RNA–Protein interactions for RNA: ENST00000522574.5

TNIP1-215, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 2

Gene TNIP1, Length 1,394 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-215ENST00000522574 PROCA1Q8NCQ7 364 aaPredicted RBP11.03□□□□□ -0.64
TNIP1-215ENST00000522574 CTCFLQ8NI51 663 aaPredicted RBP11.03□□□□□ -0.64
TNIP1-215ENST00000522574 NUP133Q8WUM0 1156 aa11.03□□□□□ -0.64
TNIP1-215ENST00000522574 ABHD8Q96I13 439 aa11.03□□□□□ -0.64
TNIP1-215ENST00000522574 MS4A4AQ96JQ5 239 aa11.03□□□□□ -0.64
TNIP1-215ENST00000522574 LZTS2Q9BRK4 669 aa11.03□□□□□ -0.64
TNIP1-215ENST00000522574 SLKQ9H2G2 1235 aaPredicted RBP11.03□□□□□ -0.64
TNIP1-215ENST00000522574 RBM28Q9NW13 759 aaKnown RBP11.03□□□□□ -0.64
TNIP1-215ENST00000522574 RBM19Q9Y4C8 960 aaKnown RBP11.03□□□□□ -0.64
TNIP1-215ENST00000522574 GREB1LQ9C091 1923 aaPredicted RBP11.02□□□□□ -0.65
TNIP1-215ENST00000522574 TESPA1A2RU30 521 aaPredicted RBP11.02□□□□□ -0.65
TNIP1-215ENST00000522574 GOLGA8BA8MQT2 603 aa11.02□□□□□ -0.65
TNIP1-215ENST00000522574 FAM155AB1AL88 458 aaPredicted RBP11.02□□□□□ -0.65
TNIP1-215ENST00000522574 WDR46O15213 610 aaKnown RBP11.02□□□□□ -0.65
TNIP1-215ENST00000522574 SLC10A3P09131 477 aa11.02□□□□□ -0.65
TNIP1-215ENST00000522574 BMP3P12645 472 aa11.02□□□□□ -0.65
TNIP1-215ENST00000522574 HOXA7P31268 230 aaPredicted RBP11.02□□□□□ -0.65
TNIP1-215ENST00000522574 METAP2P50579 478 aaKnown RBP eCLIP11.02□□□□□ -0.652e-9■■□□□ 11.5
TNIP1-215ENST00000522574 ZNF543Q08ER8 600 aa11.02□□□□□ -0.65
TNIP1-215ENST00000522574 RTN1Q16799 776 aa11.02□□□□□ -0.65
TNIP1-215ENST00000522574 SPICE1Q8N0Z3 855 aa11.02□□□□□ -0.65
TNIP1-215ENST00000522574 CHURC1Q8WUH1 139 aa11.02□□□□□ -0.65
TNIP1-215ENST00000522574 TMX3Q96JJ7 454 aa11.02□□□□□ -0.65
TNIP1-215ENST00000522574 MYL10Q9BUA6 226 aa11.02□□□□□ -0.65
TNIP1-215ENST00000522574 FAM217BQ9NTX9 383 aaPredicted RBP11.02□□□□□ -0.65
TNIP1-215ENST00000522574 MAD2L2Q9UI95 211 aa11.02□□□□□ -0.65
TNIP1-215ENST00000522574 NAP1L2Q9ULW6 460 aaPredicted RBP11.02□□□□□ -0.65
TNIP1-215ENST00000522574 TRPM7Q96QT4 1865 aa11.02□□□□□ -0.65
TNIP1-215ENST00000522574 MANSC4A6NHS7 340 aaPredicted RBP11.01□□□□□ -0.65
TNIP1-215ENST00000522574 GOLGA8AA7E2F4 631 aa11.01□□□□□ -0.65
TNIP1-215ENST00000522574 USP17L15C9J2P7 530 aa11.01□□□□□ -0.65
TNIP1-215ENST00000522574 USP17L13C9JLJ4 530 aa11.01□□□□□ -0.65
TNIP1-215ENST00000522574 USP17L11C9JVI0 530 aa11.01□□□□□ -0.65
TNIP1-215ENST00000522574 KLRF2D3W0D1 207 aa11.01□□□□□ -0.65
TNIP1-215ENST00000522574 USP17L18D6R9N7 530 aa11.01□□□□□ -0.65
TNIP1-215ENST00000522574 USP17L22D6RA61 530 aa11.01□□□□□ -0.65
TNIP1-215ENST00000522574 USP17L17D6RBQ6 530 aa11.01□□□□□ -0.65
TNIP1-215ENST00000522574 USP17L19D6RCP7 530 aa11.01□□□□□ -0.65
TNIP1-215ENST00000522574 USP17L20D6RJB6 530 aa11.01□□□□□ -0.65
TNIP1-215ENST00000522574 RAD21O60216 631 aa11.01□□□□□ -0.65
TNIP1-215ENST00000522574 VCAM1P19320 739 aa11.01□□□□□ -0.65
TNIP1-215ENST00000522574 ADD1P35611 737 aaKnown RBP11.01□□□□□ -0.65
TNIP1-215ENST00000522574 USP17L24Q0WX57 530 aa11.01□□□□□ -0.65
TNIP1-215ENST00000522574 PABPC4Q13310 644 aaKnown RBP eCLIP11.01□□□□□ -0.65
TNIP1-215ENST00000522574 MOGSQ13724 837 aa11.01□□□□□ -0.65
TNIP1-215ENST00000522574 ZYXQ15942 572 aaKnown RBP11.01□□□□□ -0.65
TNIP1-215ENST00000522574 BTNL9Q6UXG8 535 aa11.01□□□□□ -0.65
TNIP1-215ENST00000522574 MICU3Q86XE3 530 aa11.01□□□□□ -0.65
TNIP1-215ENST00000522574 HSCBQ8IWL3 235 aa11.01□□□□□ -0.65
TNIP1-215ENST00000522574 REM2Q8IYK8 340 aaPredicted RBP11.01□□□□□ -0.65
TNIP1-215ENST00000522574 WBP1LQ9NX94 342 aa11.01□□□□□ -0.65
TNIP1-215ENST00000522574 HOXC10Q9NYD6 342 aa11.01□□□□□ -0.65
TNIP1-215ENST00000522574 FEM1BQ9UK73 627 aa11.01□□□□□ -0.65
TNIP1-215ENST00000522574 SLC45A1Q9Y2W3 748 aa11.01□□□□□ -0.65
TNIP1-215ENST00000522574 NID2Q14112 1375 aa11.01□□□□□ -0.65
TNIP1-215ENST00000522574 TMEM232C9JQI7 657 aa11□□□□□ -0.65
TNIP1-215ENST00000522574 K7ELQ4 463 aaPredicted RBP11□□□□□ -0.65
TNIP1-215ENST00000522574 RXRAP19793 462 aa11□□□□□ -0.65
TNIP1-215ENST00000522574 CDC27P30260 824 aa11□□□□□ -0.65
TNIP1-215ENST00000522574 TM4SF4P48230 202 aa11□□□□□ -0.65
TNIP1-215ENST00000522574 CCT2P78371 535 aaKnown RBP11□□□□□ -0.65
TNIP1-215ENST00000522574 SCRN1Q12765 414 aa11□□□□□ -0.65
TNIP1-215ENST00000522574 STK3Q13188 491 aa11□□□□□ -0.65
TNIP1-215ENST00000522574 NOGQ13253 232 aa11□□□□□ -0.65
TNIP1-215ENST00000522574 CUL4AQ13619 759 aa11□□□□□ -0.65
TNIP1-215ENST00000522574 BECN1Q14457 450 aa11□□□□□ -0.65
TNIP1-215ENST00000522574 COG2Q14746 738 aa11□□□□□ -0.65
TNIP1-215ENST00000522574 CCDC96Q2M329 555 aa11□□□□□ -0.65
TNIP1-215ENST00000522574 FAM83BQ5T0W9 1011 aa11□□□□□ -0.65
TNIP1-215ENST00000522574 GPAT2Q6NUI2 795 aa11□□□□□ -0.65
TNIP1-215ENST00000522574 CPLX2Q6PUV4 134 aaKnown RBP11□□□□□ -0.65
TNIP1-215ENST00000522574 GADL1Q6ZQY3 521 aa11□□□□□ -0.65
TNIP1-215ENST00000522574 CATSPERGQ6ZRH7 1159 aa11□□□□□ -0.65
TNIP1-215ENST00000522574 NOL8Q76FK4 1167 aaKnown RBP11□□□□□ -0.65
TNIP1-215ENST00000522574 FAM160B2Q86V87 743 aa11□□□□□ -0.65
TNIP1-215ENST00000522574 STAG2Q8N3U4 1231 aa11□□□□□ -0.65
TNIP1-215ENST00000522574 NECAB1Q8N987 351 aa11□□□□□ -0.65
TNIP1-215ENST00000522574 PRPF38AQ8NAV1 312 aaKnown RBP11□□□□□ -0.65
TNIP1-215ENST00000522574 GTF3C6Q969F1 213 aa11□□□□□ -0.65
TNIP1-215ENST00000522574 NUP88Q99567 741 aaPredicted RBP11□□□□□ -0.65
TNIP1-215ENST00000522574 LLPHQ9BRT6 129 aaKnown RBP11□□□□□ -0.65
TNIP1-215ENST00000522574 RPAP3Q9H6T3 665 aaPredicted RBP11□□□□□ -0.65
TNIP1-215ENST00000522574 GPCPD1Q9NPB8 672 aa11□□□□□ -0.65
TNIP1-215ENST00000522574 AGTPBP1Q9UPW5 1226 aa11□□□□□ -0.65
TNIP1-215ENST00000522574 MTMR7Q9Y216 660 aa11□□□□□ -0.65
TNIP1-215ENST00000522574 DOCK1Q14185 1865 aa11□□□□□ -0.65
TNIP1-215ENST00000522574 MYH8P13535 1937 aa10.99□□□□□ -0.65
TNIP1-215ENST00000522574 CCL15-CCL14A0A0B4J2E2 113 aa10.99□□□□□ -0.65
TNIP1-215ENST00000522574 CDKL5O76039 1030 aa10.99□□□□□ -0.65
TNIP1-215ENST00000522574 LARGE1O95461 756 aa10.99□□□□□ -0.65
TNIP1-215ENST00000522574 GOLGA8HP0CJ92 632 aa10.99□□□□□ -0.65
TNIP1-215ENST00000522574 FDX1P10109 184 aa10.99□□□□□ -0.65
TNIP1-215ENST00000522574 IFNAR1P17181 557 aa10.99□□□□□ -0.65
TNIP1-215ENST00000522574 ANP32AP39687 249 aaKnown RBP10.99□□□□□ -0.65
TNIP1-215ENST00000522574 STAT2P52630 851 aa10.99□□□□□ -0.65
TNIP1-215ENST00000522574 FUT2Q10981 343 aa10.99□□□□□ -0.65
TNIP1-215ENST00000522574 NTRK3Q16288 839 aa10.99□□□□□ -0.65
TNIP1-215ENST00000522574 CCL15Q16663 113 aa10.99□□□□□ -0.65
TNIP1-215ENST00000522574 TTBK2Q6IQ55 1244 aa10.99□□□□□ -0.65
TNIP1-215ENST00000522574 CYP4F22Q6NT55 531 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms