa5.39□□□□□ -1.55
CHMP4A-202ENST00000524955 TRIM47Q96LD4 638 aa5.39□□□□□ -1.55
CHMP4A-202ENST00000524955 AGBL1Q96MI9 1066 aa5.39□□□□□ -1.55
CHMP4A-202ENST00000524955 TTC14Q96N46 770 aa5.39□□□□□ -1.55
CHMP4A-202ENST00000524955 PARK7Q99497 189 aaKnown RBP5.39□□□□□ -1.55
CHMP4A-202ENST00000524955 EFCC1Q9HA90 598 aa5.39□□□□□ -1.55
CHMP4A-202ENST00000524955 HOMER2Q9NSB8 354 aa5.39□□□□□ -1.55
CHMP4A-202ENST00000524955 GABRQQ9UN88 632 aa5.39□□□□□ -1.55
CHMP4A-202ENST00000524955 ADGRA2Q96PE1 1338 aa5.39□□□□□ -1.55
CHMP4A-202ENST00000524955 PHIPQ8WWQ0 1821 aa5.39□□□□□ -1.55
CHMP4A-202ENST00000524955 KLRF2D3W0D1 207 aa5.38□□□□□ -1.55
CHMP4A-202ENST00000524955 VWA5AO00534 786 aa5.38□□□□□ -1.55
CHMP4A-202ENST00000524955 PLEKHA8P1O95397 391 aa5.38□□□□□ -1.55
CHMP4A-202ENST00000524955 BCRP11274 1271 aa5.38□□□□□ -1.55
CHMP4A-202ENST00000524955 PSMC4P43686 418 aa5.38□□□□□ -1.55
CHMP4A-202ENST00000524955 NEK4P51957 841 aa5.38□□□□□ -1.55
CHMP4A-202ENST00000524955 STAT2P52630 851 aa5.38□□□□□ -1.55
CHMP4A-202ENST00000524955 CCT2P78371 535 aaKnown RBP5.38□□□□□ -1.55
CHMP4A-202ENST00000524955 LACTBP83111 547 aaPredicted RBP5.38□□□□□ -1.55
CHMP4A-202ENST00000524955 PABPC4Q13310 644 aaKnown RBP eCLIP5.38□□□□□ -1.55
CHMP4A-202ENST00000524955 TOB2Q14106 344 aaPredicted RBP5.38□□□□□ -1.55
CHMP4A-202ENST00000524955 KRT32Q14532 448 aa5.38□□□□□ -1.55
CHMP4A-202ENST00000524955 SART3Q15020 963 aaKnown RBP5.38□□□□□ -1.55
CHMP4A-202ENST00000524955 TSGA10IPQ3SY00 556 aa5.38□□□□□ -1.55
CHMP4A-202ENST00000524955 USH1GQ495M9 461 aa5.38□□□□□ -1.55
CHMP4A-202ENST00000524955 SYDE2Q5VT97 1194 aa5.38□□□□□ -1.55
CHMP4A-202ENST00000524955 RUFY3Q7L099 469 aa5.38□□□□□ -1.55
CHMP4A-202ENST00000524955 CATIPQ7Z7H3 387 aa5.38□□□□□ -1.55
CHMP4A-202ENST00000524955 NCAPG2Q86XI2 1143 aa5.38□□□□□ -1.55
CHMP4A-202ENST00000524955 HOMER1Q86YM7 354 aa5.38□□□□□ -1.55
CHMP4A-202ENST00000524955 REM2Q8IYK8 340 aaPredicted RBP5.38□□□□□ -1.55
CHMP4A-202ENST00000524955 ADGRF4Q8IZF3 695 aa5.38□□□□□ -1.55
CHMP4A-202ENST00000524955 ANKS1AQ92625 1134 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms