RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 MSRAQ9UJ68 235 aa11.36□□□□□ -0.59
PTPN12-216ENST00000523952 HCN4Q9Y3Q4 1203 aa11.36□□□□□ -0.59
PTPN12-216ENST00000523952 COBLO75128 1261 aa11.35□□□□□ -0.59
PTPN12-216ENST00000523952 PGK1P00558 417 aa11.35□□□□□ -0.59
PTPN12-216ENST00000523952 ITGB8P26012 769 aa11.35□□□□□ -0.59
PTPN12-216ENST00000523952 TATDN1Q6P1N9 297 aa11.35□□□□□ -0.59
PTPN12-216ENST00000523952 ADGRA1Q86SQ6 560 aa11.35□□□□□ -0.59
PTPN12-216ENST00000523952 MB21D1Q8N884 522 aa11.35□□□□□ -0.59
PTPN12-216ENST00000523952 VTI1AQ96AJ9 217 aa11.35□□□□□ -0.59
PTPN12-216ENST00000523952 MAML3Q96JK9 1138 aa11.35□□□□□ -0.59
PTPN12-216ENST00000523952 STARD7Q9NQZ5 370 aa11.35□□□□□ -0.59
PTPN12-216ENST00000523952 NOB1Q9ULX3 412 aaKnown RBP11.35□□□□□ -0.59
PTPN12-216ENST00000523952 LRRC37A2A6NM11 1700 aa11.35□□□□□ -0.59
PTPN12-216ENST00000523952 MROH7Q68CQ1 1323 aa11.35□□□□□ -0.59
PTPN12-216ENST00000523952 IDH1O75874 414 aaKnown RBP11.34□□□□□ -0.59
PTPN12-216ENST00000523952 FLOT1O75955 427 aa11.34□□□□□ -0.59
PTPN12-216ENST00000523952 TIMP1P01033 207 aa11.34□□□□□ -0.59
PTPN12-216ENST00000523952 POLR3DP05423 398 aaPredicted RBP11.34□□□□□ -0.59
PTPN12-216ENST00000523952 RAB30Q15771 203 aa11.34□□□□□ -0.59
PTPN12-216ENST00000523952 ABRAQ8N0Z2 381 aa11.34□□□□□ -0.59
PTPN12-216ENST00000523952 MICALL1Q8N3F8 863 aa11.34□□□□□ -0.59
PTPN12-216ENST00000523952 MIGA1Q8NAN2 632 aa11.34□□□□□ -0.59
PTPN12-216ENST00000523952 MMP19Q99542 508 aa11.34□□□□□ -0.59
PTPN12-216ENST00000523952 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.34□□□□□ -0.59
PTPN12-216ENST00000523952 EHD4Q9H223 541 aa11.34□□□□□ -0.59
PTPN12-216ENST00000523952 MTIF3Q9H2K0 278 aaKnown RBP11.34□□□□□ -0.59
PTPN12-216ENST00000523952 NRBP1Q9UHY1 535 aa11.34□□□□□ -0.59
PTPN12-216ENST00000523952 CNPY2Q9Y2B0 182 aa11.34□□□□□ -0.59
PTPN12-216ENST00000523952 IGSF3O75054 1194 aa11.33□□□□□ -0.6
PTPN12-216ENST00000523952 AKR1A1P14550 325 aa11.33□□□□□ -0.6
PTPN12-216ENST00000523952 FAAP100Q0VG06 881 aa11.33□□□□□ -0.6
PTPN12-216ENST00000523952 KCTD2Q14681 263 aa11.33□□□□□ -0.6
PTPN12-216ENST00000523952 SEPT2Q15019 361 aa11.33□□□□□ -0.6
PTPN12-216ENST00000523952 SKIV2LQ15477 1246 aaKnown RBP11.33□□□□□ -0.6
PTPN12-216ENST00000523952 AAK1Q2M2I8 961 aa11.33□□□□□ -0.6
PTPN12-216ENST00000523952 MFSD5Q6N075 450 aa11.33□□□□□ -0.6
PTPN12-216ENST00000523952 TMEM199Q8N511 208 aa11.33□□□□□ -0.6
PTPN12-216ENST00000523952 TOX2Q96NM4 488 aa11.33□□□□□ -0.6
PTPN12-216ENST00000523952 PBX4Q9BYU1 374 aa11.33□□□□□ -0.6
PTPN12-216ENST00000523952 SH2D4AQ9H788 454 aa11.33□□□□□ -0.6
PTPN12-216ENST00000523952 SLC28A3Q9HAS3 691 aa11.33□□□□□ -0.6
PTPN12-216ENST00000523952 ARHGEF10LQ9HCE6 1279 aa11.33□□□□□ -0.6
PTPN12-216ENST00000523952 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.33□□□□□ -0.6
PTPN12-216ENST00000523952 GRXCR1A8MXD5 290 aa11.32□□□□□ -0.6
PTPN12-216ENST00000523952 TLR3O15455 904 aaKnown RBP11.32□□□□□ -0.6
PTPN12-216ENST00000523952 SLC25A27O95847 323 aa11.32□□□□□ -0.6
PTPN12-216ENST00000523952 IGHA2P01877 340 aa11.32□□□□□ -0.6
PTPN12-216ENST00000523952 CYP2E1P05181 493 aaPredicted RBP11.32□□□□□ -0.6
PTPN12-216ENST00000523952 PBX2P40425 430 aa11.32□□□□□ -0.6
PTPN12-216ENST00000523952 ACLYP53396 1101 aa11.32□□□□□ -0.6
PTPN12-216ENST00000523952 PSRC1Q6PGN9 363 aaPredicted RBP11.32□□□□□ -0.6
PTPN12-216ENST00000523952 MAGEB6Q8N7X4 407 aa11.32□□□□□ -0.6
PTPN12-216ENST00000523952 GLT1D1Q96MS3 346 aa11.32□□□□□ -0.6
PTPN12-216ENST00000523952 TINF2Q9BSI4 451 aa11.32□□□□□ -0.6
PTPN12-216ENST00000523952 TSEN34Q9BSV6 310 aaKnown RBP11.32□□□□□ -0.6
PTPN12-216ENST00000523952 ZNF521Q96K83 1311 aa11.32□□□□□ -0.6
PTPN12-216ENST00000523952 SCN5AQ14524 2016 aa11.31□□□□□ -0.6
PTPN12-216ENST00000523952 MOXD2PA6NHM9 499 aa11.31□□□□□ -0.6
PTPN12-216ENST00000523952 GNAI2P04899 355 aa11.31□□□□□ -0.6
PTPN12-216ENST00000523952 ZAP70P43403 619 aa11.31□□□□□ -0.6
PTPN12-216ENST00000523952 MTX1Q13505 466 aa11.31□□□□□ -0.6
PTPN12-216ENST00000523952 TNNI3KQ59H18 835 aa11.31□□□□□ -0.6
PTPN12-216ENST00000523952 ANKRD33Q7Z3H0 272 aa11.31□□□□□ -0.6
PTPN12-216ENST00000523952 ATG4CQ96DT6 458 aa11.31□□□□□ -0.6
PTPN12-216ENST00000523952 CDCA7LQ96GN5 454 aa11.31□□□□□ -0.6
PTPN12-216ENST00000523952 DBNDD2Q9BQY9 259 aa11.31□□□□□ -0.6
PTPN12-216ENST00000523952 PPP1R12CQ9BZL4 782 aa11.31□□□□□ -0.6
PTPN12-216ENST00000523952 SPC25Q9HBM1 224 aa11.31□□□□□ -0.6
PTPN12-216ENST00000523952 FPGT-TNNI3KV9GXZ4 949 aa11.31□□□□□ -0.6
PTPN12-216ENST00000523952 REV3LO60673 3130 aa11.31□□□□□ -0.6
PTPN12-216ENST00000523952 RAD21O60216 631 aa11.3□□□□□ -0.6
PTPN12-216ENST00000523952 PGK2P07205 417 aa11.3□□□□□ -0.6
PTPN12-216ENST00000523952 ACRP10323 421 aa11.3□□□□□ -0.6
PTPN12-216ENST00000523952 CSF2RAP15509 400 aa11.3□□□□□ -0.6
PTPN12-216ENST00000523952 SHMT1P34896 483 aa11.3□□□□□ -0.6
PTPN12-216ENST00000523952 SLFN5Q08AF3 891 aa11.3□□□□□ -0.6
PTPN12-216ENST00000523952 TMEM240Q5SV17 173 aa11.3□□□□□ -0.6
PTPN12-216ENST00000523952 SPICE1Q8N0Z3 855 aa11.3□□□□□ -0.6
PTPN12-216ENST00000523952 PCSK9Q8NBP7 692 aaKnown RBP11.3□□□□□ -0.6
PTPN12-216ENST00000523952 LENG1Q96BZ8 264 aaPredicted RBP11.3□□□□□ -0.6
PTPN12-216ENST00000523952 NKX2-4Q9H2Z4 354 aa11.3□□□□□ -0.6
PTPN12-216ENST00000523952 PIH1D3Q9NQM4 214 aaKnown RBP11.3□□□□□ -0.6
PTPN12-216ENST00000523952 FAM184BQ9ULE4 1060 aa11.3□□□□□ -0.6
PTPN12-216ENST00000523952 SYNRGQ9UMZ2 1314 aa11.3□□□□□ -0.6
PTPN12-216ENST00000523952 ROBO3Q96MS0 1386 aa11.29□□□□□ -0.6
PTPN12-216ENST00000523952 C6orf222P0C671 652 aaPredicted RBP11.29□□□□□ -0.6
PTPN12-216ENST00000523952 COPB2P35606 906 aa11.29□□□□□ -0.6
PTPN12-216ENST00000523952 PLCD1P51178 756 aa11.29□□□□□ -0.6
PTPN12-216ENST00000523952 KCNA10Q16322 511 aa11.29□□□□□ -0.6
PTPN12-216ENST00000523952 TMEM179Q6ZVK1 233 aa11.29□□□□□ -0.6
PTPN12-216ENST00000523952 ZNF365Q70YC5 407 aa11.29□□□□□ -0.6
PTPN12-216ENST00000523952 NECAB3Q96P71 396 aaPredicted RBP11.29□□□□□ -0.6
PTPN12-216ENST00000523952 CRNKL1Q9BZJ0 848 aaKnown RBP11.29□□□□□ -0.6
PTPN12-216ENST00000523952 GPR108Q9NPR9 543 aa11.29□□□□□ -0.6
PTPN12-216ENST00000523952 MCM9Q9NXL9 1143 aa11.29□□□□□ -0.6
PTPN12-216ENST00000523952 CXXC1Q9P0U4 656 aaPredicted RBP11.29□□□□□ -0.6
PTPN12-216ENST00000523952 ZHX1Q9UKY1 873 aaPredicted RBP11.29□□□□□ -0.6
PTPN12-216ENST00000523952 DIS3Q9Y2L1 958 aaKnown RBP11.29□□□□□ -0.6
PTPN12-216ENST00000523952 PRRC2BQ5JSZ5 2229 aaKnown RBP11.29□□□□□ -0.6
PTPN12-216ENST00000523952 CHD9Q3L8U1 2897 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms