RNA–Protein interactions for RNA: ENST00000522052.5

CTNNA1-233, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-233ENST00000522052 MAP7Q14244 749 aa6.94□□□□□ -1.3
CTNNA1-233ENST00000522052 CT47A1Q5JQC4 288 aaPredicted RBP6.94□□□□□ -1.3
CTNNA1-233ENST00000522052 LETMD1Q6P1Q0 360 aa6.94□□□□□ -1.3
CTNNA1-233ENST00000522052 POMZP3Q6PJE2 187 aa6.94□□□□□ -1.3
CTNNA1-233ENST00000522052 FERMT3Q86UX7 667 aa6.94□□□□□ -1.3
CTNNA1-233ENST00000522052 TRIM59Q8IWR1 403 aa6.94□□□□□ -1.3
CTNNA1-233ENST00000522052 AGGF1Q8N302 714 aaeCLIP6.94□□□□□ -1.3
CTNNA1-233ENST00000522052 ARHGEF39Q8N4T4 335 aa6.94□□□□□ -1.3
CTNNA1-233ENST00000522052 ASPNQ9BXN1 380 aa6.94□□□□□ -1.3
CTNNA1-233ENST00000522052 MAGEC2Q9UBF1 373 aaPredicted RBP6.94□□□□□ -1.3
CTNNA1-233ENST00000522052 FAM229AH3BQW9 127 aa6.93□□□□□ -1.3
CTNNA1-233ENST00000522052 PIK3R2O00459 728 aa6.93□□□□□ -1.3
CTNNA1-233ENST00000522052 GNB5O14775 395 aa6.93□□□□□ -1.3
CTNNA1-233ENST00000522052 TBX1O43435 398 aa6.93□□□□□ -1.3
CTNNA1-233ENST00000522052 SDSP20132 328 aa6.93□□□□□ -1.3
CTNNA1-233ENST00000522052 GMPRP36959 345 aa6.93□□□□□ -1.3
CTNNA1-233ENST00000522052 ETV3P41162 512 aa6.93□□□□□ -1.3
CTNNA1-233ENST00000522052 SNRPNP63162 240 aaKnown RBP6.93□□□□□ -1.3
CTNNA1-233ENST00000522052 NFKB2Q00653 900 aa6.93□□□□□ -1.3
CTNNA1-233ENST00000522052 TRIM61Q5EBN2 209 aa6.93□□□□□ -1.3
CTNNA1-233ENST00000522052 DDX42Q86XP3 938 aaKnown RBP eCLIP6.93□□□□□ -1.3
CTNNA1-233ENST00000522052 RNF141Q8WVD5 230 aa6.93□□□□□ -1.3
CTNNA1-233ENST00000522052 FBXL18Q96ME1 805 aa6.93□□□□□ -1.3
CTNNA1-233ENST00000522052 MIPEPQ99797 713 aa6.93□□□□□ -1.3
CTNNA1-233ENST00000522052 IER2Q9BTL4 223 aa6.93□□□□□ -1.3
CTNNA1-233ENST00000522052 TARS2Q9BW92 718 aaKnown RBP6.93□□□□□ -1.3
CTNNA1-233ENST00000522052 SFMBT1Q9UHJ3 866 aa6.93□□□□□ -1.3
CTNNA1-233ENST00000522052 MCM8Q9UJA3 840 aa6.93□□□□□ -1.3
CTNNA1-233ENST00000522052 PCDHB12Q9Y5F1 795 aa6.93□□□□□ -1.3
CTNNA1-233ENST00000522052 SLITRK5O94991 958 aa6.92□□□□□ -1.3
CTNNA1-233ENST00000522052 RAB6AP20340 208 aa6.92□□□□□ -1.3
CTNNA1-233ENST00000522052 PREPP48147 710 aa6.92□□□□□ -1.3
CTNNA1-233ENST00000522052 EVA1CP58658 441 aa6.92□□□□□ -1.3
CTNNA1-233ENST00000522052 NBPF9Q3BBW0 867 aa6.92□□□□□ -1.3
CTNNA1-233ENST00000522052 PRRT3Q5FWE3 981 aa6.92□□□□□ -1.3
CTNNA1-233ENST00000522052 CCDC181Q5TID7 509 aa6.92□□□□□ -1.3
CTNNA1-233ENST00000522052 ZNF385CQ66K41 422 aaPredicted RBP6.92□□□□□ -1.3
CTNNA1-233ENST00000522052 CDH24Q86UP0 819 aa6.92□□□□□ -1.3
CTNNA1-233ENST00000522052 LRRTM3Q86VH5 581 aa6.92□□□□□ -1.3
CTNNA1-233ENST00000522052 UBR7Q8N806 425 aa6.92□□□□□ -1.3
CTNNA1-233ENST00000522052 ADCY4Q8NFM4 1077 aa6.92□□□□□ -1.3
CTNNA1-233ENST00000522052 BTN2A2Q8WVV5 523 aa6.92□□□□□ -1.3
CTNNA1-233ENST00000522052 CGGBP1Q9UFW8 167 aaPredicted RBP6.92□□□□□ -1.3
CTNNA1-233ENST00000522052 FBXL21Q9UKT6 434 aa6.92□□□□□ -1.3
CTNNA1-233ENST00000522052 FHOD1Q9Y613 1164 aa6.92□□□□□ -1.3
CTNNA1-233ENST00000522052 SART1O43290 800 aaKnown RBP6.91□□□□□ -1.3
CTNNA1-233ENST00000522052 DLX3O60479 287 aa6.91□□□□□ -1.3
CTNNA1-233ENST00000522052 C6orf222P0C671 652 aaPredicted RBP6.91□□□□□ -1.3
CTNNA1-233ENST00000522052 USP11P51784 963 aa6.91□□□□□ -1.3
CTNNA1-233ENST00000522052 ZNF445P59923 1031 aa6.91□□□□□ -1.3
CTNNA1-233ENST00000522052 CNNM4Q6P4Q7 775 aa6.91□□□□□ -1.3
CTNNA1-233ENST00000522052 AFAP1L2Q8N4X5 818 aa6.91□□□□□ -1.3
CTNNA1-233ENST00000522052 RIN3Q8TB24 985 aa6.91□□□□□ -1.3
CTNNA1-233ENST00000522052 SYTL5Q8TDW5 730 aaPredicted RBP6.91□□□□□ -1.3
CTNNA1-233ENST00000522052 DDX1Q92499 740 aaKnown RBP6.91□□□□□ -1.3
CTNNA1-233ENST00000522052 PSMG3-AS1Q96PY0 264 aa6.91□□□□□ -1.3
CTNNA1-233ENST00000522052 CEP89Q96ST8 783 aa6.91□□□□□ -1.3
CTNNA1-233ENST00000522052 CEP41Q9BYV8 373 aa6.91□□□□□ -1.3
CTNNA1-233ENST00000522052 AKTIPQ9H8T0 292 aa6.91□□□□□ -1.3
CTNNA1-233ENST00000522052 TRIM39Q9HCM9 518 aa6.91□□□□□ -1.3
CTNNA1-233ENST00000522052 PRR13Q9NZ81 148 aa6.91□□□□□ -1.3
CTNNA1-233ENST00000522052 CHPF2Q9P2E5 772 aa6.91□□□□□ -1.3
CTNNA1-233ENST00000522052 G3BP2Q9UN86 482 aaKnown RBP6.91□□□□□ -1.3
CTNNA1-233ENST00000522052 DIS3Q9Y2L1 958 aaKnown RBP6.91□□□□□ -1.3
CTNNA1-233ENST00000522052 DAGLAQ9Y4D2 1042 aa6.91□□□□□ -1.3
CTNNA1-233ENST00000522052 ALG1L2C9J202 215 aa6.9□□□□□ -1.3
CTNNA1-233ENST00000522052 GAS2O43903 313 aaKnown RBP6.9□□□□□ -1.3
CTNNA1-233ENST00000522052 EFCAB14O75071 495 aa6.9□□□□□ -1.3
CTNNA1-233ENST00000522052 DNAJC8O75937 253 aaPredicted RBP6.9□□□□□ -1.3
CTNNA1-233ENST00000522052 ALX3O95076 343 aa6.9□□□□□ -1.3
CTNNA1-233ENST00000522052 KCNH1O95259 989 aa6.9□□□□□ -1.3
CTNNA1-233ENST00000522052 PMLP29590 882 aa6.9□□□□□ -1.3
CTNNA1-233ENST00000522052 GABREP78334 506 aa6.9□□□□□ -1.3
CTNNA1-233ENST00000522052 EXOSC10Q01780 885 aaKnown RBP6.9□□□□□ -1.3
CTNNA1-233ENST00000522052 MAP4K2Q12851 820 aa6.9□□□□□ -1.3
CTNNA1-233ENST00000522052 GRB10Q13322 594 aa6.9□□□□□ -1.3
CTNNA1-233ENST00000522052 BRDTQ58F21 947 aaPredicted RBP6.9□□□□□ -1.3
CTNNA1-233ENST00000522052 ODR4Q5SWX8 454 aa6.9□□□□□ -1.3
CTNNA1-233ENST00000522052 NOL9Q5SY16 702 aaKnown RBP6.9□□□□□ -1.3
CTNNA1-233ENST00000522052 LCE2CQ5TA81 110 aa6.9□□□□□ -1.3
CTNNA1-233ENST00000522052 GTF2IRD2BQ6EKJ0 949 aa6.9□□□□□ -1.3
CTNNA1-233ENST00000522052 CDPF1Q6NVV7 123 aa6.9□□□□□ -1.3
CTNNA1-233ENST00000522052 SHISA2Q6UWI4 295 aa6.9□□□□□ -1.3
CTNNA1-233ENST00000522052 Q6ZS46 218 aa6.9□□□□□ -1.3
CTNNA1-233ENST00000522052 GTF2IRD2Q86UP8 949 aa6.9□□□□□ -1.3
CTNNA1-233ENST00000522052 PPM1KQ8N3J5 372 aa6.9□□□□□ -1.3
CTNNA1-233ENST00000522052 SVOPQ8N4V2 548 aa6.9□□□□□ -1.3
CTNNA1-233ENST00000522052 GSTCDQ8NEC7 633 aa6.9□□□□□ -1.3
CTNNA1-233ENST00000522052 SLC7A14Q8TBB6 771 aa6.9□□□□□ -1.3
CTNNA1-233ENST00000522052 EZH1Q92800 747 aaPredicted RBP6.9□□□□□ -1.3
CTNNA1-233ENST00000522052 CCDC140Q96MF4 163 aa6.9□□□□□ -1.3
CTNNA1-233ENST00000522052 YIPF2Q9BWQ6 316 aa6.9□□□□□ -1.3
CTNNA1-233ENST00000522052 PRDM14Q9GZV8 571 aa6.9□□□□□ -1.3
CTNNA1-233ENST00000522052 SEMA6CQ9H3T2 930 aa6.9□□□□□ -1.3
CTNNA1-233ENST00000522052 PRDM10Q9NQV6 1147 aa6.9□□□□□ -1.3
CTNNA1-233ENST00000522052 MKL2Q9ULH7 1088 aa6.9□□□□□ -1.3
CTNNA1-233ENST00000522052 NFICP08651 508 aa6.89□□□□□ -1.31
CTNNA1-233ENST00000522052 HOXC12P31275 282 aa6.89□□□□□ -1.31
CTNNA1-233ENST00000522052 GFRA1P56159 465 aa6.89□□□□□ -1.31
CTNNA1-233ENST00000522052 WWC2Q6AWC2 1192 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms