RNA–Protein interactions for RNA: ENST00000524226.5

PCM1-222, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 5,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-222ENST00000524226 PPP2R3CQ969Q6 453 aa2.9□□□□□ -1.94
PCM1-222ENST00000524226 CALML4Q96GE6 196 aa2.9□□□□□ -1.94
PCM1-222ENST00000524226 RSRC1Q96IZ7 334 aaKnown RBP2.9□□□□□ -1.94
PCM1-222ENST00000524226 RAB3IPQ96QF0 476 aaPredicted RBP2.9□□□□□ -1.94
PCM1-222ENST00000524226 GDPD2Q9HCC8 539 aa2.9□□□□□ -1.94
PCM1-222ENST00000524226 ARPP21Q9UBL0 812 aaPredicted RBP2.9□□□□□ -1.94
PCM1-222ENST00000524226 LUC7L2Q9Y383 392 aaKnown RBP2.9□□□□□ -1.94
PCM1-222ENST00000524226 BCORQ6W2J9 1755 aa2.9□□□□□ -1.94
PCM1-222ENST00000524226 NUP98P52948 1817 aa2.9□□□□□ -1.95
PCM1-222ENST00000524226 LAMB2P55268 1798 aa2.9□□□□□ -1.95
PCM1-222ENST00000524226 ZNF157P51786 506 aaPredicted RBP2.9□□□□□ -1.95
PCM1-222ENST00000524226 TUBB2AQ13885 445 aa2.9□□□□□ -1.95
PCM1-222ENST00000524226 SCARF1Q14162 830 aa2.9□□□□□ -1.95
PCM1-222ENST00000524226 EZH2Q15910 746 aaKnown RBP2.9□□□□□ -1.95
PCM1-222ENST00000524226 TDRD12Q587J7 1177 aaKnown RBP2.9□□□□□ -1.95
PCM1-222ENST00000524226 SLC10A5Q5PT55 438 aa2.9□□□□□ -1.95
PCM1-222ENST00000524226 AKNAD1Q5T1N1 836 aa2.9□□□□□ -1.95
PCM1-222ENST00000524226 CCDC117Q8IWD4 279 aaPredicted RBP2.9□□□□□ -1.95
PCM1-222ENST00000524226 VGLL2Q8N8G2 317 aa2.9□□□□□ -1.95
PCM1-222ENST00000524226 RETREG2Q8NC44 543 aa2.9□□□□□ -1.95
PCM1-222ENST00000524226 CTNNBL1Q8WYA6 563 aaPredicted RBP2.9□□□□□ -1.95
PCM1-222ENST00000524226 TBC1D5Q92609 795 aa2.9□□□□□ -1.95
PCM1-222ENST00000524226 IFT74Q96LB3 600 aa2.9□□□□□ -1.95
PCM1-222ENST00000524226 NUP88Q99567 741 aaPredicted RBP2.9□□□□□ -1.95
PCM1-222ENST00000524226 TUBB2BQ9BVA1 445 aa2.9□□□□□ -1.95
PCM1-222ENST00000524226 CCDC94Q9BW85 323 aaPredicted RBP2.9□□□□□ -1.95
PCM1-222ENST00000524226 TCP11L1Q9NUJ3 509 aa2.9□□□□□ -1.95
PCM1-222ENST00000524226 CPSF2Q9P2I0 782 aaKnown RBP2.9□□□□□ -1.95
PCM1-222ENST00000524226 SCN7AQ01118 1682 aa2.9□□□□□ -1.95
PCM1-222ENST00000524226 PNPLA7Q6ZV29 1317 aa2.9□□□□□ -1.95
PCM1-222ENST00000524226 A0A1W2PRG0 241 aa2.9□□□□□ -1.95
PCM1-222ENST00000524226 NR1I2O75469 434 aa2.9□□□□□ -1.95
PCM1-222ENST00000524226 PCP11498 1178 aaKnown RBP2.9□□□□□ -1.95
PCM1-222ENST00000524226 TNNT1P13805 278 aa2.9□□□□□ -1.95
PCM1-222ENST00000524226 GTF2A1P52655 376 aaPredicted RBP2.9□□□□□ -1.95
PCM1-222ENST00000524226 GUCY1B3Q02153 619 aa2.9□□□□□ -1.95
PCM1-222ENST00000524226 SH2D4BQ5SQS7 431 aa2.9□□□□□ -1.95
PCM1-222ENST00000524226 MAATS1Q7Z4T9 603 aa2.9□□□□□ -1.95
PCM1-222ENST00000524226 BRAPQ7Z569 592 aa2.9□□□□□ -1.95
PCM1-222ENST00000524226 RAB11FIP4Q86YS3 637 aa2.9□□□□□ -1.95
PCM1-222ENST00000524226 HOMEZQ8IX15 550 aa2.9□□□□□ -1.95
PCM1-222ENST00000524226 CCDC144CPQ8IYA2 1237 aa2.9□□□□□ -1.95
PCM1-222ENST00000524226 LCORLQ8N3X6 602 aa2.9□□□□□ -1.95
PCM1-222ENST00000524226 SLC26A6Q9BXS9 759 aa2.9□□□□□ -1.95
PCM1-222ENST00000524226 KAT14Q9H8E8 782 aa2.9□□□□□ -1.95
PCM1-222ENST00000524226 PNMA3Q9UL41 463 aa2.9□□□□□ -1.95
PCM1-222ENST00000524226 MTMR6Q9Y217 621 aa2.9□□□□□ -1.95
PCM1-222ENST00000524226 THSD7AQ9UPZ6 1657 aa2.9□□□□□ -1.95
PCM1-222ENST00000524226 DDX60Q8IY21 1712 aaKnown RBP2.9□□□□□ -1.95
PCM1-222ENST00000524226 CCDC194A0A1B0GVG4 234 aa2.9□□□□□ -1.95
PCM1-222ENST00000524226 TSPY2A6NKD2 308 aa2.9□□□□□ -1.95
PCM1-222ENST00000524226 ZBED4O75132 1171 aa2.9□□□□□ -1.95
PCM1-222ENST00000524226 STMN1P16949 149 aa2.9□□□□□ -1.95
PCM1-222ENST00000524226 PDIA3P30101 505 aaKnown RBP2.9□□□□□ -1.95
PCM1-222ENST00000524226 SNW1Q13573 536 aaKnown RBP2.9□□□□□ -1.95
PCM1-222ENST00000524226 SETDB1Q15047 1291 aa2.9□□□□□ -1.95
PCM1-222ENST00000524226 ALX1Q15699 326 aa2.9□□□□□ -1.95
PCM1-222ENST00000524226 CLUL1Q15846 466 aa2.9□□□□□ -1.95
PCM1-222ENST00000524226 SLFNL1Q499Z3 407 aa2.9□□□□□ -1.95
PCM1-222ENST00000524226 ERMNQ8TAM6 284 aa2.9□□□□□ -1.95
PCM1-222ENST00000524226 CELF1Q92879 486 aaKnown RBP2.9□□□□□ -1.95
PCM1-222ENST00000524226 NCAPGQ9BPX3 1015 aa2.9□□□□□ -1.95
PCM1-222ENST00000524226 ALG1Q9BT22 464 aa2.9□□□□□ -1.95
PCM1-222ENST00000524226 RRAGCQ9HB90 399 aa2.9□□□□□ -1.95
PCM1-222ENST00000524226 ZFYVE28Q9HCC9 887 aa2.9□□□□□ -1.95
PCM1-222ENST00000524226 ARHGEF10LQ9HCE6 1279 aa2.9□□□□□ -1.95
PCM1-222ENST00000524226 ARFGAP3Q9NP61 516 aa2.9□□□□□ -1.95
PCM1-222ENST00000524226 AATFQ9NY61 560 aaKnown RBP eCLIP2.9□□□□□ -1.95
PCM1-222ENST00000524226 CICQ96RK0 1608 aaPredicted RBP2.89□□□□□ -1.95
PCM1-222ENST00000524226 RREB1Q92766 1687 aa2.89□□□□□ -1.95
PCM1-222ENST00000524226 BTAF1O14981 1849 aa2.89□□□□□ -1.95
PCM1-222ENST00000524226 CTAGE15A4D2H0 777 aa2.89□□□□□ -1.95
PCM1-222ENST00000524226 SH2B2O14492 632 aaPredicted RBP2.89□□□□□ -1.95
PCM1-222ENST00000524226 JAK2O60674 1132 aa2.89□□□□□ -1.95
PCM1-222ENST00000524226 BBOX1O75936 387 aa2.89□□□□□ -1.95
PCM1-222ENST00000524226 TFRCP02786 760 aaKnown RBP2.89□□□□□ -1.95
PCM1-222ENST00000524226 CTAGE8P0CG41 777 aa2.89□□□□□ -1.95
PCM1-222ENST00000524226 PPP1R2P41236 205 aa2.89□□□□□ -1.95
PCM1-222ENST00000524226 MTIF2P46199 727 aaKnown RBP2.89□□□□□ -1.95
PCM1-222ENST00000524226 LACTBP83111 547 aaPredicted RBP2.89□□□□□ -1.95
PCM1-222ENST00000524226 MKRN3Q13064 507 aaKnown RBP2.89□□□□□ -1.95
PCM1-222ENST00000524226 PPP2R5BQ15173 497 aa2.89□□□□□ -1.95
PCM1-222ENST00000524226 KMT5BQ4FZB7 885 aa2.89□□□□□ -1.95
PCM1-222ENST00000524226 FAM47CQ5HY64 1035 aa2.89□□□□□ -1.95
PCM1-222ENST00000524226 CCDC121Q6ZUS5 278 aa2.89□□□□□ -1.95
PCM1-222ENST00000524226 CTAGE6Q86UF2 777 aa2.89□□□□□ -1.95
PCM1-222ENST00000524226 CTAGE4Q8IX94 777 aa2.89□□□□□ -1.95
PCM1-222ENST00000524226 MB21D2Q8IYB1 491 aaPredicted RBP2.89□□□□□ -1.95
PCM1-222ENST00000524226 CACNA2D3Q8IZS8 1091 aa2.89□□□□□ -1.95
PCM1-222ENST00000524226 MICALL1Q8N3F8 863 aa2.89□□□□□ -1.95
PCM1-222ENST00000524226 TBC1D22AQ8WUA7 517 aa2.89□□□□□ -1.95
PCM1-222ENST00000524226 STRBPQ96SI9 672 aaKnown RBP2.89□□□□□ -1.95
PCM1-222ENST00000524226 VCX3BQ9H321 246 aa2.89□□□□□ -1.95
PCM1-222ENST00000524226 NCOA5Q9HCD5 579 aaKnown RBP2.89□□□□□ -1.95
PCM1-222ENST00000524226 MCM9Q9NXL9 1143 aa2.89□□□□□ -1.95
PCM1-222ENST00000524226 BCAP29Q9UHQ4 241 aa2.89□□□□□ -1.95
PCM1-222ENST00000524226 ZNF831Q5JPB2 1677 aa2.89□□□□□ -1.95
PCM1-222ENST00000524226 COL5A3P25940 1745 aaPredicted RBP2.89□□□□□ -1.95
PCM1-222ENST00000524226 EBAG9O00559 213 aa2.89□□□□□ -1.95
PCM1-222ENST00000524226 CASQ2O14958 399 aaPredicted RBP2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms