RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 SNHG28P0DPA3 235 aa23.92■■□□□ 1.42
SQLE-206ENST00000523430 NLRP5P59047 1200 aa23.92■■□□□ 1.42
SQLE-206ENST00000523430 ATP2B2Q01814 1243 aa23.92■■□□□ 1.42
SQLE-206ENST00000523430 SNW1Q13573 536 aaKnown RBP23.92■■□□□ 1.42
SQLE-206ENST00000523430 CCDC73Q6ZRK6 1079 aa23.92■■□□□ 1.42
SQLE-206ENST00000523430 FOXP4Q8IVH2 680 aaPredicted RBP23.92■■□□□ 1.42
SQLE-206ENST00000523430 FUCA2Q9BTY2 467 aa23.92■■□□□ 1.42
SQLE-206ENST00000523430 TNMDQ9H2S6 317 aa23.92■■□□□ 1.42
SQLE-206ENST00000523430 VEZTQ9HBM0 779 aa23.92■■□□□ 1.42
SQLE-206ENST00000523430 HEATR3Q7Z4Q2 680 aa23.91■■□□□ 1.42
SQLE-206ENST00000523430 MTMR14Q8NCE2 650 aa23.91■■□□□ 1.42
SQLE-206ENST00000523430 ENGASEQ8NFI3 743 aa23.91■■□□□ 1.42
SQLE-206ENST00000523430 PCDHB6Q9Y5E3 794 aa23.91■■□□□ 1.42
SQLE-206ENST00000523430 PPP6R2O75170 966 aa23.9■■□□□ 1.42
SQLE-206ENST00000523430 FAM160A1Q05DH4 1040 aa23.9■■□□□ 1.42
SQLE-206ENST00000523430 MAP3K11Q16584 847 aa23.9■■□□□ 1.42
SQLE-206ENST00000523430 ZBED3Q96IU2 234 aaPredicted RBP23.9■■□□□ 1.42
SQLE-206ENST00000523430 A0A1B0GVL5 298 aa23.9■■□□□ 1.42
SQLE-206ENST00000523430 HOMER1Q86YM7 354 aa23.9■■□□□ 1.42
SQLE-206ENST00000523430 RNF214Q8ND24 703 aa23.9■■□□□ 1.42
SQLE-206ENST00000523430 UBA5Q9GZZ9 404 aa23.9■■□□□ 1.42
SQLE-206ENST00000523430 SH3GLB2Q9NR46 395 aa23.9■■□□□ 1.42
SQLE-206ENST00000523430 UTRNP46939 3433 aa23.89■■□□□ 1.42
SQLE-206ENST00000523430 STXBP3O00186 592 aa23.89■■□□□ 1.41
SQLE-206ENST00000523430 ATP2B1P20020 1258 aa23.89■■□□□ 1.41
SQLE-206ENST00000523430 RRP1BQ14684 758 aaKnown RBP23.89■■□□□ 1.41
SQLE-206ENST00000523430 ASPRV1Q53RT3 343 aa23.89■■□□□ 1.41
SQLE-206ENST00000523430 CDAN1Q8IWY9 1227 aa23.89■■□□□ 1.41
SQLE-206ENST00000523430 CKAP2LQ8IYA6 745 aa23.89■■□□□ 1.41
SQLE-206ENST00000523430 FAM151AQ8WW52 585 aa23.89■■□□□ 1.41
SQLE-206ENST00000523430 NDUFA8P51970 172 aa23.88■■□□□ 1.41
SQLE-206ENST00000523430 JAG1P78504 1218 aa23.88■■□□□ 1.41
SQLE-206ENST00000523430 SEPT2Q15019 361 aa23.88■■□□□ 1.41
SQLE-206ENST00000523430 NBPF9Q3BBW0 867 aa23.88■■□□□ 1.41
SQLE-206ENST00000523430 MYOZ2Q9NPC6 264 aa23.88■■□□□ 1.41
SQLE-206ENST00000523430 BARHL2Q9NY43 387 aa23.88■■□□□ 1.41
SQLE-206ENST00000523430 WNT10BO00744 389 aa23.87■■□□□ 1.41
SQLE-206ENST00000523430 WNT7AO00755 349 aa23.87■■□□□ 1.41
SQLE-206ENST00000523430 EEF2P13639 858 aaKnown RBP23.87■■□□□ 1.41
SQLE-206ENST00000523430 TNIP1Q15025 636 aa23.87■■□□□ 1.41
SQLE-206ENST00000523430 ABCB5Q2M3G0 1257 aa23.87■■□□□ 1.41
SQLE-206ENST00000523430 RBM43Q6ZSC3 357 aaKnown RBP23.87■■□□□ 1.41
SQLE-206ENST00000523430 FMR1NBQ8N0W7 255 aaPredicted RBP23.87■■□□□ 1.41
SQLE-206ENST00000523430 JMYQ8N9B5 988 aa23.87■■□□□ 1.41
SQLE-206ENST00000523430 GPCPD1Q9NPB8 672 aa23.87■■□□□ 1.41
SQLE-206ENST00000523430 ZNF543Q08ER8 600 aa23.87■■□□□ 1.41
SQLE-206ENST00000523430 TMEM179Q6ZVK1 233 aa23.87■■□□□ 1.41
SQLE-206ENST00000523430 RRP36Q96EU6 259 aaKnown RBP23.87■■□□□ 1.41
SQLE-206ENST00000523430 CLIC6Q96NY7 704 aa23.87■■□□□ 1.41
SQLE-206ENST00000523430 PIGSQ96S52 555 aa23.87■■□□□ 1.41
SQLE-206ENST00000523430 TMEM39BQ9GZU3 492 aa23.87■■□□□ 1.41
SQLE-206ENST00000523430 VAT1LQ9HCJ6 419 aa23.87■■□□□ 1.41
SQLE-206ENST00000523430 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.87■■□□□ 1.41
SQLE-206ENST00000523430 EGFRP00533 1210 aa23.86■■□□□ 1.41
SQLE-206ENST00000523430 CALML3P27482 149 aa23.86■■□□□ 1.41
SQLE-206ENST00000523430 SMARCA1P28370 1054 aa23.86■■□□□ 1.41
SQLE-206ENST00000523430 ICA1Q05084 483 aa23.86■■□□□ 1.41
SQLE-206ENST00000523430 PPP4R3BQ5MIZ7 849 aa23.86■■□□□ 1.41
SQLE-206ENST00000523430 SHC4Q6S5L8 630 aa23.86■■□□□ 1.41
SQLE-206ENST00000523430 RIOX1Q9H6W3 641 aa23.86■■□□□ 1.41
SQLE-206ENST00000523430 KANSL2Q9H9L4 492 aa23.86■■□□□ 1.41
SQLE-206ENST00000523430 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.86■■□□□ 1.41
SQLE-206ENST00000523430 PCDHA4Q9UN74 947 aa23.86■■□□□ 1.41
SQLE-206ENST00000523430 KINO60870 393 aaKnown RBP23.85■■□□□ 1.41
SQLE-206ENST00000523430 PIK3AP1Q6ZUJ8 805 aa23.85■■□□□ 1.41
SQLE-206ENST00000523430 SIAH1Q8IUQ4 282 aa23.85■■□□□ 1.41
SQLE-206ENST00000523430 BLIDQ8IZY5 108 aa23.85■■□□□ 1.41
SQLE-206ENST00000523430 CCDC148Q8NFR7 591 aa23.85■■□□□ 1.41
SQLE-206ENST00000523430 SEC63Q9UGP8 760 aaKnown RBP23.85■■□□□ 1.41
SQLE-206ENST00000523430 HERC5Q9UII4 1024 aaKnown RBP23.85■■□□□ 1.41
SQLE-206ENST00000523430 MYO1BO43795 1136 aa23.85■■□□□ 1.41
SQLE-206ENST00000523430 GH2P01242 217 aa23.85■■□□□ 1.41
SQLE-206ENST00000523430 PFKFB1P16118 471 aa23.85■■□□□ 1.41
SQLE-206ENST00000523430 CMA1P23946 247 aa23.85■■□□□ 1.41
SQLE-206ENST00000523430 CCDC96Q2M329 555 aa23.85■■□□□ 1.41
SQLE-206ENST00000523430 FKBP1CQ5VVH2 108 aa23.85■■□□□ 1.41
SQLE-206ENST00000523430 RASGRP4Q8TDF6 673 aa23.85■■□□□ 1.41
SQLE-206ENST00000523430 NYAP2Q9P242 653 aa23.85■■□□□ 1.41
SQLE-206ENST00000523430 MRVI1Q9Y6F6 885 aa23.85■■□□□ 1.41
SQLE-206ENST00000523430 ZNF280AP59817 542 aaPredicted RBP23.84■■□□□ 1.41
SQLE-206ENST00000523430 TTBK2Q6IQ55 1244 aa23.84■■□□□ 1.41
SQLE-206ENST00000523430 KCTD1Q719H9 257 aa23.84■■□□□ 1.41
SQLE-206ENST00000523430 FBXO2Q9UK22 296 aaPredicted RBP23.84■■□□□ 1.41
SQLE-206ENST00000523430 NOL7Q9UMY1 257 aaKnown RBP23.84■■□□□ 1.41
SQLE-206ENST00000523430 ZNF541Q9H0D2 1346 aa23.84■■□□□ 1.41
SQLE-206ENST00000523430 TRIM75PA6NK02 468 aa23.83■■□□□ 1.41
SQLE-206ENST00000523430 M0R2N6 131 aa23.83■■□□□ 1.41
SQLE-206ENST00000523430 FZD9O00144 591 aa23.83■■□□□ 1.41
SQLE-206ENST00000523430 RPS12P25398 132 aaKnown RBP23.83■■□□□ 1.41
SQLE-206ENST00000523430 GMPSP49915 693 aaPredicted RBP23.83■■□□□ 1.41
SQLE-206ENST00000523430 GRIN1Q05586 938 aa23.83■■□□□ 1.41
SQLE-206ENST00000523430 RBM26Q5T8P6 1007 aaKnown RBP23.83■■□□□ 1.41
SQLE-206ENST00000523430 KRI1Q8N9T8 703 aaKnown RBP23.83■■□□□ 1.41
SQLE-206ENST00000523430 MKL1Q969V6 931 aa23.83■■□□□ 1.41
SQLE-206ENST00000523430 SCAF8Q9UPN6 1271 aaKnown RBP23.83■■□□□ 1.41
SQLE-206ENST00000523430 CUTAO60888 179 aa23.83■■□□□ 1.4
SQLE-206ENST00000523430 NAPAP54920 295 aa23.83■■□□□ 1.4
SQLE-206ENST00000523430 FAM83AQ86UY5 434 aa23.83■■□□□ 1.4
SQLE-206ENST00000523430 DAGLBQ8NCG7 672 aa23.83■■□□□ 1.4
SQLE-206ENST00000523430 GJA3Q9Y6H8 435 aa23.83■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms