RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 IGHA2P01877 340 aa14.15□□□□□ -0.14
SDCBP-211ENST00000523441 FAAP100Q0VG06 881 aa14.15□□□□□ -0.14
SDCBP-211ENST00000523441 NECAB3Q96P71 396 aaPredicted RBP14.15□□□□□ -0.14
SDCBP-211ENST00000523441 UHRF1Q96T88 793 aaPredicted RBP14.15□□□□□ -0.14
SDCBP-211ENST00000523441 MMP19Q99542 508 aa14.15□□□□□ -0.14
SDCBP-211ENST00000523441 PPP1R12CQ9BZL4 782 aa14.15□□□□□ -0.14
SDCBP-211ENST00000523441 EHD4Q9H223 541 aa14.15□□□□□ -0.14
SDCBP-211ENST00000523441 MROH8Q9H579 483 aa14.15□□□□□ -0.14
SDCBP-211ENST00000523441 STARD7Q9NQZ5 370 aa14.15□□□□□ -0.14
SDCBP-211ENST00000523441 THEGQ9P2T0 379 aa14.15□□□□□ -0.14
SDCBP-211ENST00000523441 MUC3AQ02505 3323 aa14.14□□□□□ -0.15
SDCBP-211ENST00000523441 CYP2D6P10635 497 aa14.14□□□□□ -0.15
SDCBP-211ENST00000523441 DSG3P32926 999 aa14.14□□□□□ -0.15
SDCBP-211ENST00000523441 IRX5P78411 483 aaPredicted RBP14.14□□□□□ -0.15
SDCBP-211ENST00000523441 SHCBP1Q8NEM2 672 aa14.14□□□□□ -0.15
SDCBP-211ENST00000523441 ASB2Q96Q27 587 aa14.14□□□□□ -0.15
SDCBP-211ENST00000523441 PBX4Q9BYU1 374 aa14.14□□□□□ -0.15
SDCBP-211ENST00000523441 MCM9Q9NXL9 1143 aa14.14□□□□□ -0.15
SDCBP-211ENST00000523441 DBNLQ9UJU6 430 aaKnown RBP14.14□□□□□ -0.15
SDCBP-211ENST00000523441 MAGEB6P1A0A0J9YX57 407 aa14.13□□□□□ -0.15
SDCBP-211ENST00000523441 ACLYP53396 1101 aa14.13□□□□□ -0.15
SDCBP-211ENST00000523441 RARSP54136 660 aaKnown RBP14.13□□□□□ -0.15
SDCBP-211ENST00000523441 C1orf53Q5VUE5 145 aa14.13□□□□□ -0.15
SDCBP-211ENST00000523441 DYNLL2Q96FJ2 89 aa14.13□□□□□ -0.15
SDCBP-211ENST00000523441 TINF2Q9BSI4 451 aa14.13□□□□□ -0.15
SDCBP-211ENST00000523441 FBXO28Q9NVF7 368 aa14.13□□□□□ -0.15
SDCBP-211ENST00000523441 ZHX1Q9UKY1 873 aaPredicted RBP14.13□□□□□ -0.15
SDCBP-211ENST00000523441 BAZ2AQ9UIF9 1905 aaKnown RBP14.13□□□□□ -0.15
SDCBP-211ENST00000523441 TIMP1P01033 207 aa14.12□□□□□ -0.15
SDCBP-211ENST00000523441 CSF2RAP15509 400 aa14.12□□□□□ -0.15
SDCBP-211ENST00000523441 PLA2G5P39877 138 aa14.12□□□□□ -0.15
SDCBP-211ENST00000523441 MRPS5P82675 430 aaKnown RBP14.12□□□□□ -0.15
SDCBP-211ENST00000523441 MAP3K12Q12852 859 aa14.12□□□□□ -0.15
SDCBP-211ENST00000523441 KCTD2Q14681 263 aa14.12□□□□□ -0.15
SDCBP-211ENST00000523441 TMEM132BQ14DG7 1078 aa14.12□□□□□ -0.15
SDCBP-211ENST00000523441 SDR42E1Q8WUS8 393 aa14.12□□□□□ -0.15
SDCBP-211ENST00000523441 NKX2-4Q9H2Z4 354 aa14.12□□□□□ -0.15
SDCBP-211ENST00000523441 SYNRGQ9UMZ2 1314 aa14.12□□□□□ -0.15
SDCBP-211ENST00000523441 BDP1A6H8Y1 2624 aa14.11□□□□□ -0.15
SDCBP-211ENST00000523441 MCM3APO60318 1980 aa14.11□□□□□ -0.15
SDCBP-211ENST00000523441 MYADML2A6NDP7 307 aa14.11□□□□□ -0.15
SDCBP-211ENST00000523441 AKR1A1P14550 325 aa14.11□□□□□ -0.15
SDCBP-211ENST00000523441 AKR1B1P15121 316 aa14.11□□□□□ -0.15
SDCBP-211ENST00000523441 ADGRE1Q14246 886 aa14.11□□□□□ -0.15
SDCBP-211ENST00000523441 SKIV2LQ15477 1246 aaKnown RBP14.11□□□□□ -0.15
SDCBP-211ENST00000523441 KCNA10Q16322 511 aa14.11□□□□□ -0.15
SDCBP-211ENST00000523441 TMEM240Q5SV17 173 aa14.11□□□□□ -0.15
SDCBP-211ENST00000523441 ZNF365Q70YC5 407 aa14.11□□□□□ -0.15
SDCBP-211ENST00000523441 MB21D1Q8N884 522 aa14.11□□□□□ -0.15
SDCBP-211ENST00000523441 ATXN2LQ8WWM7 1075 aaKnown RBP14.11□□□□□ -0.15
SDCBP-211ENST00000523441 ARHGEF10LQ9HCE6 1279 aa14.11□□□□□ -0.15
SDCBP-211ENST00000523441 GPR108Q9NPR9 543 aa14.11□□□□□ -0.15
SDCBP-211ENST00000523441 CNPY2Q9Y2B0 182 aa14.11□□□□□ -0.15
SDCBP-211ENST00000523441 ZNF865P0CJ78 1059 aaPredicted RBP14.1□□□□□ -0.15
SDCBP-211ENST00000523441 TRIM27P14373 513 aa14.1□□□□□ -0.15
SDCBP-211ENST00000523441 ICA1Q05084 483 aa14.1□□□□□ -0.15
SDCBP-211ENST00000523441 PPIGQ13427 754 aaKnown RBP eCLIP14.1□□□□□ -0.15
SDCBP-211ENST00000523441 MFSD5Q6N075 450 aa14.1□□□□□ -0.15
SDCBP-211ENST00000523441 C16orf59Q7L2K0 433 aa14.1□□□□□ -0.15
SDCBP-211ENST00000523441 ABRAQ8N0Z2 381 aa14.1□□□□□ -0.15
SDCBP-211ENST00000523441 NUP133Q8WUM0 1156 aa14.1□□□□□ -0.15
SDCBP-211ENST00000523441 EAF2Q96CJ1 260 aaPredicted RBP14.1□□□□□ -0.15
SDCBP-211ENST00000523441 CRNKL1Q9BZJ0 848 aaKnown RBP14.1□□□□□ -0.15
SDCBP-211ENST00000523441 MSRAQ9UJ68 235 aa14.1□□□□□ -0.15
SDCBP-211ENST00000523441 ADAMTS4O75173 837 aa14.09□□□□□ -0.15
SDCBP-211ENST00000523441 C6orf222P0C671 652 aaPredicted RBP14.09□□□□□ -0.15
SDCBP-211ENST00000523441 CYP2C18P33260 490 aa14.09□□□□□ -0.15
SDCBP-211ENST00000523441 TFF2Q03403 129 aa14.09□□□□□ -0.15
SDCBP-211ENST00000523441 TMEM179Q6ZVK1 233 aa14.09□□□□□ -0.15
SDCBP-211ENST00000523441 TMEM57Q8N5G2 664 aa14.09□□□□□ -0.15
SDCBP-211ENST00000523441 RIOK1Q9BRS2 568 aaKnown RBP14.09□□□□□ -0.15
SDCBP-211ENST00000523441 VCPKMTQ9H867 229 aa14.09□□□□□ -0.15
SDCBP-211ENST00000523441 CHD9Q3L8U1 2897 aa14.08□□□□□ -0.15
SDCBP-211ENST00000523441 CYP2D7A0A087X1C5 515 aa14.08□□□□□ -0.16
SDCBP-211ENST00000523441 SMIM22K7EJ46 135 aa14.08□□□□□ -0.16
SDCBP-211ENST00000523441 SLC25A27O95847 323 aa14.08□□□□□ -0.16
SDCBP-211ENST00000523441 STAT3P40763 770 aa14.08□□□□□ -0.16
SDCBP-211ENST00000523441 RABGGTBP53611 331 aa14.08□□□□□ -0.16
SDCBP-211ENST00000523441 GABPAQ06546 454 aa14.08□□□□□ -0.16
SDCBP-211ENST00000523441 POLA2Q14181 598 aa14.08□□□□□ -0.16
SDCBP-211ENST00000523441 ZNF792Q3KQV3 632 aa14.08□□□□□ -0.16
SDCBP-211ENST00000523441 SLC9C2Q5TAH2 1124 aa14.08□□□□□ -0.16
SDCBP-211ENST00000523441 CCDC174Q6PII3 467 aa14.08□□□□□ -0.16
SDCBP-211ENST00000523441 ANKRD33Q7Z3H0 272 aa14.08□□□□□ -0.16
SDCBP-211ENST00000523441 CERS3Q8IU89 383 aa14.08□□□□□ -0.16
SDCBP-211ENST00000523441 TRMT2AQ8IZ69 625 aaKnown RBP14.08□□□□□ -0.16
SDCBP-211ENST00000523441 STK11IPQ8N1F8 1099 aa14.08□□□□□ -0.16
SDCBP-211ENST00000523441 TMEM199Q8N511 208 aa14.08□□□□□ -0.16
SDCBP-211ENST00000523441 ARHGAP45Q92619 1136 aa14.08□□□□□ -0.16
SDCBP-211ENST00000523441 DDX11Q96FC9 970 aa14.08□□□□□ -0.16
SDCBP-211ENST00000523441 ZNF512BQ96KM6 892 aaPredicted RBP14.08□□□□□ -0.16
SDCBP-211ENST00000523441 GLT1D1Q96MS3 346 aa14.08□□□□□ -0.16
SDCBP-211ENST00000523441 ARMT1Q9H993 441 aa14.08□□□□□ -0.16
SDCBP-211ENST00000523441 SLC28A3Q9HAS3 691 aa14.08□□□□□ -0.16
SDCBP-211ENST00000523441 CXXC1Q9P0U4 656 aaPredicted RBP14.08□□□□□ -0.16
SDCBP-211ENST00000523441 TBX21Q9UL17 535 aa14.08□□□□□ -0.16
SDCBP-211ENST00000523441 FAM184BQ9ULE4 1060 aa14.08□□□□□ -0.16
SDCBP-211ENST00000523441 IPO8O15397 1037 aaKnown RBP14.07□□□□□ -0.16
SDCBP-211ENST00000523441 ASGR1P07306 291 aa14.07□□□□□ -0.16
SDCBP-211ENST00000523441 CT47B1P0C2W7 299 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms