RNA–Protein interactions for RNA: ENST00000524813.2

PCDHB18P-201, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 2,368 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-201ENST00000524813 STAG1Q8WVM7 1258 aa20.54■□□□□ 0.88
PCDHB18P-201ENST00000524813 EIF3CQ99613 913 aaKnown RBP20.54■□□□□ 0.88
PCDHB18P-201ENST00000524813 RNF216Q9NWF9 866 aaPredicted RBP20.54■□□□□ 0.88
PCDHB18P-201ENST00000524813 VPS54Q9P1Q0 977 aa20.54■□□□□ 0.88
PCDHB18P-201ENST00000524813 RRAGBQ5VZM2 374 aa20.53■□□□□ 0.88
PCDHB18P-201ENST00000524813 CHP1Q99653 195 aa20.53■□□□□ 0.88
PCDHB18P-201ENST00000524813 BLZF1Q9H2G9 400 aa20.53■□□□□ 0.88
PCDHB18P-201ENST00000524813 VIPAS39Q9H9C1 493 aa20.53■□□□□ 0.88
PCDHB18P-201ENST00000524813 SYF2O95926 243 aaKnown RBP20.53■□□□□ 0.88
PCDHB18P-201ENST00000524813 TDO2P48775 406 aa20.53■□□□□ 0.88
PCDHB18P-201ENST00000524813 USP14P54578 494 aa20.53■□□□□ 0.88
PCDHB18P-201ENST00000524813 TRIM14Q14142 442 aa20.53■□□□□ 0.88
PCDHB18P-201ENST00000524813 KIF6Q6ZMV9 814 aa20.53■□□□□ 0.88
PCDHB18P-201ENST00000524813 TRAPPC11Q7Z392 1133 aa20.53■□□□□ 0.88
PCDHB18P-201ENST00000524813 FERMT2Q96AC1 680 aa20.53■□□□□ 0.88
PCDHB18P-201ENST00000524813 REXO2Q9Y3B8 237 aaKnown RBP20.53■□□□□ 0.88
PCDHB18P-201ENST00000524813 CHD4Q14839 1912 aa20.52■□□□□ 0.88
PCDHB18P-201ENST00000524813 WNT7AO00755 349 aa20.52■□□□□ 0.88
PCDHB18P-201ENST00000524813 KRT2P35908 639 aa20.52■□□□□ 0.88
PCDHB18P-201ENST00000524813 TMTC2Q8N394 836 aa20.52■□□□□ 0.88
PCDHB18P-201ENST00000524813 PLEKHA4Q9H4M7 779 aa20.52■□□□□ 0.88
PCDHB18P-201ENST00000524813 HDAC6Q9UBN7 1215 aa20.52■□□□□ 0.88
PCDHB18P-201ENST00000524813 EPN1Q9Y6I3 576 aaPredicted RBP20.52■□□□□ 0.88
PCDHB18P-201ENST00000524813 ENC1O14682 589 aa20.52■□□□□ 0.88
PCDHB18P-201ENST00000524813 AARSP49588 968 aaKnown RBP eCLIP20.52■□□□□ 0.88
PCDHB18P-201ENST00000524813 MAP3K12Q12852 859 aa20.52■□□□□ 0.88
PCDHB18P-201ENST00000524813 ZNF174Q15697 407 aa20.52■□□□□ 0.88
PCDHB18P-201ENST00000524813 AFAP1L1Q8TED9 768 aa20.52■□□□□ 0.88
PCDHB18P-201ENST00000524813 RWDD2AQ9UIY3 292 aa20.52■□□□□ 0.88
PCDHB18P-201ENST00000524813 XDHP47989 1333 aa20.51■□□□□ 0.87
PCDHB18P-201ENST00000524813 KCNJ18B7U540 433 aa20.51■□□□□ 0.87
PCDHB18P-201ENST00000524813 NDUFA10O95299 355 aa20.51■□□□□ 0.87
PCDHB18P-201ENST00000524813 GPTP24298 496 aa20.51■□□□□ 0.87
PCDHB18P-201ENST00000524813 KCNJ12Q14500 433 aa20.51■□□□□ 0.87
PCDHB18P-201ENST00000524813 TCP11X2Q5H9J9 407 aa20.51■□□□□ 0.87
PCDHB18P-201ENST00000524813 SPATA5Q8NB90 893 aa20.51■□□□□ 0.87
PCDHB18P-201ENST00000524813 ANKRD20A12PQ8NF67 263 aa20.51■□□□□ 0.87
PCDHB18P-201ENST00000524813 CTCFLQ8NI51 663 aaPredicted RBP20.51■□□□□ 0.87
PCDHB18P-201ENST00000524813 SLC4A9Q96Q91 983 aa20.51■□□□□ 0.87
PCDHB18P-201ENST00000524813 RNF26Q9BY78 433 aaPredicted RBP20.51■□□□□ 0.87
PCDHB18P-201ENST00000524813 PRDM1O75626 825 aa20.51■□□□□ 0.87
PCDHB18P-201ENST00000524813 XBP1P17861 261 aa20.51■□□□□ 0.87
PCDHB18P-201ENST00000524813 CTSWP56202 376 aa20.51■□□□□ 0.87
PCDHB18P-201ENST00000524813 SPAG1Q07617 926 aa20.51■□□□□ 0.87
PCDHB18P-201ENST00000524813 MMS19Q96T76 1030 aa20.51■□□□□ 0.87
PCDHB18P-201ENST00000524813 HPCAL4Q9UM19 191 aa20.51■□□□□ 0.87
PCDHB18P-201ENST00000524813 TIAM2Q8IVF5 1701 aa20.51■□□□□ 0.87
PCDHB18P-201ENST00000524813 CDHR2Q9BYE9 1310 aa20.5■□□□□ 0.87
PCDHB18P-201ENST00000524813 hCG_1642624A0A1W2PR95 340 aa20.5■□□□□ 0.87
PCDHB18P-201ENST00000524813 ANKRD65E5RJM6 399 aa20.5■□□□□ 0.87
PCDHB18P-201ENST00000524813 PSMD14O00487 310 aa20.5■□□□□ 0.87
PCDHB18P-201ENST00000524813 PRPF6O94906 941 aaKnown RBP20.5■□□□□ 0.87
PCDHB18P-201ENST00000524813 PAK1Q13153 545 aa20.5■□□□□ 0.87
PCDHB18P-201ENST00000524813 TTC31Q49AM3 519 aaPredicted RBP20.5■□□□□ 0.87
PCDHB18P-201ENST00000524813 CTR9Q6PD62 1173 aa20.5■□□□□ 0.87
PCDHB18P-201ENST00000524813 PACS2Q86VP3 889 aa20.5■□□□□ 0.87
PCDHB18P-201ENST00000524813 LCORLQ8N3X6 602 aa20.5■□□□□ 0.87
PCDHB18P-201ENST00000524813 HELBQ8NG08 1087 aaPredicted RBP20.5■□□□□ 0.87
PCDHB18P-201ENST00000524813 PHF20Q9BVI0 1012 aa20.5■□□□□ 0.87
PCDHB18P-201ENST00000524813 NACAP1Q9BZK3 213 aa20.5■□□□□ 0.87
PCDHB18P-201ENST00000524813 SLC4A4Q9Y6R1 1079 aa20.5■□□□□ 0.87
PCDHB18P-201ENST00000524813 AFF2P51816 1311 aa20.5■□□□□ 0.87
PCDHB18P-201ENST00000524813 RCAN1P53805 252 aa20.5■□□□□ 0.87
PCDHB18P-201ENST00000524813 CORO7P57737 925 aa20.5■□□□□ 0.87
PCDHB18P-201ENST00000524813 UBXN1Q04323 297 aa20.5■□□□□ 0.87
PCDHB18P-201ENST00000524813 PKN1Q16512 942 aa20.5■□□□□ 0.87
PCDHB18P-201ENST00000524813 NELFBQ8WX92 580 aa20.5■□□□□ 0.87
PCDHB18P-201ENST00000524813 UBAC1Q9BSL1 405 aa20.5■□□□□ 0.87
PCDHB18P-201ENST00000524813 SRGAP2O75044 1071 aa20.49■□□□□ 0.87
PCDHB18P-201ENST00000524813 PPFIA4O75335 1185 aa20.49■□□□□ 0.87
PCDHB18P-201ENST00000524813 ATP1A1P05023 1023 aaKnown RBP20.49■□□□□ 0.87
PCDHB18P-201ENST00000524813 MAP9Q49MG5 647 aa20.49■□□□□ 0.87
PCDHB18P-201ENST00000524813 BMP15O95972 392 aa20.49■□□□□ 0.87
PCDHB18P-201ENST00000524813 MCM3P25205 808 aa20.49■□□□□ 0.87
PCDHB18P-201ENST00000524813 HAUS4Q9H6D7 363 aa20.49■□□□□ 0.87
PCDHB18P-201ENST00000524813 SAR1BQ9Y6B6 198 aa20.49■□□□□ 0.87
PCDHB18P-201ENST00000524813 KCNQ2O43526 872 aa20.48■□□□□ 0.87
PCDHB18P-201ENST00000524813 PUM3Q15397 648 aaKnown RBP20.48■□□□□ 0.87
PCDHB18P-201ENST00000524813 E2F4Q16254 413 aa20.48■□□□□ 0.87
PCDHB18P-201ENST00000524813 LPIN2Q92539 896 aa20.48■□□□□ 0.87
PCDHB18P-201ENST00000524813 MTA3Q9BTC8 594 aa20.48■□□□□ 0.87
PCDHB18P-201ENST00000524813 TFR2Q9UP52 801 aa20.48■□□□□ 0.87
PCDHB18P-201ENST00000524813 TTC26A0AVF1 554 aa20.48■□□□□ 0.87
PCDHB18P-201ENST00000524813 PTGDRQ13258 359 aa20.48■□□□□ 0.87
PCDHB18P-201ENST00000524813 RASGRF1Q13972 1273 aa20.48■□□□□ 0.87
PCDHB18P-201ENST00000524813 HLFQ16534 295 aa20.48■□□□□ 0.87
PCDHB18P-201ENST00000524813 NLRP10Q86W26 655 aa20.48■□□□□ 0.87
PCDHB18P-201ENST00000524813 RIN2Q8WYP3 895 aaPredicted RBP20.48■□□□□ 0.87
PCDHB18P-201ENST00000524813 CAPZA3Q96KX2 299 aa20.48■□□□□ 0.87
PCDHB18P-201ENST00000524813 GDAP1L1Q96MZ0 367 aa20.48■□□□□ 0.87
PCDHB18P-201ENST00000524813 STARD3NLO95772 234 aa20.47■□□□□ 0.87
PCDHB18P-201ENST00000524813 STIM1Q13586 685 aa20.47■□□□□ 0.87
PCDHB18P-201ENST00000524813 TTC38Q5R3I4 469 aa20.47■□□□□ 0.87
PCDHB18P-201ENST00000524813 OR8K1Q8NGG5 319 aa20.47■□□□□ 0.87
PCDHB18P-201ENST00000524813 COG1Q8WTW3 980 aa20.47■□□□□ 0.87
PCDHB18P-201ENST00000524813 MTRQ99707 1265 aa20.47■□□□□ 0.87
PCDHB18P-201ENST00000524813 MAPK8IP1Q9UQF2 711 aa20.47■□□□□ 0.87
PCDHB18P-201ENST00000524813 ZC3H4Q9UPT8 1303 aaKnown RBP20.47■□□□□ 0.87
PCDHB18P-201ENST00000524813 THSD7AQ9UPZ6 1657 aa20.46■□□□□ 0.87
PCDHB18P-201ENST00000524813 IRS4O14654 1257 aaPredicted RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms