RNA–Protein interactions for RNA: ENST00000524442.1

TTC39A-213, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 3

Gene TTC39A, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-213ENST00000524442 B4E1Z4 1266 aa11.91□□□□□ -0.5
TTC39A-213ENST00000524442 NMT2O60551 498 aa11.91□□□□□ -0.5
TTC39A-213ENST00000524442 PLA2G6O60733 806 aa11.91□□□□□ -0.5
TTC39A-213ENST00000524442 CNMDO75829 334 aa11.91□□□□□ -0.5
TTC39A-213ENST00000524442 FDX1P10109 184 aa11.91□□□□□ -0.5
TTC39A-213ENST00000524442 BMP3P12645 472 aa11.91□□□□□ -0.5
TTC39A-213ENST00000524442 CTGFP29279 349 aa11.91□□□□□ -0.5
TTC39A-213ENST00000524442 SLC1A4P43007 532 aa11.91□□□□□ -0.5
TTC39A-213ENST00000524442 RNF20Q5VTR2 975 aa11.91□□□□□ -0.5
TTC39A-213ENST00000524442 RCSD1Q6JBY9 416 aa11.91□□□□□ -0.5
TTC39A-213ENST00000524442 POTEEQ6S8J3 1075 aa11.91□□□□□ -0.5
TTC39A-213ENST00000524442 PRPF38AQ8NAV1 312 aaKnown RBP11.91□□□□□ -0.5
TTC39A-213ENST00000524442 NCOA7Q8NI08 942 aa11.91□□□□□ -0.5
TTC39A-213ENST00000524442 ZSCAN10Q96SZ4 725 aaPredicted RBP11.91□□□□□ -0.5
TTC39A-213ENST00000524442 SLF1Q9BQI6 1058 aa11.91□□□□□ -0.5
TTC39A-213ENST00000524442 ZSWIM5Q9P217 1185 aa11.91□□□□□ -0.5
TTC39A-213ENST00000524442 E7EWF7 191 aa11.9□□□□□ -0.5
TTC39A-213ENST00000524442 EPB41L2O43491 1005 aaKnown RBP11.9□□□□□ -0.5
TTC39A-213ENST00000524442 IRF5Q13568 498 aa11.9□□□□□ -0.5
TTC39A-213ENST00000524442 NECTIN1Q15223 517 aa11.9□□□□□ -0.5
TTC39A-213ENST00000524442 Q3C1V9 767 aa11.9□□□□□ -0.5
TTC39A-213ENST00000524442 RALYLQ86SE5 291 aaKnown RBP11.9□□□□□ -0.5
TTC39A-213ENST00000524442 FAM160B2Q86V87 743 aa11.9□□□□□ -0.5
TTC39A-213ENST00000524442 SHCBP1Q8NEM2 672 aa11.9□□□□□ -0.5
TTC39A-213ENST00000524442 CHURC1Q8WUH1 139 aa11.9□□□□□ -0.5
TTC39A-213ENST00000524442 DCAF4Q8WV16 495 aa11.9□□□□□ -0.5
TTC39A-213ENST00000524442 ATG4CQ96DT6 458 aa11.9□□□□□ -0.5
TTC39A-213ENST00000524442 TMEM47Q9BQJ4 181 aa11.9□□□□□ -0.5
TTC39A-213ENST00000524442 UBAC1Q9BSL1 405 aa11.9□□□□□ -0.5
TTC39A-213ENST00000524442 MTA3Q9BTC8 594 aa11.9□□□□□ -0.5
TTC39A-213ENST00000524442 BTBD7Q9P203 1132 aa11.9□□□□□ -0.5
TTC39A-213ENST00000524442 HPS5Q9UPZ3 1129 aa11.9□□□□□ -0.5
TTC39A-213ENST00000524442 VWA5AO00534 786 aa11.89□□□□□ -0.51
TTC39A-213ENST00000524442 ATP2A1O14983 1001 aa11.89□□□□□ -0.51
TTC39A-213ENST00000524442 REC8O95072 547 aa11.89□□□□□ -0.51
TTC39A-213ENST00000524442 SLC25A27O95847 323 aa11.89□□□□□ -0.51
TTC39A-213ENST00000524442 MCCP23508 829 aa11.89□□□□□ -0.51
TTC39A-213ENST00000524442 COPB2P35606 906 aa11.89□□□□□ -0.51
TTC39A-213ENST00000524442 STAT2P52630 851 aa11.89□□□□□ -0.51
TTC39A-213ENST00000524442 PRKCZQ05513 592 aa11.89□□□□□ -0.51
TTC39A-213ENST00000524442 PLEKHH3Q7Z736 793 aa11.89□□□□□ -0.51
TTC39A-213ENST00000524442 NBPF11Q86T75 865 aa11.89□□□□□ -0.51
TTC39A-213ENST00000524442 RAET1EQ8TD07 263 aa11.89□□□□□ -0.51
TTC39A-213ENST00000524442 SOCS4Q8WXH5 440 aa11.89□□□□□ -0.51
TTC39A-213ENST00000524442 NUP88Q99567 741 aaPredicted RBP11.89□□□□□ -0.51
TTC39A-213ENST00000524442 SPATC1LQ9H0A9 340 aa11.89□□□□□ -0.51
TTC39A-213ENST00000524442 FBXO28Q9NVF7 368 aa11.89□□□□□ -0.51
TTC39A-213ENST00000524442 PTCH2Q9Y6C5 1203 aa11.89□□□□□ -0.51
TTC39A-213ENST00000524442 TNKSO95271 1327 aa11.88□□□□□ -0.51
TTC39A-213ENST00000524442 ERICH2A1L162 156 aa11.88□□□□□ -0.51
TTC39A-213ENST00000524442 TMEM232C9JQI7 657 aa11.88□□□□□ -0.51
TTC39A-213ENST00000524442 SLC27A2O14975 620 aa11.88□□□□□ -0.51
TTC39A-213ENST00000524442 STRNO43815 780 aa11.88□□□□□ -0.51
TTC39A-213ENST00000524442 ZBED4O75132 1171 aa11.88□□□□□ -0.51
TTC39A-213ENST00000524442 SNHG28P0DPA3 235 aa11.88□□□□□ -0.51
TTC39A-213ENST00000524442 FLT3LGP49771 235 aa11.88□□□□□ -0.51
TTC39A-213ENST00000524442 OAZ1P54368 228 aa11.88□□□□□ -0.51
TTC39A-213ENST00000524442 SART3Q15020 963 aaKnown RBP11.88□□□□□ -0.51
TTC39A-213ENST00000524442 SLC9C1Q4G0N8 1177 aa11.88□□□□□ -0.51
TTC39A-213ENST00000524442 CREB3L3Q68CJ9 461 aa11.88□□□□□ -0.51
TTC39A-213ENST00000524442 GPR142Q7Z601 462 aa11.88□□□□□ -0.51
TTC39A-213ENST00000524442 ENAHQ8N8S7 591 aaPredicted RBP11.88□□□□□ -0.51
TTC39A-213ENST00000524442 SLAIN1Q8ND83 568 aa11.88□□□□□ -0.51
TTC39A-213ENST00000524442 NKX2-3Q8TAU0 364 aa11.88□□□□□ -0.51
TTC39A-213ENST00000524442 PXYLP1Q8TE99 480 aa11.88□□□□□ -0.51
TTC39A-213ENST00000524442 ARMC5Q96C12 935 aa11.88□□□□□ -0.51
TTC39A-213ENST00000524442 NUDT12Q9BQG2 462 aa11.88□□□□□ -0.51
TTC39A-213ENST00000524442 ZKSCAN3Q9BRR0 538 aa11.88□□□□□ -0.51
TTC39A-213ENST00000524442 MOV10L1Q9BXT6 1211 aaKnown RBP11.88□□□□□ -0.51
TTC39A-213ENST00000524442 PORCNQ9H237 461 aa11.88□□□□□ -0.51
TTC39A-213ENST00000524442 MROH8Q9H579 483 aa11.88□□□□□ -0.51
TTC39A-213ENST00000524442 KAT14Q9H8E8 782 aa11.88□□□□□ -0.51
TTC39A-213ENST00000524442 CWC22Q9HCG8 908 aaKnown RBP11.88□□□□□ -0.51
TTC39A-213ENST00000524442 GJD2Q9UKL4 321 aa11.88□□□□□ -0.51
TTC39A-213ENST00000524442 CTDP1Q9Y5B0 961 aaPredicted RBP11.88□□□□□ -0.51
TTC39A-213ENST00000524442 IVNS1ABPQ9Y6Y0 642 aa11.88□□□□□ -0.51
TTC39A-213ENST00000524442 MYH4Q9Y623 1939 aa11.88□□□□□ -0.51
TTC39A-213ENST00000524442 SLC15A5A6NIM6 579 aa11.87□□□□□ -0.51
TTC39A-213ENST00000524442 PEX10O60683 326 aa11.87□□□□□ -0.51
TTC39A-213ENST00000524442 EIF5BO60841 1220 aaKnown RBP11.87□□□□□ -0.51
TTC39A-213ENST00000524442 ECM2O94769 699 aaPredicted RBP11.87□□□□□ -0.51
TTC39A-213ENST00000524442 PDHBP11177 359 aa11.87□□□□□ -0.51
TTC39A-213ENST00000524442 XRCC5P13010 732 aaKnown RBP11.87□□□□□ -0.51
TTC39A-213ENST00000524442 ZKSCAN1P17029 563 aaPredicted RBP11.87□□□□□ -0.51
TTC39A-213ENST00000524442 GRK4P32298 578 aa11.87□□□□□ -0.51
TTC39A-213ENST00000524442 STAT3P40763 770 aa11.87□□□□□ -0.51
TTC39A-213ENST00000524442 TMEM132BQ14DG7 1078 aa11.87□□□□□ -0.51
TTC39A-213ENST00000524442 TSGA10IPQ3SY00 556 aa11.87□□□□□ -0.51
TTC39A-213ENST00000524442 GPATCH4Q5T3I0 446 aaKnown RBP11.87□□□□□ -0.51
TTC39A-213ENST00000524442 IFIT1BQ5T764 474 aaKnown RBP11.87□□□□□ -0.51
TTC39A-213ENST00000524442 SAMD1Q6SPF0 538 aaPredicted RBP11.87□□□□□ -0.51
TTC39A-213ENST00000524442 BTNL9Q6UXG8 535 aa11.87□□□□□ -0.51
TTC39A-213ENST00000524442 STOX1Q6ZVD7 989 aa11.87□□□□□ -0.51
TTC39A-213ENST00000524442 RIOX2Q8IUF8 465 aa11.87□□□□□ -0.51
TTC39A-213ENST00000524442 TRMT44Q8IYL2 757 aaKnown RBP11.87□□□□□ -0.51
TTC39A-213ENST00000524442 PNMA1Q8ND90 353 aa11.87□□□□□ -0.51
TTC39A-213ENST00000524442 REPS2Q8NFH8 660 aa11.87□□□□□ -0.51
TTC39A-213ENST00000524442 KIFC2Q96AC6 838 aa11.87□□□□□ -0.51
TTC39A-213ENST00000524442 TEX13BQ9BXU2 312 aa11.87□□□□□ -0.51
TTC39A-213ENST00000524442 SLC38A10Q9HBR0 1119 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms