RNA–Protein interactions for RNA: ENST00000523339.1

NPM1-210, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 268 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-210ENST00000523339 ESYT1Q9BSJ8 1104 aa4.87□□□□□ -1.63
NPM1-210ENST00000523339 OXCT2Q9BYC2 517 aaPredicted RBP4.87□□□□□ -1.63
NPM1-210ENST00000523339 TMEM39BQ9GZU3 492 aa4.87□□□□□ -1.63
NPM1-210ENST00000523339 RUBCNLQ9H714 662 aa4.87□□□□□ -1.63
NPM1-210ENST00000523339 TDRD3Q9H7E2 651 aaKnown RBP4.87□□□□□ -1.63
NPM1-210ENST00000523339 GOPCQ9HD26 462 aa4.87□□□□□ -1.63
NPM1-210ENST00000523339 PAK6Q9NQU5 681 aaPredicted RBP4.87□□□□□ -1.63
NPM1-210ENST00000523339 ZNF70Q9UC06 446 aaPredicted RBP4.87□□□□□ -1.63
NPM1-210ENST00000523339 PCDHAC2Q9Y5I4 1007 aa4.87□□□□□ -1.63
NPM1-210ENST00000523339 SSC5DA1L4H1 1573 aa4.87□□□□□ -1.63
NPM1-210ENST00000523339 BNIP3LO60238 219 aa4.86□□□□□ -1.63
NPM1-210ENST00000523339 FRAT2O75474 233 aaPredicted RBP4.86□□□□□ -1.63
NPM1-210ENST00000523339 FURINP09958 794 aa4.86□□□□□ -1.63
NPM1-210ENST00000523339 IGFBP4P22692 258 aa4.86□□□□□ -1.63
NPM1-210ENST00000523339 MSX1P28360 303 aa4.86□□□□□ -1.63
NPM1-210ENST00000523339 IRF5Q13568 498 aa4.86□□□□□ -1.63
NPM1-210ENST00000523339 PDE3AQ14432 1141 aa4.86□□□□□ -1.63
NPM1-210ENST00000523339 CCDC85BQ15834 202 aaPredicted RBP4.86□□□□□ -1.63
NPM1-210ENST00000523339 C4orf17Q53FE4 359 aa4.86□□□□□ -1.63
NPM1-210ENST00000523339 TMEM31Q5JXX7 168 aa4.86□□□□□ -1.63
NPM1-210ENST00000523339 PHTF2Q8N3S3 785 aa4.86□□□□□ -1.63
NPM1-210ENST00000523339 EDARADDQ8WWZ3 215 aa4.86□□□□□ -1.63
NPM1-210ENST00000523339 PCMTD1Q96MG8 357 aaPredicted RBP4.86□□□□□ -1.63
NPM1-210ENST00000523339 TRERF1Q96PN7 1200 aa4.86□□□□□ -1.63
NPM1-210ENST00000523339 ASB2Q96Q27 587 aa4.86□□□□□ -1.63
NPM1-210ENST00000523339 MYD88Q99836 296 aa4.86□□□□□ -1.63
NPM1-210ENST00000523339 PNNQ9H307 717 aaKnown RBP4.86□□□□□ -1.63
NPM1-210ENST00000523339 PICK1Q9NRD5 415 aa4.86□□□□□ -1.63
NPM1-210ENST00000523339 NDFIP2Q9NV92 336 aa4.86□□□□□ -1.63
NPM1-210ENST00000523339 BSDC1Q9NW68 430 aaPredicted RBP4.86□□□□□ -1.63
NPM1-210ENST00000523339 CWC25Q9NXE8 425 aaPredicted RBP4.86□□□□□ -1.63
NPM1-210ENST00000523339 CHPF2Q9P2E5 772 aa4.86□□□□□ -1.63
NPM1-210ENST00000523339 MINPP1Q9UNW1 487 aa4.86□□□□□ -1.63
NPM1-210ENST00000523339 TTF2Q9UNY4 1162 aaKnown RBP4.86□□□□□ -1.63
NPM1-210ENST00000523339 SNCAIPQ9Y6H5 919 aa4.86□□□□□ -1.63
NPM1-210ENST00000523339 NUP98P52948 1817 aa4.86□□□□□ -1.63
NPM1-210ENST00000523339 CTSWP56202 376 aa4.85□□□□□ -1.63
NPM1-210ENST00000523339 SMAD3P84022 425 aaKnown RBP4.85□□□□□ -1.63
NPM1-210ENST00000523339 AAK1Q2M2I8 961 aa4.85□□□□□ -1.63
NPM1-210ENST00000523339 RNF20Q5VTR2 975 aa4.85□□□□□ -1.63
NPM1-210ENST00000523339 CCDC129Q6ZRS4 1044 aa4.85□□□□□ -1.63
NPM1-210ENST00000523339 MIGA2Q7L4E1 593 aa4.85□□□□□ -1.63
NPM1-210ENST00000523339 FASTKD5Q7L8L6 764 aaKnown RBP4.85□□□□□ -1.63
NPM1-210ENST00000523339 CYP2U1Q7Z449 544 aa4.85□□□□□ -1.63
NPM1-210ENST00000523339 TXNRD3Q86VQ6 643 aa4.85□□□□□ -1.63
NPM1-210ENST00000523339 VPS37DQ86XT2 251 aa4.85□□□□□ -1.63
NPM1-210ENST00000523339 MICALL1Q8N3F8 863 aa4.85□□□□□ -1.63
NPM1-210ENST00000523339 ANKRD13CQ8N6S4 541 aa4.85□□□□□ -1.63
NPM1-210ENST00000523339 ZBED3Q96IU2 234 aaPredicted RBP4.85□□□□□ -1.63
NPM1-210ENST00000523339 RNPC3Q96LT9 517 aaKnown RBP4.85□□□□□ -1.63
NPM1-210ENST00000523339 UIMC1Q96RL1 719 aa4.85□□□□□ -1.63
NPM1-210ENST00000523339 P2RX7Q99572 595 aaKnown RBP4.85□□□□□ -1.63
NPM1-210ENST00000523339 ISCA1Q9BUE6 129 aa4.85□□□□□ -1.63
NPM1-210ENST00000523339 ZNF341Q9BYN7 854 aa4.85□□□□□ -1.63
NPM1-210ENST00000523339 SENP6Q9GZR1 1112 aaPredicted RBP4.85□□□□□ -1.63
NPM1-210ENST00000523339 CD209Q9NNX6 404 aa4.85□□□□□ -1.63
NPM1-210ENST00000523339 HYPKQ9NX55 129 aa4.85□□□□□ -1.63
NPM1-210ENST00000523339 DBF4Q9UBU7 674 aaPredicted RBP4.85□□□□□ -1.63
NPM1-210ENST00000523339 KLF15Q9UIH9 416 aa4.85□□□□□ -1.63
NPM1-210ENST00000523339 ATP11BQ9Y2G3 1177 aa4.85□□□□□ -1.63
NPM1-210ENST00000523339 CHMP3Q9Y3E7 222 aa4.85□□□□□ -1.63
NPM1-210ENST00000523339 SIPA1L3O60292 1781 aaPredicted RBP4.85□□□□□ -1.63
NPM1-210ENST00000523339 KDM3BQ7LBC6 1761 aa4.85□□□□□ -1.63
NPM1-210ENST00000523339 LAMB4A4D0S4 1761 aa4.84□□□□□ -1.63
NPM1-210ENST00000523339 LRRC37AA6NMS7 1700 aa4.84□□□□□ -1.63
NPM1-210ENST00000523339 SYNGAP1Q96PV0 1343 aa4.84□□□□□ -1.63
NPM1-210ENST00000523339 PLIN1O60240 522 aa4.84□□□□□ -1.63
NPM1-210ENST00000523339 DDX58O95786 925 aaKnown RBP4.84□□□□□ -1.63
NPM1-210ENST00000523339 PCCAP05165 728 aaPredicted RBP4.84□□□□□ -1.63
NPM1-210ENST00000523339 ZKSCAN1P17029 563 aaPredicted RBP4.84□□□□□ -1.63
NPM1-210ENST00000523339 KLRK1P26718 216 aa4.84□□□□□ -1.63
NPM1-210ENST00000523339 CNGA1P29973 690 aa4.84□□□□□ -1.63
NPM1-210ENST00000523339 CACNB3P54284 484 aa4.84□□□□□ -1.63
NPM1-210ENST00000523339 LMOD3Q0VAK6 560 aa4.84□□□□□ -1.63
NPM1-210ENST00000523339 NEXNQ0ZGT2 675 aa4.84□□□□□ -1.63
NPM1-210ENST00000523339 SHHQ15465 462 aa4.84□□□□□ -1.63
NPM1-210ENST00000523339 NFE2L2Q16236 605 aa4.84□□□□□ -1.63
NPM1-210ENST00000523339 LRRC26Q2I0M4 334 aa4.84□□□□□ -1.63
NPM1-210ENST00000523339 TAF7LQ5H9L4 462 aa4.84□□□□□ -1.63
NPM1-210ENST00000523339 MFSD14BQ5SR56 506 aa4.84□□□□□ -1.63
NPM1-210ENST00000523339 DZIP1LQ8IYY4 767 aaKnown RBP4.84□□□□□ -1.63
NPM1-210ENST00000523339 ABHD17AQ96GS6 310 aa4.84□□□□□ -1.63
NPM1-210ENST00000523339 BTBD6Q96KE9 485 aa4.84□□□□□ -1.63
NPM1-210ENST00000523339 ZSCAN10Q96SZ4 725 aaPredicted RBP4.84□□□□□ -1.63
NPM1-210ENST00000523339 KRTAP4-8Q9BYQ9 185 aa4.84□□□□□ -1.63
NPM1-210ENST00000523339 TTYH1Q9H313 450 aaPredicted RBP4.84□□□□□ -1.63
NPM1-210ENST00000523339 GREM2Q9H772 168 aa4.84□□□□□ -1.63
NPM1-210ENST00000523339 SERPINA10Q9UK55 444 aa4.84□□□□□ -1.63
NPM1-210ENST00000523339 ANKRD36CQ5JPF3 1778 aa4.83□□□□□ -1.64
NPM1-210ENST00000523339 CYP2B6P20813 491 aa4.83□□□□□ -1.64
NPM1-210ENST00000523339 INPP5BP32019 993 aa4.83□□□□□ -1.64
NPM1-210ENST00000523339 CRKP46108 304 aa4.83□□□□□ -1.64
NPM1-210ENST00000523339 MAP2K3P46734 347 aa4.83□□□□□ -1.64
NPM1-210ENST00000523339 MRE11P49959 708 aa4.83□□□□□ -1.64
NPM1-210ENST00000523339 GRIN2CQ14957 1233 aa4.83□□□□□ -1.64
NPM1-210ENST00000523339 LRP10Q7Z4F1 713 aa4.83□□□□□ -1.64
NPM1-210ENST00000523339 CERS5Q8N5B7 392 aa4.83□□□□□ -1.64
NPM1-210ENST00000523339 USP38Q8NB14 1042 aa4.83□□□□□ -1.64
NPM1-210ENST00000523339 CCDC191Q8NCU4 936 aa4.83□□□□□ -1.64
NPM1-210ENST00000523339 LRFN3Q9BTN0 628 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms