RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	KCNC1	P48547	511 aa		7.01	□□□□□ -1.29
PCM1-223	ENST00000524356	ADAM17	P78536	824 aa		7.01	□□□□□ -1.29
PCM1-223	ENST00000524356	SORCS2	Q96PQ0	1159 aa		7.01	□□□□□ -1.29
PCM1-223	ENST00000524356	PPP1R15A	O75807	674 aa	Predicted RBP	7	□□□□□ -1.29
PCM1-223	ENST00000524356	ERVFRD-1	P60508	538 aa		7	□□□□□ -1.29
PCM1-223	ENST00000524356	SEPT6	Q14141	434 aa		7	□□□□□ -1.29
PCM1-223	ENST00000524356	DSC3	Q14574	896 aa		7	□□□□□ -1.29
PCM1-223	ENST00000524356	PLCD4	Q9BRC7	762 aa		7	□□□□□ -1.29
PCM1-223	ENST00000524356	KLHL14	Q9P2G3	628 aa		7	□□□□□ -1.29
PCM1-223	ENST00000524356	PCDHA5	Q9Y5H7	936 aa		7	□□□□□ -1.29
PCM1-223	ENST00000524356	LOC105371045	A0A1W2PR82	267 aa		6.99	□□□□□ -1.29
PCM1-223	ENST00000524356	PNLIP	P16233	465 aa		6.99	□□□□□ -1.29
PCM1-223	ENST00000524356	UBXN11	Q5T124	520 aa		6.99	□□□□□ -1.29
PCM1-223	ENST00000524356	OLFML2B	Q68BL8	750 aa		6.99	□□□□□ -1.29
PCM1-223	ENST00000524356	TTBK2	Q6IQ55	1244 aa		6.99	□□□□□ -1.29
PCM1-223	ENST00000524356	FERMT3	Q86UX7	667 aa		6.99	□□□□□ -1.29
PCM1-223	ENST00000524356	CYB5D2	Q8WUJ1	264 aa		6.99	□□□□□ -1.29
PCM1-223	ENST00000524356	RNF141	Q8WVD5	230 aa		6.99	□□□□□ -1.29
PCM1-223	ENST00000524356	MAP6	Q96JE9	813 aa		6.99	□□□□□ -1.29
PCM1-223	ENST00000524356	PCDHB5	Q9Y5E4	795 aa		6.99	□□□□□ -1.29
PCM1-223	ENST00000524356	ABLIM1	O14639	778 aa		6.98	□□□□□ -1.29
PCM1-223	ENST00000524356	NCKAP1L	P55160	1127 aa		6.98	□□□□□ -1.29
PCM1-223	ENST00000524356	CEP128	Q6ZU80	1094 aa		6.98	□□□□□ -1.29
PCM1-223	ENST00000524356	TMC6	Q7Z403	805 aa		6.98	□□□□□ -1.29
PCM1-223	ENST00000524356	BUB1B	O60566	1050 aa	Predicted RBP	6.97	□□□□□ -1.29
PCM1-223	ENST00000524356	RPL10	P27635	214 aa	Known RBP	6.97	□□□□□ -1.29
PCM1-223	ENST00000524356	KIR2DL1	P43626	348 aa	Predicted RBP	6.97	□□□□□ -1.29
PCM1-223	ENST00000524356	KIR2DL2	P43627	348 aa	Predicted RBP	6.97	□□□□□ -1.29
PCM1-223	ENST00000524356	SLC14A2	Q15849	920 aa		6.97	□□□□□ -1.29
PCM1-223	ENST00000524356	CCDC82	Q8N4S0	544 aa		6.97	□□□□□ -1.29
PCM1-223	ENST00000524356	HHIPL1	Q96JK4	782 aa		6.97	□□□□□ -1.29
PCM1-223	ENST00000524356	KRTAP3-1	Q9BYR8	98 aa		6.97	□□□□□ -1.29
PCM1-223	ENST00000524356	SCAND2P	Q9GZW5	306 aa	Predicted RBP	6.97	□□□□□ -1.29
PCM1-223	ENST00000524356	CAP1	Q01518	475 aa		6.96	□□□□□ -1.3
PCM1-223	ENST00000524356	KIR3DS1	Q14943	382 aa		6.96	□□□□□ -1.3
PCM1-223	ENST00000524356	WAPL	Q7Z5K2	1190 aa		6.96	□□□□□ -1.3
PCM1-223	ENST00000524356	MENT	Q9BUN1	341 aa		6.96	□□□□□ -1.3
PCM1-223	ENST00000524356	ADAM30	Q9UKF2	790 aa		6.96	□□□□□ -1.3
PCM1-223	ENST00000524356	UPK3BL1	B0FP48	263 aa		6.95	□□□□□ -1.3
PCM1-223	ENST00000524356	UPK3BL2	E5RIL1	263 aa		6.95	□□□□□ -1.3
PCM1-223	ENST00000524356	RNF111	Q6ZNA4	994 aa		6.95	□□□□□ -1.3
PCM1-223	ENST00000524356	SV2B	Q7L1I2	683 aa		6.95	□□□□□ -1.3
PCM1-223	ENST00000524356	ADGRG2	Q8IZP9	1017 aa		6.95	□□□□□ -1.3
PCM1-223	ENST00000524356	SETDB2	Q96T68	719 aa		6.95	□□□□□ -1.3
PCM1-223	ENST00000524356	SMPD4	Q9NXE4	827 aa		6.95	□□□□□ -1.3
PCM1-223	ENST00000524356	ZMYM5	Q9UJ78	669 aa		6.95	□□□□□ -1.3
PCM1-223	ENST00000524356	TMEM82	A0PJX8	343 aa		6.94	□□□□□ -1.3
PCM1-223	ENST00000524356	IGFBP6	P24592	240 aa	Predicted RBP	6.94	□□□□□ -1.3
PCM1-223	ENST00000524356	LIMS1	P48059	325 aa		6.94	□□□□□ -1.3
PCM1-223	ENST00000524356	HMGA2	P52926	109 aa		6.94	□□□□□ -1.3
PCM1-223	ENST00000524356	VWA3B	Q502W6	1294 aa		6.94	□□□□□ -1.3
PCM1-223	ENST00000524356	NT5DC1	Q5TFE4	455 aa		6.94	□□□□□ -1.3
PCM1-223	ENST00000524356	B4GALNT3	Q6L9W6	998 aa		6.94	□□□□□ -1.3
PCM1-223	ENST00000524356	USHBP1	Q8N6Y0	703 aa		6.94	□□□□□ -1.3
PCM1-223	ENST00000524356		A0A1B0GTL3	188 aa		6.93	□□□□□ -1.3
PCM1-223	ENST00000524356	TREH	O43280	583 aa		6.93	□□□□□ -1.3
PCM1-223	ENST00000524356	MPO	P05164	745 aa		6.93	□□□□□ -1.3
PCM1-223	ENST00000524356	PDE4B	Q07343	736 aa		6.93	□□□□□ -1.3
PCM1-223	ENST00000524356	DUSP10	Q9Y6W6	482 aa		6.93	□□□□□ -1.3
PCM1-223	ENST00000524356	EIF4G1	Q04637	1599 aa	Known RBP	6.93	□□□□□ -1.3
PCM1-223	ENST00000524356	C1QTNF3-AMACR	E9PGA6	284 aa		6.92	□□□□□ -1.3
PCM1-223	ENST00000524356	IGSF3	O75054	1194 aa		6.92	□□□□□ -1.3
PCM1-223	ENST00000524356	USP17L7	P0C7H9	530 aa		6.92	□□□□□ -1.3
PCM1-223	ENST00000524356	RPS26	P62854	115 aa	Known RBP	6.92	□□□□□ -1.3
PCM1-223	ENST00000524356	CLEC16A	Q2KHT3	1053 aa		6.92	□□□□□ -1.3
PCM1-223	ENST00000524356	ZPBP2	Q6X784	338 aa		6.92	□□□□□ -1.3
PCM1-223	ENST00000524356	TXNDC2	Q86VQ3	553 aa		6.92	□□□□□ -1.3
PCM1-223	ENST00000524356	FBF1	Q8TES7	1133 aa		6.92	□□□□□ -1.3
PCM1-223	ENST00000524356	KREMEN1	Q96MU8	473 aa		6.92	□□□□□ -1.3
PCM1-223	ENST00000524356	SPATA25	Q9BR10	227 aa		6.92	□□□□□ -1.3
PCM1-223	ENST00000524356	FOXP3	Q9BZS1	431 aa		6.92	□□□□□ -1.3
PCM1-223	ENST00000524356	USP40	Q9NVE5	1235 aa		6.92	□□□□□ -1.3
PCM1-223	ENST00000524356	SLPI	P03973	132 aa		6.91	□□□□□ -1.3
PCM1-223	ENST00000524356	ITGB3	P05106	788 aa		6.91	□□□□□ -1.3
PCM1-223	ENST00000524356	RTP1	P59025	263 aa		6.91	□□□□□ -1.3
PCM1-223	ENST00000524356	RAB3GAP1	Q15042	981 aa		6.91	□□□□□ -1.3
PCM1-223	ENST00000524356	LIPI	Q6XZB0	460 aa		6.91	□□□□□ -1.3
PCM1-223	ENST00000524356	FAM13C	Q8NE31	585 aa		6.91	□□□□□ -1.3
PCM1-223	ENST00000524356	ASPN	Q9BXN1	380 aa		6.91	□□□□□ -1.3
PCM1-223	ENST00000524356	HDAC8	Q9BY41	377 aa		6.91	□□□□□ -1.3
PCM1-223	ENST00000524356	CORIN	Q9Y5Q5	1042 aa		6.91	□□□□□ -1.3
PCM1-223	ENST00000524356	IRS2	Q9Y4H2	1338 aa		6.91	□□□□□ -1.3
PCM1-223	ENST00000524356	NUDT19	A8MXV4	375 aa		6.9	□□□□□ -1.3
PCM1-223	ENST00000524356	GIPC1	O14908	333 aa		6.9	□□□□□ -1.3
PCM1-223	ENST00000524356	LSR	Q86X29	649 aa	Predicted RBP	6.9	□□□□□ -1.3
PCM1-223	ENST00000524356	RBM15	Q96T37	977 aa	Known RBP eCLIP	6.9	□□□□□ -1.3	6e-8	■□□□□ 10.3
PCM1-223	ENST00000524356	PLA2G1B	P04054	148 aa	Known RBP	6.89	□□□□□ -1.31
PCM1-223	ENST00000524356	CPZ	Q66K79	652 aa		6.89	□□□□□ -1.31
PCM1-223	ENST00000524356	RGS22	Q8NE09	1264 aa		6.89	□□□□□ -1.31
PCM1-223	ENST00000524356	SYTL5	Q8TDW5	730 aa	Predicted RBP	6.89	□□□□□ -1.31
PCM1-223	ENST00000524356	TRAIP	Q9BWF2	469 aa		6.89	□□□□□ -1.31
PCM1-223	ENST00000524356	C12orf49	Q9H741	205 aa		6.89	□□□□□ -1.31
PCM1-223	ENST00000524356	FAM8A1	Q9UBU6	413 aa		6.89	□□□□□ -1.31
PCM1-223	ENST00000524356	TTF2	Q9UNY4	1162 aa	Known RBP	6.89	□□□□□ -1.31
PCM1-223	ENST00000524356	MYO15B	Q96JP2	1530 aa		6.88	□□□□□ -1.31
PCM1-223	ENST00000524356	C6	P13671	934 aa		6.88	□□□□□ -1.31
PCM1-223	ENST00000524356	ZNF20	P17024	532 aa		6.88	□□□□□ -1.31
PCM1-223	ENST00000524356	CNR2	P34972	360 aa		6.88	□□□□□ -1.31
PCM1-223	ENST00000524356	NMI	Q13287	307 aa	Predicted RBP	6.88	□□□□□ -1.31
PCM1-223	ENST00000524356	CBX2	Q14781	532 aa	Predicted RBP	6.88	□□□□□ -1.31

Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms