RNA–Protein interactions for RNA: ENST00000522928.1

CLVS1-209, Transcript of clavesin 1, humanhuman

TSL 2

Gene CLVS1, Length 464 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLVS1-209ENST00000522928 PRDM14Q9GZV8 571 aa6.22□□□□□ -1.41
CLVS1-209ENST00000522928 CARS2Q9HA77 564 aaKnown RBP6.22□□□□□ -1.41
CLVS1-209ENST00000522928 LMCD1Q9NZU5 365 aa6.22□□□□□ -1.41
CLVS1-209ENST00000522928 ZNF214Q9UL59 606 aaPredicted RBP6.22□□□□□ -1.41
CLVS1-209ENST00000522928 ZCCHC6Q5VYS8 1495 aaKnown RBP6.22□□□□□ -1.41
CLVS1-209ENST00000522928 CLEC3AO75596 197 aa6.21□□□□□ -1.42
CLVS1-209ENST00000522928 ITGB5P18084 799 aa6.21□□□□□ -1.42
CLVS1-209ENST00000522928 CASP7P55210 303 aa6.21□□□□□ -1.42
CLVS1-209ENST00000522928 ZP2Q05996 745 aa6.21□□□□□ -1.42
CLVS1-209ENST00000522928 C19orf47Q8N9M1 422 aaKnown RBP6.21□□□□□ -1.42
CLVS1-209ENST00000522928 SLC43A3Q8NBI5 491 aa6.21□□□□□ -1.42
CLVS1-209ENST00000522928 LRRN4CLQ8ND94 238 aa6.21□□□□□ -1.42
CLVS1-209ENST00000522928 SP110Q9HB58 689 aa6.21□□□□□ -1.42
CLVS1-209ENST00000522928 EBF1Q9UH73 591 aa6.21□□□□□ -1.42
CLVS1-209ENST00000522928 CBFA2T2O43439 604 aa6.2□□□□□ -1.42
CLVS1-209ENST00000522928 TPP2P29144 1249 aaPredicted RBP6.2□□□□□ -1.42
CLVS1-209ENST00000522928 ETFBP38117 255 aa6.2□□□□□ -1.42
CLVS1-209ENST00000522928 TXKP42681 527 aa6.2□□□□□ -1.42
CLVS1-209ENST00000522928 CTSKP43235 329 aa6.2□□□□□ -1.42
CLVS1-209ENST00000522928 PLCL1Q15111 1095 aa6.2□□□□□ -1.42
CLVS1-209ENST00000522928 ANGEL2Q5VTE6 544 aaKnown RBP6.2□□□□□ -1.42
CLVS1-209ENST00000522928 TDRD10Q5VZ19 366 aaKnown RBP6.2□□□□□ -1.42
CLVS1-209ENST00000522928 SLC23A3Q6PIS1 610 aa6.2□□□□□ -1.42
CLVS1-209ENST00000522928 USHBP1Q8N6Y0 703 aa6.2□□□□□ -1.42
CLVS1-209ENST00000522928 AGBL5Q8NDL9 886 aa6.2□□□□□ -1.42
CLVS1-209ENST00000522928 KLHL6Q8WZ60 621 aa6.2□□□□□ -1.42
CLVS1-209ENST00000522928 SUSD2Q9UGT4 822 aa6.2□□□□□ -1.42
CLVS1-209ENST00000522928 PCDHB10Q9UN67 800 aa6.2□□□□□ -1.42
CLVS1-209ENST00000522928 ERCC6Q03468 1493 aa6.2□□□□□ -1.42
CLVS1-209ENST00000522928 DNAJC25-GNG10A0A024R161 153 aa6.19□□□□□ -1.42
CLVS1-209ENST00000522928 PRAMEF1O95521 474 aa6.19□□□□□ -1.42
CLVS1-209ENST00000522928 CEBPAP49715 358 aaPredicted RBP6.19□□□□□ -1.42
CLVS1-209ENST00000522928 NMIQ13287 307 aaPredicted RBP6.19□□□□□ -1.42
CLVS1-209ENST00000522928 AUHQ13825 339 aaKnown RBP6.19□□□□□ -1.42
CLVS1-209ENST00000522928 RALGPS1Q5JS13 557 aa6.19□□□□□ -1.42
CLVS1-209ENST00000522928 DCAF15Q66K64 600 aa6.19□□□□□ -1.42
CLVS1-209ENST00000522928 TMPRSS7Q7RTY8 843 aa6.19□□□□□ -1.42
CLVS1-209ENST00000522928 ZNF513Q8N8E2 541 aaPredicted RBP6.19□□□□□ -1.42
CLVS1-209ENST00000522928 SYTL5Q8TDW5 730 aaPredicted RBP6.19□□□□□ -1.42
CLVS1-209ENST00000522928 KCNH3Q9ULD8 1083 aa6.19□□□□□ -1.42
CLVS1-209ENST00000522928 PCDHA11Q9Y5I1 949 aa6.19□□□□□ -1.42
CLVS1-209ENST00000522928 MRVI1Q9Y6F6 885 aa6.19□□□□□ -1.42
CLVS1-209ENST00000522928 PAPLNO95428 1278 aa6.18□□□□□ -1.42
CLVS1-209ENST00000522928 RNF4P78317 190 aa6.18□□□□□ -1.42
CLVS1-209ENST00000522928 ANKRD39Q53RE8 183 aa6.18□□□□□ -1.42
CLVS1-209ENST00000522928 KRTAP5-3Q6L8H2 238 aa6.18□□□□□ -1.42
CLVS1-209ENST00000522928 CREG2Q8IUH2 290 aa6.18□□□□□ -1.42
CLVS1-209ENST00000522928 OR6P1Q8NGX9 317 aa6.18□□□□□ -1.42
CLVS1-209ENST00000522928 PI4K2BQ8TCG2 481 aa6.18□□□□□ -1.42
CLVS1-209ENST00000522928 MICAL1Q8TDZ2 1067 aa6.18□□□□□ -1.42
CLVS1-209ENST00000522928 ANAPC16Q96DE5 110 aa6.18□□□□□ -1.42
CLVS1-209ENST00000522928 DHRS1Q96LJ7 313 aa6.18□□□□□ -1.42
CLVS1-209ENST00000522928 CRBNQ96SW2 442 aa6.18□□□□□ -1.42
CLVS1-209ENST00000522928 ADAMTS10Q9H324 1103 aa6.18□□□□□ -1.42
CLVS1-209ENST00000522928 GPATCH2Q9NW75 528 aa6.18□□□□□ -1.42
CLVS1-209ENST00000522928 CTNND2Q9UQB3 1225 aa6.18□□□□□ -1.42
CLVS1-209ENST00000522928 ZNF451Q9Y4E5 1061 aa6.18□□□□□ -1.42
CLVS1-209ENST00000522928 DCAF1Q9Y4B6 1507 aa6.18□□□□□ -1.42
CLVS1-209ENST00000522928 CARMIL2Q6F5E8 1435 aa6.17□□□□□ -1.42
CLVS1-209ENST00000522928 CUX2O14529 1486 aa6.17□□□□□ -1.42
CLVS1-209ENST00000522928 TMEM82A0PJX8 343 aa6.17□□□□□ -1.42
CLVS1-209ENST00000522928 SMAD7O15105 426 aaKnown RBP6.17□□□□□ -1.42
CLVS1-209ENST00000522928 SIGLEC6O43699 453 aa6.17□□□□□ -1.42
CLVS1-209ENST00000522928 EFEMP2O95967 443 aa6.17□□□□□ -1.42
CLVS1-209ENST00000522928 TP53P04637 393 aaPredicted RBP6.17□□□□□ -1.42
CLVS1-209ENST00000522928 TAL1P17542 331 aaPredicted RBP6.17□□□□□ -1.42
CLVS1-209ENST00000522928 ZNF445P59923 1031 aa6.17□□□□□ -1.42
CLVS1-209ENST00000522928 TEKQ02763 1124 aa6.17□□□□□ -1.42
CLVS1-209ENST00000522928 FYB2Q5VWT5 728 aa6.17□□□□□ -1.42
CLVS1-209ENST00000522928 C7orf61Q8IZ16 206 aa6.17□□□□□ -1.42
CLVS1-209ENST00000522928 DAGLBQ8NCG7 672 aa6.17□□□□□ -1.42
CLVS1-209ENST00000522928 ENOX1Q8TC92 643 aaKnown RBP6.17□□□□□ -1.42
CLVS1-209ENST00000522928 G6PC3Q9BUM1 346 aa6.17□□□□□ -1.42
CLVS1-209ENST00000522928 FAM86C1Q9NVL1 165 aa6.17□□□□□ -1.42
CLVS1-209ENST00000522928 GFOD1Q9NXC2 390 aa6.17□□□□□ -1.42
CLVS1-209ENST00000522928 DUSP13Q9UII6 198 aa6.17□□□□□ -1.42
CLVS1-209ENST00000522928 STRIP2Q9ULQ0 834 aa6.17□□□□□ -1.42
CLVS1-209ENST00000522928 NOTOA8MTQ0 251 aa6.16□□□□□ -1.42
CLVS1-209ENST00000522928 ARID5AQ03989 594 aa6.16□□□□□ -1.42
CLVS1-209ENST00000522928 BBS9Q3SYG4 887 aa6.16□□□□□ -1.42
CLVS1-209ENST00000522928 TCTN2Q96GX1 697 aa6.16□□□□□ -1.42
CLVS1-209ENST00000522928 KLHL25Q9H0H3 589 aa6.16□□□□□ -1.42
CLVS1-209ENST00000522928 TRIT1Q9H3H1 467 aaKnown RBP6.16□□□□□ -1.42
CLVS1-209ENST00000522928 ZNF408Q9H9D4 720 aa6.16□□□□□ -1.42
CLVS1-209ENST00000522928 PAX4O43316 350 aa6.15□□□□□ -1.42
CLVS1-209ENST00000522928 ERVFC1P60507 584 aa6.15□□□□□ -1.42
CLVS1-209ENST00000522928 EGR3Q06889 387 aa6.15□□□□□ -1.42
CLVS1-209ENST00000522928 NAALADL2Q58DX5 795 aa6.15□□□□□ -1.42
CLVS1-209ENST00000522928 ZNF655Q8N720 491 aaPredicted RBP6.15□□□□□ -1.42
CLVS1-209ENST00000522928 FLAD1Q8NFF5 587 aa6.15□□□□□ -1.42
CLVS1-209ENST00000522928 CPLX3Q8WVH0 158 aa6.15□□□□□ -1.42
CLVS1-209ENST00000522928 LINC01599Q8WXQ3 324 aa6.15□□□□□ -1.42
CLVS1-209ENST00000522928 ALPK1Q96QP1 1244 aa6.15□□□□□ -1.42
CLVS1-209ENST00000522928 MKRN2Q9H000 416 aaKnown RBP6.15□□□□□ -1.42
CLVS1-209ENST00000522928 RC3H2Q9HBD1 1191 aaKnown RBP6.15□□□□□ -1.42
CLVS1-209ENST00000522928 GP6Q9HCN6 339 aa6.15□□□□□ -1.42
CLVS1-209ENST00000522928 ZGLP1P0C6A0 271 aa6.14□□□□□ -1.43
CLVS1-209ENST00000522928 CD247P20963 164 aa6.14□□□□□ -1.43
CLVS1-209ENST00000522928 DNAJA1P31689 397 aaKnown RBP6.14□□□□□ -1.43
CLVS1-209ENST00000522928 IRAK1P51617 712 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms