RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 PRUNE2Q8WUY3 3088 aa9.6□□□□□ -0.87
NEDD8-203ENST00000524927 EYSQ5T1H1 3165 aa9.6□□□□□ -0.87
NEDD8-203ENST00000524927 DCDC2BA2VCK2 349 aa9.59□□□□□ -0.87
NEDD8-203ENST00000524927 ADM5C9JUS6 153 aa9.59□□□□□ -0.87
NEDD8-203ENST00000524927 H7C1D1 291 aa9.59□□□□□ -0.87
NEDD8-203ENST00000524927 MAPTP10636 758 aaKnown RBP9.59□□□□□ -0.87
NEDD8-203ENST00000524927 CD33P20138 364 aa9.59□□□□□ -0.87
NEDD8-203ENST00000524927 TNP2Q05952 138 aa9.59□□□□□ -0.87
NEDD8-203ENST00000524927 DOC2BQ14184 412 aa9.59□□□□□ -0.87
NEDD8-203ENST00000524927 UBE2Q1Q7Z7E8 422 aa9.59□□□□□ -0.87
NEDD8-203ENST00000524927 DCPSQ96C86 337 aaKnown RBP9.59□□□□□ -0.87
NEDD8-203ENST00000524927 TRIM11Q96F44 468 aa9.59□□□□□ -0.87
NEDD8-203ENST00000524927 SETDB2Q96T68 719 aa9.59□□□□□ -0.87
NEDD8-203ENST00000524927 VPS33BQ9H267 617 aa9.59□□□□□ -0.87
NEDD8-203ENST00000524927 KIAA1522Q9P206 1035 aaPredicted RBP9.59□□□□□ -0.87
NEDD8-203ENST00000524927 ZNRF3Q9ULT6 936 aa9.59□□□□□ -0.87
NEDD8-203ENST00000524927 KCNMB2Q9Y691 235 aa9.59□□□□□ -0.87
NEDD8-203ENST00000524927 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.58□□□□□ -0.88
NEDD8-203ENST00000524927 ATXN7O15265 892 aaPredicted RBP9.58□□□□□ -0.88
NEDD8-203ENST00000524927 PRPF40AO75400 957 aaKnown RBP9.58□□□□□ -0.88
NEDD8-203ENST00000524927 ORC1Q13415 861 aa9.58□□□□□ -0.88
NEDD8-203ENST00000524927 ENOX2Q16206 610 aaKnown RBP9.58□□□□□ -0.88
NEDD8-203ENST00000524927 SAMD5Q5TGI4 173 aa9.58□□□□□ -0.88
NEDD8-203ENST00000524927 GDF15Q99988 308 aa9.58□□□□□ -0.88
NEDD8-203ENST00000524927 KRTAP9-2Q9BYQ4 174 aa9.58□□□□□ -0.88
NEDD8-203ENST00000524927 CNOT7Q9UIV1 285 aaKnown RBP9.58□□□□□ -0.88
NEDD8-203ENST00000524927 ZBTB1Q9Y2K1 713 aa9.58□□□□□ -0.88
NEDD8-203ENST00000524927 NCOR1O75376 2440 aa9.58□□□□□ -0.88
NEDD8-203ENST00000524927 FLT4P35916 1363 aa9.58□□□□□ -0.88
NEDD8-203ENST00000524927 KHNYNO15037 678 aaKnown RBP9.57□□□□□ -0.88
NEDD8-203ENST00000524927 XYLBO75191 536 aa9.57□□□□□ -0.88
NEDD8-203ENST00000524927 TNIP1Q15025 636 aa9.57□□□□□ -0.88
NEDD8-203ENST00000524927 TRIP4Q15650 581 aaPredicted RBP9.57□□□□□ -0.88
NEDD8-203ENST00000524927 ALG1LQ6GMV1 187 aa9.57□□□□□ -0.88
NEDD8-203ENST00000524927 PDE12Q6L8Q7 609 aaKnown RBP9.57□□□□□ -0.88
NEDD8-203ENST00000524927 SHISA4Q96DD7 197 aa9.57□□□□□ -0.88
NEDD8-203ENST00000524927 DUSP9Q99956 384 aaKnown RBP9.57□□□□□ -0.88
NEDD8-203ENST00000524927 IRS2Q9Y4H2 1338 aa9.56□□□□□ -0.88
NEDD8-203ENST00000524927 EIF1AYO14602 144 aaKnown RBP9.56□□□□□ -0.88
NEDD8-203ENST00000524927 TNFRSF21O75509 655 aa9.56□□□□□ -0.88
NEDD8-203ENST00000524927 EIF5P55010 431 aaKnown RBP9.56□□□□□ -0.88
NEDD8-203ENST00000524927 PCBP4P57723 403 aaKnown RBP9.56□□□□□ -0.88
NEDD8-203ENST00000524927 XKR5Q6UX68 686 aa9.56□□□□□ -0.88
NEDD8-203ENST00000524927 MAFAQ8NHW3 353 aaPredicted RBP9.56□□□□□ -0.88
NEDD8-203ENST00000524927 CD99L2Q8TCZ2 262 aa9.56□□□□□ -0.88
NEDD8-203ENST00000524927 CDCA5Q96FF9 252 aa9.56□□□□□ -0.88
NEDD8-203ENST00000524927 C1QTNF1Q9BXJ1 281 aa9.56□□□□□ -0.88
NEDD8-203ENST00000524927 ELP3Q9H9T3 547 aa9.56□□□□□ -0.88
NEDD8-203ENST00000524927 PARP2Q9UGN5 583 aa9.56□□□□□ -0.88
NEDD8-203ENST00000524927 KCNH4Q9UQ05 1017 aa9.56□□□□□ -0.88
NEDD8-203ENST00000524927 BDP1A6H8Y1 2624 aa9.56□□□□□ -0.88
NEDD8-203ENST00000524927 KDM3BQ7LBC6 1761 aa9.55□□□□□ -0.88
NEDD8-203ENST00000524927 MUC6Q6W4X9 2439 aa9.55□□□□□ -0.88
NEDD8-203ENST00000524927 PPIP5K2O43314 1243 aa9.55□□□□□ -0.88
NEDD8-203ENST00000524927 CPNE3O75131 537 aaKnown RBP9.55□□□□□ -0.88
NEDD8-203ENST00000524927 GRNP28799 593 aaKnown RBP9.55□□□□□ -0.88
NEDD8-203ENST00000524927 TDHQ8IZJ6 230 aa9.55□□□□□ -0.88
NEDD8-203ENST00000524927 SNX29Q8TEQ0 813 aa9.55□□□□□ -0.88
NEDD8-203ENST00000524927 DNAJC25Q9H1X3 360 aa9.55□□□□□ -0.88
NEDD8-203ENST00000524927 SLC12A5Q9H2X9 1139 aa9.55□□□□□ -0.88
NEDD8-203ENST00000524927 MRS2Q9HD23 443 aa9.55□□□□□ -0.88
NEDD8-203ENST00000524927 FOXD3Q9UJU5 478 aaPredicted RBP9.55□□□□□ -0.88
NEDD8-203ENST00000524927 PHACTR2O75167 634 aa9.54□□□□□ -0.88
NEDD8-203ENST00000524927 FAM157BP0CG42 384 aa9.54□□□□□ -0.88
NEDD8-203ENST00000524927 SFSWAPQ12872 951 aaKnown RBP9.54□□□□□ -0.88
NEDD8-203ENST00000524927 ARHGEF6Q15052 776 aa9.54□□□□□ -0.88
NEDD8-203ENST00000524927 SEMA6BQ9H3T3 888 aa9.54□□□□□ -0.88
NEDD8-203ENST00000524927 TMEM63CQ9P1W3 806 aa9.54□□□□□ -0.88
NEDD8-203ENST00000524927 SCN7AQ01118 1682 aa9.54□□□□□ -0.88
NEDD8-203ENST00000524927 PKD1L2Q7Z442 2459 aa9.54□□□□□ -0.88
NEDD8-203ENST00000524927 POLR2AP24928 1970 aaKnown RBP9.54□□□□□ -0.88
NEDD8-203ENST00000524927 INHBEP58166 350 aa9.53□□□□□ -0.88
NEDD8-203ENST00000524927 PSMD2Q13200 908 aa9.53□□□□□ -0.88
NEDD8-203ENST00000524927 TTC39BQ5VTQ0 682 aaPredicted RBP9.53□□□□□ -0.88
NEDD8-203ENST00000524927 DPF2Q92785 391 aa9.53□□□□□ -0.88
NEDD8-203ENST00000524927 FAM161BQ96MY7 647 aa9.53□□□□□ -0.88
NEDD8-203ENST00000524927 PLVAPQ9BX97 442 aa9.53□□□□□ -0.88
NEDD8-203ENST00000524927 C11orf16Q9NQ32 467 aa9.53□□□□□ -0.88
NEDD8-203ENST00000524927 PTCH2Q9Y6C5 1203 aa9.53□□□□□ -0.88
NEDD8-203ENST00000524927 KRTAP9-6A0A140TA67 174 aa9.52□□□□□ -0.89
NEDD8-203ENST00000524927 SHTN1A0MZ66 631 aa9.52□□□□□ -0.89
NEDD8-203ENST00000524927 EGFRP00533 1210 aa9.52□□□□□ -0.89
NEDD8-203ENST00000524927 CANXP27824 592 aaKnown RBP9.52□□□□□ -0.89
NEDD8-203ENST00000524927 SP3Q02447 781 aa9.52□□□□□ -0.89
NEDD8-203ENST00000524927 KRT25Q7Z3Z0 450 aa9.52□□□□□ -0.89
NEDD8-203ENST00000524927 NBPF5PQ86XG9 351 aaPredicted RBP9.52□□□□□ -0.89
NEDD8-203ENST00000524927 ZFYVE28Q9HCC9 887 aa9.52□□□□□ -0.89
NEDD8-203ENST00000524927 SASH3O75995 380 aa9.51□□□□□ -0.89
NEDD8-203ENST00000524927 VAMP1P23763 118 aa9.51□□□□□ -0.89
NEDD8-203ENST00000524927 ADH6P28332 368 aa9.51□□□□□ -0.89
NEDD8-203ENST00000524927 GJA8P48165 433 aa9.51□□□□□ -0.89
NEDD8-203ENST00000524927 CCINQ13939 588 aa9.51□□□□□ -0.89
NEDD8-203ENST00000524927 AOC3Q16853 763 aa9.51□□□□□ -0.89
NEDD8-203ENST00000524927 TSNAXIP1Q2TAA8 658 aa9.51□□□□□ -0.89
NEDD8-203ENST00000524927 FOXD4L6Q3SYB3 417 aaPredicted RBP9.51□□□□□ -0.89
NEDD8-203ENST00000524927 TBC1D10BQ4KMP7 808 aaPredicted RBP9.51□□□□□ -0.89
NEDD8-203ENST00000524927 FOXD4L3Q6VB84 417 aaPredicted RBP9.51□□□□□ -0.89
NEDD8-203ENST00000524927 FBF1Q8TES7 1133 aa9.51□□□□□ -0.89
NEDD8-203ENST00000524927 PNMA5Q96PV4 448 aa9.51□□□□□ -0.89
NEDD8-203ENST00000524927 RNF19AQ9NV58 838 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms