RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 IFIT1BQ5T764 474 aaKnown RBP13.98□□□□□ -0.17
PVT1-215ENST00000522963 SAMD1Q6SPF0 538 aaPredicted RBP13.98□□□□□ -0.17
PVT1-215ENST00000522963 BRF1Q92994 677 aa13.98□□□□□ -0.17
PVT1-215ENST00000522963 TMEM47Q9BQJ4 181 aa13.98□□□□□ -0.17
PVT1-215ENST00000522963 MCOLN1Q9GZU1 580 aa13.98□□□□□ -0.17
PVT1-215ENST00000522963 ASCC2Q9H1I8 757 aaPredicted RBP13.98□□□□□ -0.17
PVT1-215ENST00000522963 TSHZ2Q9NRE2 1034 aa13.98□□□□□ -0.17
PVT1-215ENST00000522963 STX8Q9UNK0 236 aa13.98□□□□□ -0.17
PVT1-215ENST00000522963 SLC45A1Q9Y2W3 748 aa13.98□□□□□ -0.17
PVT1-215ENST00000522963 TRIM17Q9Y577 477 aa13.98□□□□□ -0.17
PVT1-215ENST00000522963 CAPN15O75808 1086 aa13.97□□□□□ -0.17
PVT1-215ENST00000522963 CD2BP2O95400 341 aaKnown RBP13.97□□□□□ -0.17
PVT1-215ENST00000522963 LIFRP42702 1097 aa13.97□□□□□ -0.17
PVT1-215ENST00000522963 PPP4R3BQ5MIZ7 849 aa13.97□□□□□ -0.17
PVT1-215ENST00000522963 C17orf99Q6UX52 265 aa13.97□□□□□ -0.17
PVT1-215ENST00000522963 SPICE1Q8N0Z3 855 aa13.97□□□□□ -0.17
PVT1-215ENST00000522963 ANKRD13CQ8N6S4 541 aa13.97□□□□□ -0.17
PVT1-215ENST00000522963 MKL1Q969V6 931 aa13.97□□□□□ -0.17
PVT1-215ENST00000522963 LARP6Q9BRS8 491 aaKnown RBP13.97□□□□□ -0.17
PVT1-215ENST00000522963 KIAA1683Q9H0B3 1180 aa13.97□□□□□ -0.17
PVT1-215ENST00000522963 GREB1LQ9C091 1923 aaPredicted RBP13.96□□□□□ -0.17
PVT1-215ENST00000522963 MYH4Q9Y623 1939 aa13.96□□□□□ -0.17
PVT1-215ENST00000522963 ST18O60284 1047 aa13.96□□□□□ -0.17
PVT1-215ENST00000522963 TOP1P11387 765 aaKnown RBP13.96□□□□□ -0.17
PVT1-215ENST00000522963 VCAM1P19320 739 aa13.96□□□□□ -0.17
PVT1-215ENST00000522963 APOBRQ0VD83 1088 aa13.96□□□□□ -0.17
PVT1-215ENST00000522963 NFXL1Q6ZNB6 911 aa13.96□□□□□ -0.17
PVT1-215ENST00000522963 NOL8Q76FK4 1167 aaKnown RBP13.96□□□□□ -0.17
PVT1-215ENST00000522963 SGMS1Q86VZ5 419 aa13.96□□□□□ -0.17
PVT1-215ENST00000522963 LRRC47Q8N1G4 583 aaKnown RBP13.96□□□□□ -0.17
PVT1-215ENST00000522963 P2RX7Q99572 595 aaKnown RBP13.96□□□□□ -0.17
PVT1-215ENST00000522963 ARHGAP39Q9C0H5 1083 aa13.96□□□□□ -0.17
PVT1-215ENST00000522963 RPAP3Q9H6T3 665 aaPredicted RBP13.96□□□□□ -0.17
PVT1-215ENST00000522963 SH2D4AQ9H788 454 aa13.96□□□□□ -0.17
PVT1-215ENST00000522963 EFCC1Q9HA90 598 aa13.96□□□□□ -0.17
PVT1-215ENST00000522963 BRPF3Q9ULD4 1205 aa13.96□□□□□ -0.17
PVT1-215ENST00000522963 ZSWIM8A7E2V4 1837 aa13.96□□□□□ -0.17
PVT1-215ENST00000522963 ADGRA2Q96PE1 1338 aa13.95□□□□□ -0.18
PVT1-215ENST00000522963 CCDC69A6NI79 296 aa13.95□□□□□ -0.18
PVT1-215ENST00000522963 USP17L15C9J2P7 530 aa13.95□□□□□ -0.18
PVT1-215ENST00000522963 USP17L13C9JLJ4 530 aa13.95□□□□□ -0.18
PVT1-215ENST00000522963 USP17L11C9JVI0 530 aa13.95□□□□□ -0.18
PVT1-215ENST00000522963 USP17L18D6R9N7 530 aa13.95□□□□□ -0.18
PVT1-215ENST00000522963 USP17L22D6RA61 530 aa13.95□□□□□ -0.18
PVT1-215ENST00000522963 USP17L17D6RBQ6 530 aa13.95□□□□□ -0.18
PVT1-215ENST00000522963 USP17L19D6RCP7 530 aa13.95□□□□□ -0.18
PVT1-215ENST00000522963 USP17L20D6RJB6 530 aa13.95□□□□□ -0.18
PVT1-215ENST00000522963 FMNL1O95466 1100 aaPredicted RBP13.95□□□□□ -0.18
PVT1-215ENST00000522963 USP17L24Q0WX57 530 aa13.95□□□□□ -0.18
PVT1-215ENST00000522963 ANKRD1Q15327 319 aa13.95□□□□□ -0.18
PVT1-215ENST00000522963 OTOP1Q7RTM1 612 aa13.95□□□□□ -0.18
PVT1-215ENST00000522963 TMTC2Q8N394 836 aa13.95□□□□□ -0.18
PVT1-215ENST00000522963 IL27Q8NEV9 243 aa13.95□□□□□ -0.18
PVT1-215ENST00000522963 CHMP4CQ96CF2 233 aa13.95□□□□□ -0.18
PVT1-215ENST00000522963 PAGR1Q9BTK6 254 aa13.95□□□□□ -0.18
PVT1-215ENST00000522963 TANGO6Q9C0B7 1094 aa13.95□□□□□ -0.18
PVT1-215ENST00000522963 KAT14Q9H8E8 782 aa13.95□□□□□ -0.18
PVT1-215ENST00000522963 TPCN1Q9ULQ1 816 aa13.95□□□□□ -0.18
PVT1-215ENST00000522963 TMX2Q9Y320 296 aa13.95□□□□□ -0.18
PVT1-215ENST00000522963 KLF18A0A0U1RQI7 1052 aa13.94□□□□□ -0.18
PVT1-215ENST00000522963 PEX10O60683 326 aa13.94□□□□□ -0.18
PVT1-215ENST00000522963 BCRP11274 1271 aa13.94□□□□□ -0.18
PVT1-215ENST00000522963 HOXA7P31268 230 aaPredicted RBP13.94□□□□□ -0.18
PVT1-215ENST00000522963 PSMC4P43686 418 aa13.94□□□□□ -0.18
PVT1-215ENST00000522963 EVCP57679 992 aa13.94□□□□□ -0.18
PVT1-215ENST00000522963 LACTBP83111 547 aaPredicted RBP13.94□□□□□ -0.18
PVT1-215ENST00000522963 CAP1Q01518 475 aa13.94□□□□□ -0.18
PVT1-215ENST00000522963 ARHGEF6Q15052 776 aa13.94□□□□□ -0.18
PVT1-215ENST00000522963 KIAA1755Q5JYT7 1200 aa13.94□□□□□ -0.18
PVT1-215ENST00000522963 APOA5Q6Q788 366 aa13.94□□□□□ -0.18
PVT1-215ENST00000522963 RAB11FIP4Q86YS3 637 aa13.94□□□□□ -0.18
PVT1-215ENST00000522963 ZNF654Q8IZM8 581 aa13.94□□□□□ -0.18
PVT1-215ENST00000522963 PNMA1Q8ND90 353 aa13.94□□□□□ -0.18
PVT1-215ENST00000522963 C12orf42Q96LP6 360 aa13.94□□□□□ -0.18
PVT1-215ENST00000522963 MYL10Q9BUA6 226 aa13.94□□□□□ -0.18
PVT1-215ENST00000522963 VCPKMTQ9H867 229 aa13.94□□□□□ -0.18
PVT1-215ENST00000522963 GOPCQ9HD26 462 aa13.94□□□□□ -0.18
PVT1-215ENST00000522963 ISY1Q9ULR0 285 aaKnown RBP13.94□□□□□ -0.18
PVT1-215ENST00000522963 SLC12A7Q9Y666 1083 aa13.94□□□□□ -0.18
PVT1-215ENST00000522963 GCLCP48506 637 aaPredicted RBP13.93□□□□□ -0.18
PVT1-215ENST00000522963 HERVK_113P62684 666 aa13.93□□□□□ -0.18
PVT1-215ENST00000522963 CATSPERGQ6ZRH7 1159 aa13.93□□□□□ -0.18
PVT1-215ENST00000522963 RASGRP2Q7LDG7 609 aa13.93□□□□□ -0.18
PVT1-215ENST00000522963 CATIPQ7Z7H3 387 aa13.93□□□□□ -0.18
PVT1-215ENST00000522963 ABHD8Q96I13 439 aa13.93□□□□□ -0.18
PVT1-215ENST00000522963 SYNPO2Q9UMS6 1093 aa13.93□□□□□ -0.18
PVT1-215ENST00000522963 LIMCH1Q9UPQ0 1083 aa13.93□□□□□ -0.18
PVT1-215ENST00000522963 MTMR7Q9Y216 660 aa13.93□□□□□ -0.18
PVT1-215ENST00000522963 DOCK3Q8IZD9 2030 aa13.93□□□□□ -0.18
PVT1-215ENST00000522963 MGAMO43451 1857 aa13.93□□□□□ -0.18
PVT1-215ENST00000522963 CCDC85CA6NKD9 419 aa13.92□□□□□ -0.18
PVT1-215ENST00000522963 GOLGA8BA8MQT2 603 aa13.92□□□□□ -0.18
PVT1-215ENST00000522963 F5H6K3 240 aa13.92□□□□□ -0.18
PVT1-215ENST00000522963 DDAH1O94760 285 aa13.92□□□□□ -0.18
PVT1-215ENST00000522963 LARGE1O95461 756 aa13.92□□□□□ -0.18
PVT1-215ENST00000522963 NDUFB10O96000 172 aa13.92□□□□□ -0.18
PVT1-215ENST00000522963 RXRAP19793 462 aa13.92□□□□□ -0.18
PVT1-215ENST00000522963 PDIA3P30101 505 aaKnown RBP13.92□□□□□ -0.18
PVT1-215ENST00000522963 FCGRTP55899 365 aa13.92□□□□□ -0.18
PVT1-215ENST00000522963 KLRC3Q07444 240 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms