RNA–Protein interactions for RNA: ENST00000522719.2

NKX2-1-204, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 1,417 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-204ENST00000522719 GNAQP50148 359 aa29.91■■■□□ 2.38
NKX2-1-204ENST00000522719 ZNF157P51786 506 aaPredicted RBP29.91■■■□□ 2.38
NKX2-1-204ENST00000522719 HMGCS2P54868 508 aa29.91■■■□□ 2.38
NKX2-1-204ENST00000522719 PRRT2Q7Z6L0 340 aaPredicted RBP29.91■■■□□ 2.38
NKX2-1-204ENST00000522719 PALM3A6NDB9 673 aaPredicted RBP29.9■■■□□ 2.38
NKX2-1-204ENST00000522719 WDR46O15213 610 aaKnown RBP29.9■■■□□ 2.38
NKX2-1-204ENST00000522719 CCT2P78371 535 aaKnown RBP29.9■■■□□ 2.38
NKX2-1-204ENST00000522719 ZNF543Q08ER8 600 aa29.9■■■□□ 2.38
NKX2-1-204ENST00000522719 SCRN1Q12765 414 aa29.9■■■□□ 2.38
NKX2-1-204ENST00000522719 SNAPC2Q13487 334 aa29.9■■■□□ 2.38
NKX2-1-204ENST00000522719 KIAA1755Q5JYT7 1200 aa29.9■■■□□ 2.38
NKX2-1-204ENST00000522719 CCDC144CPQ8IYA2 1237 aa29.9■■■□□ 2.38
NKX2-1-204ENST00000522719 SPICE1Q8N0Z3 855 aa29.9■■■□□ 2.38
NKX2-1-204ENST00000522719 MAD2L2Q9UI95 211 aa29.9■■■□□ 2.38
NKX2-1-204ENST00000522719 BMP3P12645 472 aa29.89■■■□□ 2.38
NKX2-1-204ENST00000522719 PROCA1Q8NCQ7 364 aaPredicted RBP29.89■■■□□ 2.38
NKX2-1-204ENST00000522719 FAM217BQ9NTX9 383 aaPredicted RBP29.89■■■□□ 2.38
NKX2-1-204ENST00000522719 GTF2A2P52657 109 aa29.88■■■□□ 2.37
NKX2-1-204ENST00000522719 CCDC96Q2M329 555 aa29.88■■■□□ 2.37
NKX2-1-204ENST00000522719 RASAL3Q86YV0 1011 aa29.88■■■□□ 2.37
NKX2-1-204ENST00000522719 NECAB1Q8N987 351 aa29.88■■■□□ 2.37
NKX2-1-204ENST00000522719 CCDC102AQ96A19 550 aa29.88■■■□□ 2.37
NKX2-1-204ENST00000522719 LZTS2Q9BRK4 669 aa29.88■■■□□ 2.37
NKX2-1-204ENST00000522719 VCAM1P19320 739 aa29.88■■■□□ 2.37
NKX2-1-204ENST00000522719 CDC27P30260 824 aa29.88■■■□□ 2.37
NKX2-1-204ENST00000522719 FASTKD5Q7L8L6 764 aaKnown RBP29.88■■■□□ 2.37
NKX2-1-204ENST00000522719 NCOA5Q9HCD5 579 aaKnown RBP29.88■■■□□ 2.37
NKX2-1-204ENST00000522719 CPLX1O14810 134 aa29.87■■■□□ 2.37
NKX2-1-204ENST00000522719 SMARCA1P28370 1054 aa29.87■■■□□ 2.37
NKX2-1-204ENST00000522719 ADD1P35611 737 aaKnown RBP29.87■■■□□ 2.37
NKX2-1-204ENST00000522719 CUL4AQ13619 759 aa29.87■■■□□ 2.37
NKX2-1-204ENST00000522719 CPLX2Q6PUV4 134 aaKnown RBP29.87■■■□□ 2.37
NKX2-1-204ENST00000522719 RASGRP2Q7LDG7 609 aa29.87■■■□□ 2.37
NKX2-1-204ENST00000522719 KLRF2D3W0D1 207 aa29.86■■■□□ 2.37
NKX2-1-204ENST00000522719 SLC10A3P09131 477 aa29.86■■■□□ 2.37
NKX2-1-204ENST00000522719 CETPP11597 493 aa29.86■■■□□ 2.37
NKX2-1-204ENST00000522719 FAM83BQ5T0W9 1011 aa29.86■■■□□ 2.37
NKX2-1-204ENST00000522719 TMTC3Q6ZXV5 915 aa29.86■■■□□ 2.37
NKX2-1-204ENST00000522719 KCTD1Q719H9 257 aa29.86■■■□□ 2.37
NKX2-1-204ENST00000522719 CCDC83Q8IWF9 413 aa29.86■■■□□ 2.37
NKX2-1-204ENST00000522719 STAG2Q8N3U4 1231 aa29.86■■■□□ 2.37
NKX2-1-204ENST00000522719 MYH6P13533 1939 aa29.85■■■□□ 2.37
NKX2-1-204ENST00000522719 FRMPD2Q68DX3 1309 aaPredicted RBP29.85■■■□□ 2.37
NKX2-1-204ENST00000522719 PLA2G6O60733 806 aa29.85■■■□□ 2.37
NKX2-1-204ENST00000522719 GOLGA8HP0CJ92 632 aa29.85■■■□□ 2.37
NKX2-1-204ENST00000522719 ST3GAL1Q11201 340 aa29.85■■■□□ 2.37
NKX2-1-204ENST00000522719 DGKZQ13574 1117 aa29.85■■■□□ 2.37
NKX2-1-204ENST00000522719 NUP88Q99567 741 aaPredicted RBP29.85■■■□□ 2.37
NKX2-1-204ENST00000522719 LLPHQ9BRT6 129 aaKnown RBP29.85■■■□□ 2.37
NKX2-1-204ENST00000522719 GPCPD1Q9NPB8 672 aa29.85■■■□□ 2.37
NKX2-1-204ENST00000522719 BAZ2BQ9UIF8 2168 aaKnown RBP29.84■■■□□ 2.37
NKX2-1-204ENST00000522719 PARP14Q460N5 1801 aa29.84■■■□□ 2.37
NKX2-1-204ENST00000522719 CDKL5O76039 1030 aa29.84■■■□□ 2.37
NKX2-1-204ENST00000522719 MS4A4AQ96JQ5 239 aa29.84■■■□□ 2.37
NKX2-1-204ENST00000522719 ISY1Q9ULR0 285 aaKnown RBP29.84■■■□□ 2.37
NKX2-1-204ENST00000522719 RASSF10A6NK89 507 aa29.83■■■□□ 2.37
NKX2-1-204ENST00000522719 TMEM232C9JQI7 657 aa29.83■■■□□ 2.37
NKX2-1-204ENST00000522719 IFNAR1P17181 557 aa29.83■■■□□ 2.37
NKX2-1-204ENST00000522719 NTRK3Q16288 839 aa29.83■■■□□ 2.37
NKX2-1-204ENST00000522719 BTNL9Q6UXG8 535 aa29.83■■■□□ 2.37
NKX2-1-204ENST00000522719 GADL1Q6ZQY3 521 aa29.83■■■□□ 2.37
NKX2-1-204ENST00000522719 CHURC1Q8WUH1 139 aa29.83■■■□□ 2.37
NKX2-1-204ENST00000522719 INTS4Q96HW7 963 aaKnown RBP29.83■■■□□ 2.37
NKX2-1-204ENST00000522719 RPAP3Q9H6T3 665 aaPredicted RBP29.83■■■□□ 2.37
NKX2-1-204ENST00000522719 FEM1BQ9UK73 627 aa29.83■■■□□ 2.37
NKX2-1-204ENST00000522719 STAT2P52630 851 aa29.82■■■□□ 2.36
NKX2-1-204ENST00000522719 FAM160B2Q86V87 743 aa29.82■■■□□ 2.36
NKX2-1-204ENST00000522719 SPZ1Q9BXG8 430 aa29.82■■■□□ 2.36
NKX2-1-204ENST00000522719 ZSCAN21Q9Y5A6 473 aaPredicted RBP29.82■■■□□ 2.36
NKX2-1-204ENST00000522719 FAM155AB1AL88 458 aaPredicted RBP29.81■■■□□ 2.36
NKX2-1-204ENST00000522719 USP17L15C9J2P7 530 aa29.81■■■□□ 2.36
NKX2-1-204ENST00000522719 USP17L13C9JLJ4 530 aa29.81■■■□□ 2.36
NKX2-1-204ENST00000522719 USP17L11C9JVI0 530 aa29.81■■■□□ 2.36
NKX2-1-204ENST00000522719 USP17L18D6R9N7 530 aa29.81■■■□□ 2.36
NKX2-1-204ENST00000522719 USP17L22D6RA61 530 aa29.81■■■□□ 2.36
NKX2-1-204ENST00000522719 USP17L17D6RBQ6 530 aa29.81■■■□□ 2.36
NKX2-1-204ENST00000522719 USP17L19D6RCP7 530 aa29.81■■■□□ 2.36
NKX2-1-204ENST00000522719 USP17L20D6RJB6 530 aa29.81■■■□□ 2.36
NKX2-1-204ENST00000522719 PLEKHA8P1O95397 391 aa29.81■■■□□ 2.36
NKX2-1-204ENST00000522719 USP17L24Q0WX57 530 aa29.81■■■□□ 2.36
NKX2-1-204ENST00000522719 MKRN3Q13064 507 aaKnown RBP29.81■■■□□ 2.36
NKX2-1-204ENST00000522719 MOGSQ13724 837 aa29.81■■■□□ 2.36
NKX2-1-204ENST00000522719 DEFB115Q30KQ5 88 aa29.81■■■□□ 2.36
NKX2-1-204ENST00000522719 SRBD1Q8N5C6 995 aaKnown RBP29.81■■■□□ 2.36
NKX2-1-204ENST00000522719 TANGO6Q9C0B7 1094 aa29.81■■■□□ 2.36
NKX2-1-204ENST00000522719 AGTPBP1Q9UPW5 1226 aa29.81■■■□□ 2.36
NKX2-1-204ENST00000522719 MANSC4A6NHS7 340 aaPredicted RBP29.8■■■□□ 2.36
NKX2-1-204ENST00000522719 HOXA7P31268 230 aaPredicted RBP29.8■■■□□ 2.36
NKX2-1-204ENST00000522719 FUT2Q10981 343 aa29.8■■■□□ 2.36
NKX2-1-204ENST00000522719 PABPC4Q13310 644 aaKnown RBP eCLIP29.8■■■□□ 2.36
NKX2-1-204ENST00000522719 TTBK2Q6IQ55 1244 aa29.8■■■□□ 2.36
NKX2-1-204ENST00000522719 RLFQ13129 1914 aa29.8■■■□□ 2.36
NKX2-1-204ENST00000522719 CCL15-CCL14A0A0B4J2E2 113 aa29.79■■■□□ 2.36
NKX2-1-204ENST00000522719 TESPA1A2RU30 521 aaPredicted RBP29.79■■■□□ 2.36
NKX2-1-204ENST00000522719 CCL15Q16663 113 aa29.79■■■□□ 2.36
NKX2-1-204ENST00000522719 CATSPERGQ6ZRH7 1159 aa29.79■■■□□ 2.36
NKX2-1-204ENST00000522719 RIOX1Q9H6W3 641 aa29.79■■■□□ 2.36
NKX2-1-204ENST00000522719 CTDNEP1O95476 244 aa29.79■■■□□ 2.36
NKX2-1-204ENST00000522719 IKQ13123 557 aaPredicted RBP29.79■■■□□ 2.36
NKX2-1-204ENST00000522719 TREML2Q5T2D2 321 aa29.79■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms