RNA–Protein interactions for RNA: ENST00000524177.5

CSMD1-214, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-214ENST00000524177 ZMYM5Q9UJ78 669 aa5.03□□□□□ -1.6
CSMD1-214ENST00000524177 ADAMTS6Q9UKP5 1117 aa5.03□□□□□ -1.6
CSMD1-214ENST00000524177 PCDHB10Q9UN67 800 aa5.03□□□□□ -1.6
CSMD1-214ENST00000524177 SLC12A7Q9Y666 1083 aa5.03□□□□□ -1.6
CSMD1-214ENST00000524177 NEFMP07197 916 aa5.02□□□□□ -1.61
CSMD1-214ENST00000524177 CD96P40200 585 aa5.02□□□□□ -1.61
CSMD1-214ENST00000524177 CHMP4BP1P59074 171 aa5.02□□□□□ -1.61
CSMD1-214ENST00000524177 SLC10A6Q3KNW5 377 aa5.02□□□□□ -1.61
CSMD1-214ENST00000524177 VHLLQ6RSH7 139 aa5.02□□□□□ -1.61
CSMD1-214ENST00000524177 KIAA0907Q7Z7F0 614 aaPredicted RBP5.02□□□□□ -1.61
CSMD1-214ENST00000524177 PPFIBP1Q86W92 1011 aa5.02□□□□□ -1.61
CSMD1-214ENST00000524177 MRPL41Q8IXM3 137 aaKnown RBP5.02□□□□□ -1.61
CSMD1-214ENST00000524177 SLFN12Q8IYM2 578 aa5.02□□□□□ -1.61
CSMD1-214ENST00000524177 FAM181AQ8N9Y4 354 aa5.02□□□□□ -1.61
CSMD1-214ENST00000524177 THAP3Q8WTV1 239 aaPredicted RBP5.02□□□□□ -1.61
CSMD1-214ENST00000524177 ZNF669Q96BR6 464 aaPredicted RBP5.02□□□□□ -1.61
CSMD1-214ENST00000524177 MISP3Q96FF7 219 aa5.02□□□□□ -1.61
CSMD1-214ENST00000524177 TMEM87BQ96K49 555 aa5.02□□□□□ -1.61
CSMD1-214ENST00000524177 FANCD2OSQ96PS1 177 aa5.02□□□□□ -1.61
CSMD1-214ENST00000524177 SLC38A3Q99624 504 aa5.02□□□□□ -1.61
CSMD1-214ENST00000524177 GSX1Q9H4S2 264 aaPredicted RBP5.02□□□□□ -1.61
CSMD1-214ENST00000524177 PHAXQ9H814 394 aaKnown RBP5.02□□□□□ -1.61
CSMD1-214ENST00000524177 DISC1Q9NRI5 854 aa5.02□□□□□ -1.61
CSMD1-214ENST00000524177 MBNL3Q9NUK0 354 aaKnown RBP5.02□□□□□ -1.61
CSMD1-214ENST00000524177 PTCH2Q9Y6C5 1203 aa5.02□□□□□ -1.61
CSMD1-214ENST00000524177 KDM2BQ8NHM5 1336 aa5.01□□□□□ -1.61
CSMD1-214ENST00000524177 FANCGO15287 622 aa5.01□□□□□ -1.61
CSMD1-214ENST00000524177 SUSD5O60279 629 aa5.01□□□□□ -1.61
CSMD1-214ENST00000524177 SLFN14P0C7P3 912 aa5.01□□□□□ -1.61
CSMD1-214ENST00000524177 RAG1P15918 1043 aa5.01□□□□□ -1.61
CSMD1-214ENST00000524177 SSRP1Q08945 709 aaKnown RBP5.01□□□□□ -1.61
CSMD1-214ENST00000524177 NCAPHQ15003 741 aa5.01□□□□□ -1.61
CSMD1-214ENST00000524177 NKG7Q16617 165 aa5.01□□□□□ -1.61
CSMD1-214ENST00000524177 PTPROQ16827 1216 aa5.01□□□□□ -1.61
CSMD1-214ENST00000524177 TKFCQ3LXA3 575 aa5.01□□□□□ -1.61
CSMD1-214ENST00000524177 CYP27C1Q4G0S4 372 aa5.01□□□□□ -1.61
CSMD1-214ENST00000524177 HOMER1Q86YM7 354 aa5.01□□□□□ -1.61
CSMD1-214ENST00000524177 MCATQ8IVS2 390 aaKnown RBP5.01□□□□□ -1.61
CSMD1-214ENST00000524177 RNF214Q8ND24 703 aa5.01□□□□□ -1.61
CSMD1-214ENST00000524177 LRRN4CLQ8ND94 238 aa5.01□□□□□ -1.61
CSMD1-214ENST00000524177 FAM13CQ8NE31 585 aa5.01□□□□□ -1.61
CSMD1-214ENST00000524177 NETO1Q8TDF5 533 aa5.01□□□□□ -1.61
CSMD1-214ENST00000524177 APPBP2Q92624 585 aa5.01□□□□□ -1.61
CSMD1-214ENST00000524177 DPH2Q9BQC3 489 aaPredicted RBP5.01□□□□□ -1.61
CSMD1-214ENST00000524177 ZNF214Q9UL59 606 aaPredicted RBP5.01□□□□□ -1.61
CSMD1-214ENST00000524177 ADCY3O60266 1144 aa5□□□□□ -1.61
CSMD1-214ENST00000524177 UBOX5O94941 541 aa5□□□□□ -1.61
CSMD1-214ENST00000524177 CLSTN1O94985 981 aa5□□□□□ -1.61
CSMD1-214ENST00000524177 FAM87AP0C7U9 286 aa5□□□□□ -1.61
CSMD1-214ENST00000524177 CDK5R2Q13319 367 aa5□□□□□ -1.61
CSMD1-214ENST00000524177 KIAA1211LQ6NV74 962 aa5□□□□□ -1.61
CSMD1-214ENST00000524177 EEPD1Q7L9B9 569 aa5□□□□□ -1.61
CSMD1-214ENST00000524177 TMEM192Q8IY95 271 aa5□□□□□ -1.61
CSMD1-214ENST00000524177 PI4K2BQ8TCG2 481 aa5□□□□□ -1.61
CSMD1-214ENST00000524177 SLC6A18Q96N87 628 aa5□□□□□ -1.61
CSMD1-214ENST00000524177 PICK1Q9NRD5 415 aa5□□□□□ -1.61
CSMD1-214ENST00000524177 U3KQE9 123 aa5□□□□□ -1.61
CSMD1-214ENST00000524177 RGS13O14921 159 aa4.99□□□□□ -1.61
CSMD1-214ENST00000524177 HCLS1P14317 486 aaPredicted RBP4.99□□□□□ -1.61
CSMD1-214ENST00000524177 CAP2P40123 477 aa4.99□□□□□ -1.61
CSMD1-214ENST00000524177 CCNFP41002 786 aa4.99□□□□□ -1.61
CSMD1-214ENST00000524177 PMS1P54277 932 aaKnown RBP4.99□□□□□ -1.61
CSMD1-214ENST00000524177 YARSP54577 528 aaKnown RBP4.99□□□□□ -1.61
CSMD1-214ENST00000524177 SLC7A5Q01650 507 aa4.99□□□□□ -1.61
CSMD1-214ENST00000524177 MESP2Q0VG99 397 aa4.99□□□□□ -1.61
CSMD1-214ENST00000524177 SLBPQ14493 270 aaKnown RBP eCLIP4.99□□□□□ -1.61
CSMD1-214ENST00000524177 TTLL4Q14679 1199 aa4.99□□□□□ -1.61
CSMD1-214ENST00000524177 RNF187Q5TA31 235 aaPredicted RBP4.99□□□□□ -1.61
CSMD1-214ENST00000524177 TDRD10Q5VZ19 366 aaKnown RBP4.99□□□□□ -1.61
CSMD1-214ENST00000524177 SLC6A19Q695T7 634 aa4.99□□□□□ -1.61
CSMD1-214ENST00000524177 C16orf86Q6ZW13 317 aa4.99□□□□□ -1.61
CSMD1-214ENST00000524177 FILIP1Q7Z7B0 1213 aa4.99□□□□□ -1.61
CSMD1-214ENST00000524177 HID1Q8IV36 788 aa4.99□□□□□ -1.61
CSMD1-214ENST00000524177 ISL2Q96A47 359 aa4.99□□□□□ -1.61
CSMD1-214ENST00000524177 KIF2CQ99661 725 aa4.99□□□□□ -1.61
CSMD1-214ENST00000524177 FEZ1Q99689 392 aa4.99□□□□□ -1.61
CSMD1-214ENST00000524177 BRINP2Q9C0B6 783 aa4.99□□□□□ -1.61
CSMD1-214ENST00000524177 ATXN3LQ9H3M9 355 aa4.99□□□□□ -1.61
CSMD1-214ENST00000524177 IFT57Q9NWB7 429 aa4.99□□□□□ -1.61
CSMD1-214ENST00000524177 SUSD2Q9UGT4 822 aa4.99□□□□□ -1.61
CSMD1-214ENST00000524177 C9IYK1 514 aa4.98□□□□□ -1.61
CSMD1-214ENST00000524177 FAM153BP0C7A2 387 aa4.98□□□□□ -1.61
CSMD1-214ENST00000524177 ZNF865P0CJ78 1059 aaPredicted RBP4.98□□□□□ -1.61
CSMD1-214ENST00000524177 PRKCQQ04759 706 aa4.98□□□□□ -1.61
CSMD1-214ENST00000524177 GNPTABQ3T906 1256 aa4.98□□□□□ -1.61
CSMD1-214ENST00000524177 PRAMEF13Q5VWM6 474 aa4.98□□□□□ -1.61
CSMD1-214ENST00000524177 PHACTR4Q8IZ21 702 aa4.98□□□□□ -1.61
CSMD1-214ENST00000524177 BAHD1Q8TBE0 780 aaPredicted RBP4.98□□□□□ -1.61
CSMD1-214ENST00000524177 ZNF507Q8TCN5 953 aa4.98□□□□□ -1.61
CSMD1-214ENST00000524177 CYB5D2Q8WUJ1 264 aa4.98□□□□□ -1.61
CSMD1-214ENST00000524177 FAM84AQ96KN4 292 aa4.98□□□□□ -1.61
CSMD1-214ENST00000524177 SPATA9Q9BWV2 254 aa4.98□□□□□ -1.61
CSMD1-214ENST00000524177 KRTAP4-5Q9BYR2 181 aa4.98□□□□□ -1.61
CSMD1-214ENST00000524177 EPN3Q9H201 632 aa4.98□□□□□ -1.61
CSMD1-214ENST00000524177 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.98□□□□□ -1.61
CSMD1-214ENST00000524177 SUCOQ9UBS9 1254 aaKnown RBP4.98□□□□□ -1.61
CSMD1-214ENST00000524177 VAV3Q9UKW4 847 aa4.98□□□□□ -1.61
CSMD1-214ENST00000524177 PRKAB1Q9Y478 270 aa4.98□□□□□ -1.61
CSMD1-214ENST00000524177 COL4A3BPQ9Y5P4 624 aa4.98□□□□□ -1.61
CSMD1-214ENST00000524177 LRRC10BA6NIK2 292 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms