RNA–Protein interactions for RNA: ENST00000524057.3

SORBS3-222, Transcript of sorbin and SH3 domain containing 3, human

TSL 3

Gene SORBS3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SORBS3-222	ENST00000524057	SRGAP3	O43295	1099 aa		13.17	□□□□□ -0.3
SORBS3-222	ENST00000524057	PLCG2	P16885	1265 aa		13.17	□□□□□ -0.3
SORBS3-222	ENST00000524057	TAL1	P17542	331 aa	Predicted RBP	13.17	□□□□□ -0.3
SORBS3-222	ENST00000524057	ACLY	P53396	1101 aa		13.17	□□□□□ -0.3
SORBS3-222	ENST00000524057	ATP8B2	P98198	1209 aa		13.17	□□□□□ -0.3
SORBS3-222	ENST00000524057	NAA16	Q6N069	864 aa	Predicted RBP	13.17	□□□□□ -0.3
SORBS3-222	ENST00000524057	CCDC174	Q6PII3	467 aa		13.17	□□□□□ -0.3
SORBS3-222	ENST00000524057	ABRA	Q8N0Z2	381 aa		13.17	□□□□□ -0.3
SORBS3-222	ENST00000524057	MICALL1	Q8N3F8	863 aa		13.17	□□□□□ -0.3
SORBS3-222	ENST00000524057	SSH3	Q8TE77	659 aa		13.17	□□□□□ -0.3
SORBS3-222	ENST00000524057	KHSRP	Q92945	711 aa	Known RBP eCLIP	13.17	□□□□□ -0.3
SORBS3-222	ENST00000524057	TSEN34	Q9BSV6	310 aa	Known RBP	13.17	□□□□□ -0.3
SORBS3-222	ENST00000524057	MROH8	Q9H579	483 aa		13.17	□□□□□ -0.3
SORBS3-222	ENST00000524057	ZBTB40	Q9NUA8	1239 aa		13.17	□□□□□ -0.3
SORBS3-222	ENST00000524057	CHD7	Q9P2D1	2997 aa		13.17	□□□□□ -0.3
SORBS3-222	ENST00000524057	NRBP1	Q9UHY1	535 aa		13.17	□□□□□ -0.3
SORBS3-222	ENST00000524057	TLL1	O43897	1013 aa		13.16	□□□□□ -0.3
SORBS3-222	ENST00000524057	ADAMTS4	O75173	837 aa		13.16	□□□□□ -0.3
SORBS3-222	ENST00000524057	HLA-DOA	P06340	250 aa		13.16	□□□□□ -0.3
SORBS3-222	ENST00000524057	ZNF865	P0CJ78	1059 aa	Predicted RBP	13.16	□□□□□ -0.3
SORBS3-222	ENST00000524057	ARID4A	P29374	1257 aa	Predicted RBP	13.16	□□□□□ -0.3
SORBS3-222	ENST00000524057	MCAM	P43121	646 aa		13.16	□□□□□ -0.3
SORBS3-222	ENST00000524057	CDK7	P50613	346 aa		13.16	□□□□□ -0.3
SORBS3-222	ENST00000524057	GORAB	Q5T7V8	394 aa		13.16	□□□□□ -0.3
SORBS3-222	ENST00000524057	CEP85	Q6P2H3	762 aa		13.16	□□□□□ -0.3
SORBS3-222	ENST00000524057	NCAPG2	Q86XI2	1143 aa		13.16	□□□□□ -0.3
SORBS3-222	ENST00000524057	TMEM199	Q8N511	208 aa		13.16	□□□□□ -0.3
SORBS3-222	ENST00000524057	NUP133	Q8WUM0	1156 aa		13.16	□□□□□ -0.3
SORBS3-222	ENST00000524057	HERVK_113	Q902F9	699 aa		13.16	□□□□□ -0.3
SORBS3-222	ENST00000524057	SNX27	Q96L92	541 aa		13.16	□□□□□ -0.3
SORBS3-222	ENST00000524057	PIEZO1	Q92508	2521 aa		13.15	□□□□□ -0.3
SORBS3-222	ENST00000524057	PLS1	Q14651	629 aa		13.15	□□□□□ -0.3
SORBS3-222	ENST00000524057	ABCB5	Q2M3G0	1257 aa		13.15	□□□□□ -0.3
SORBS3-222	ENST00000524057	CERKL	Q49MI3	558 aa	Predicted RBP	13.15	□□□□□ -0.3
SORBS3-222	ENST00000524057	CCSAP	Q6IQ19	270 aa	Predicted RBP	13.15	□□□□□ -0.3
SORBS3-222	ENST00000524057	PSRC1	Q6PGN9	363 aa	Predicted RBP	13.15	□□□□□ -0.3
SORBS3-222	ENST00000524057	FTSJ3	Q8IY81	847 aa	Known RBP	13.15	□□□□□ -0.3
SORBS3-222	ENST00000524057	KLHDC9	Q8NEP7	349 aa		13.15	□□□□□ -0.3
SORBS3-222	ENST00000524057	LENG1	Q96BZ8	264 aa	Predicted RBP	13.15	□□□□□ -0.3
SORBS3-222	ENST00000524057	TINF2	Q9BSI4	451 aa		13.15	□□□□□ -0.3
SORBS3-222	ENST00000524057	FAM86C2P	A6NEL3	165 aa		13.14	□□□□□ -0.31
SORBS3-222	ENST00000524057	FCER1A	P12319	257 aa		13.14	□□□□□ -0.31
SORBS3-222	ENST00000524057	GUCY1A2	P33402	732 aa		13.14	□□□□□ -0.31
SORBS3-222	ENST00000524057	DYNLL1	P63167	89 aa	Known RBP	13.14	□□□□□ -0.31
SORBS3-222	ENST00000524057	SKIV2L	Q15477	1246 aa	Known RBP	13.14	□□□□□ -0.31
SORBS3-222	ENST00000524057	KCNA10	Q16322	511 aa		13.14	□□□□□ -0.31
SORBS3-222	ENST00000524057	PPP1R12C	Q9BZL4	782 aa		13.14	□□□□□ -0.31
SORBS3-222	ENST00000524057	SNRK	Q9NRH2	765 aa		13.14	□□□□□ -0.31
SORBS3-222	ENST00000524057	ZNF236	Q9UL36	1845 aa		13.13	□□□□□ -0.31
SORBS3-222	ENST00000524057		A0A1W2PRG0	241 aa		13.13	□□□□□ -0.31
SORBS3-222	ENST00000524057	MOXD2P	A6NHM9	499 aa		13.13	□□□□□ -0.31
SORBS3-222	ENST00000524057	FGB	P02675	491 aa		13.13	□□□□□ -0.31
SORBS3-222	ENST00000524057	PGK2	P07205	417 aa		13.13	□□□□□ -0.31
SORBS3-222	ENST00000524057	AKR1A1	P14550	325 aa		13.13	□□□□□ -0.31
SORBS3-222	ENST00000524057	MYOG	P15173	224 aa		13.13	□□□□□ -0.31
SORBS3-222	ENST00000524057	DSG3	P32926	999 aa		13.13	□□□□□ -0.31
SORBS3-222	ENST00000524057	RABGGTB	P53611	331 aa		13.13	□□□□□ -0.31
SORBS3-222	ENST00000524057	CABP5	Q9NP86	173 aa		13.13	□□□□□ -0.31
SORBS3-222	ENST00000524057	IL23A	Q9NPF7	189 aa		13.13	□□□□□ -0.31
SORBS3-222	ENST00000524057	SERPINB13	Q9UIV8	391 aa		13.13	□□□□□ -0.31
SORBS3-222	ENST00000524057	NOP58	Q9Y2X3	529 aa	Known RBP	13.13	□□□□□ -0.31
SORBS3-222	ENST00000524057	ELP1	O95163	1332 aa		13.13	□□□□□ -0.31
SORBS3-222	ENST00000524057	PI4K2B	G5E9Z4	385 aa		13.12	□□□□□ -0.31
SORBS3-222	ENST00000524057	SMIM22	K7EJ46	135 aa		13.12	□□□□□ -0.31
SORBS3-222	ENST00000524057	RFXAP	O00287	272 aa		13.12	□□□□□ -0.31
SORBS3-222	ENST00000524057	UQCRFS1P1	P0C7P4	283 aa		13.12	□□□□□ -0.31
SORBS3-222	ENST00000524057	POU3F3	P20264	500 aa	Predicted RBP	13.12	□□□□□ -0.31
SORBS3-222	ENST00000524057	CYP2C18	P33260	490 aa		13.12	□□□□□ -0.31
SORBS3-222	ENST00000524057	IRX5	P78411	483 aa	Predicted RBP	13.12	□□□□□ -0.31
SORBS3-222	ENST00000524057	SEPT2	Q15019	361 aa		13.12	□□□□□ -0.31
SORBS3-222	ENST00000524057	ZNF792	Q3KQV3	632 aa		13.12	□□□□□ -0.31
SORBS3-222	ENST00000524057	KIAA1755	Q5JYT7	1200 aa		13.12	□□□□□ -0.31
SORBS3-222	ENST00000524057	MB21D1	Q8N884	522 aa		13.12	□□□□□ -0.31
SORBS3-222	ENST00000524057	TANGO6	Q9C0B7	1094 aa		13.12	□□□□□ -0.31
SORBS3-222	ENST00000524057	EHD4	Q9H223	541 aa		13.12	□□□□□ -0.31
SORBS3-222	ENST00000524057	DIS3	Q9Y2L1	958 aa	Known RBP	13.12	□□□□□ -0.31
SORBS3-222	ENST00000524057	MTCH2	Q9Y6C9	303 aa		13.12	□□□□□ -0.31
SORBS3-222	ENST00000524057	MUC6	Q6W4X9	2439 aa		13.12	□□□□□ -0.31
SORBS3-222	ENST00000524057	MROH7	Q68CQ1	1323 aa		13.12	□□□□□ -0.31
SORBS3-222	ENST00000524057	SYNRG	Q9UMZ2	1314 aa		13.12	□□□□□ -0.31
SORBS3-222	ENST00000524057	MYADML2	A6NDP7	307 aa		13.11	□□□□□ -0.31
SORBS3-222	ENST00000524057	ARVCF	O00192	962 aa		13.11	□□□□□ -0.31
SORBS3-222	ENST00000524057	APBB1	O00213	710 aa		13.11	□□□□□ -0.31
SORBS3-222	ENST00000524057	CYP2E1	P05181	493 aa	Predicted RBP	13.11	□□□□□ -0.31
SORBS3-222	ENST00000524057	SHMT1	P34896	483 aa		13.11	□□□□□ -0.31
SORBS3-222	ENST00000524057	MRE11	P49959	708 aa		13.11	□□□□□ -0.31
SORBS3-222	ENST00000524057	PPP2R2D	Q66LE6	453 aa		13.11	□□□□□ -0.31
SORBS3-222	ENST00000524057	OTOP2	Q7RTS6	562 aa		13.11	□□□□□ -0.31
SORBS3-222	ENST00000524057	VTI1A	Q96AJ9	217 aa		13.11	□□□□□ -0.31
SORBS3-222	ENST00000524057	ATG4C	Q96DT6	458 aa		13.11	□□□□□ -0.31
SORBS3-222	ENST00000524057	GLT1D1	Q96MS3	346 aa		13.11	□□□□□ -0.31
SORBS3-222	ENST00000524057	CD320	Q9NPF0	282 aa		13.11	□□□□□ -0.31
SORBS3-222	ENST00000524057	COG5	Q9UP83	839 aa		13.11	□□□□□ -0.31
SORBS3-222	ENST00000524057	HDAC5	Q9UQL6	1122 aa		13.11	□□□□□ -0.31
SORBS3-222	ENST00000524057	ASGR1	P07306	291 aa		13.1	□□□□□ -0.31
SORBS3-222	ENST00000524057	PLCD1	P51178	756 aa		13.1	□□□□□ -0.31
SORBS3-222	ENST00000524057	RRP1	P56182	461 aa	Known RBP	13.1	□□□□□ -0.31
SORBS3-222	ENST00000524057	TMEM132B	Q14DG7	1078 aa		13.1	□□□□□ -0.31
SORBS3-222	ENST00000524057	FAM126B	Q8IXS8	530 aa		13.1	□□□□□ -0.31
SORBS3-222	ENST00000524057	MMP19	Q99542	508 aa		13.1	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms