RNA–Protein interactions for RNA: ENST00000521977.1

SHPRH-209, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 927 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-209ENST00000521977 SNHG28P0DPA3 235 aa11.07□□□□□ -0.64
SHPRH-209ENST00000521977 LMOD1P29536 600 aaPredicted RBP11.07□□□□□ -0.64
SHPRH-209ENST00000521977 KIF5BP33176 963 aa11.07□□□□□ -0.64
SHPRH-209ENST00000521977 JAG1P78504 1218 aa11.07□□□□□ -0.64
SHPRH-209ENST00000521977 SSRP1Q08945 709 aaKnown RBP11.07□□□□□ -0.64
SHPRH-209ENST00000521977 ABCB5Q2M3G0 1257 aa11.07□□□□□ -0.64
SHPRH-209ENST00000521977 SHROOM1Q2M3G4 852 aaPredicted RBP11.07□□□□□ -0.64
SHPRH-209ENST00000521977 VARS2Q5ST30 1063 aaKnown RBP11.07□□□□□ -0.64
SHPRH-209ENST00000521977 ANGEL2Q5VTE6 544 aaKnown RBP11.07□□□□□ -0.64
SHPRH-209ENST00000521977 CDC37L1Q7L3B6 337 aa11.07□□□□□ -0.64
SHPRH-209ENST00000521977 SIAH1Q8IUQ4 282 aa11.07□□□□□ -0.64
SHPRH-209ENST00000521977 ZNF687Q8N1G0 1237 aa11.07□□□□□ -0.64
SHPRH-209ENST00000521977 SRBD1Q8N5C6 995 aaKnown RBP11.07□□□□□ -0.64
SHPRH-209ENST00000521977 CTCFLQ8NI51 663 aaPredicted RBP11.07□□□□□ -0.64
SHPRH-209ENST00000521977 TMC2Q8TDI7 906 aa11.07□□□□□ -0.64
SHPRH-209ENST00000521977 PHKBQ93100 1093 aa11.07□□□□□ -0.64
SHPRH-209ENST00000521977 RNF26Q9BY78 433 aaPredicted RBP11.07□□□□□ -0.64
SHPRH-209ENST00000521977 DEFB129Q9H1M3 183 aa11.07□□□□□ -0.64
SHPRH-209ENST00000521977 KANSL2Q9H9L4 492 aa11.07□□□□□ -0.64
SHPRH-209ENST00000521977 CLIP2Q9UDT6 1046 aa11.07□□□□□ -0.64
SHPRH-209ENST00000521977 PPP2R3BQ9Y5P8 575 aa11.07□□□□□ -0.64
SHPRH-209ENST00000521977 CNTNAP5Q8WYK1 1306 aa11.07□□□□□ -0.64
SHPRH-209ENST00000521977 MYH4Q9Y623 1939 aa11.06□□□□□ -0.64
SHPRH-209ENST00000521977 VPS37CA5D8V6 355 aaPredicted RBP11.06□□□□□ -0.64
SHPRH-209ENST00000521977 GLTPD2A6NH11 291 aa11.06□□□□□ -0.64
SHPRH-209ENST00000521977 PHF20L1A8MW92 1017 aa11.06□□□□□ -0.64
SHPRH-209ENST00000521977 MPHOSPH10O00566 681 aaKnown RBP11.06□□□□□ -0.64
SHPRH-209ENST00000521977 PRPF3O43395 683 aaKnown RBP11.06□□□□□ -0.64
SHPRH-209ENST00000521977 PPFIA3O75145 1194 aa11.06□□□□□ -0.64
SHPRH-209ENST00000521977 PPP1R37O75864 691 aa11.06□□□□□ -0.64
SHPRH-209ENST00000521977 GDF11O95390 407 aa11.06□□□□□ -0.64
SHPRH-209ENST00000521977 BAG4O95429 457 aaKnown RBP11.06□□□□□ -0.64
SHPRH-209ENST00000521977 MCM4P33991 863 aa11.06□□□□□ -0.64
SHPRH-209ENST00000521977 GNAQP50148 359 aa11.06□□□□□ -0.64
SHPRH-209ENST00000521977 SEPT2Q15019 361 aa11.06□□□□□ -0.64
SHPRH-209ENST00000521977 ARSIQ5FYB1 569 aa11.06□□□□□ -0.64
SHPRH-209ENST00000521977 CLEC10AQ8IUN9 316 aa11.06□□□□□ -0.64
SHPRH-209ENST00000521977 FBXO18Q8NFZ0 1043 aa11.06□□□□□ -0.64
SHPRH-209ENST00000521977 WASF1Q92558 559 aa11.06□□□□□ -0.64
SHPRH-209ENST00000521977 GBP4Q96PP9 640 aa11.06□□□□□ -0.64
SHPRH-209ENST00000521977 SLC26A6Q9BXS9 759 aa11.06□□□□□ -0.64
SHPRH-209ENST00000521977 GGA3Q9NZ52 723 aa11.06□□□□□ -0.64
SHPRH-209ENST00000521977 SYNPO2Q9UMS6 1093 aa11.06□□□□□ -0.64
SHPRH-209ENST00000521977 DEXIO95424 95 aa11.05□□□□□ -0.64
SHPRH-209ENST00000521977 GH2P01242 217 aa11.05□□□□□ -0.64
SHPRH-209ENST00000521977 PDHBP11177 359 aa11.05□□□□□ -0.64
SHPRH-209ENST00000521977 SMARCA1P28370 1054 aa11.05□□□□□ -0.64
SHPRH-209ENST00000521977 CAP2P40123 477 aa11.05□□□□□ -0.64
SHPRH-209ENST00000521977 RESTQ13127 1097 aa11.05□□□□□ -0.64
SHPRH-209ENST00000521977 PKN1Q16512 942 aa11.05□□□□□ -0.64
SHPRH-209ENST00000521977 USP50Q70EL3 339 aaPredicted RBP11.05□□□□□ -0.64
SHPRH-209ENST00000521977 TRIM22Q8IYM9 498 aa11.05□□□□□ -0.64
SHPRH-209ENST00000521977 CMTR1Q8N1G2 835 aaKnown RBP11.05□□□□□ -0.64
SHPRH-209ENST00000521977 STAG2Q8N3U4 1231 aa11.05□□□□□ -0.64
SHPRH-209ENST00000521977 C8orf76Q96K31 380 aa11.05□□□□□ -0.64
SHPRH-209ENST00000521977 WDR90Q96KV7 1748 aa11.05□□□□□ -0.64
SHPRH-209ENST00000521977 AIFM3Q96NN9 605 aa11.05□□□□□ -0.64
SHPRH-209ENST00000521977 LZTS2Q9BRK4 669 aa11.05□□□□□ -0.64
SHPRH-209ENST00000521977 ALG1Q9BT22 464 aa11.05□□□□□ -0.64
SHPRH-209ENST00000521977 CABP5Q9NP86 173 aa11.05□□□□□ -0.64
SHPRH-209ENST00000521977 GINM1Q9NU53 330 aa11.05□□□□□ -0.64
SHPRH-209ENST00000521977 ZBTB21Q9ULJ3 1066 aa11.05□□□□□ -0.64
SHPRH-209ENST00000521977 SCAF8Q9UPN6 1271 aaKnown RBP11.05□□□□□ -0.64
SHPRH-209ENST00000521977 SCN4AP35499 1836 aa11.05□□□□□ -0.64
SHPRH-209ENST00000521977 MYH6P13533 1939 aa11.04□□□□□ -0.64
SHPRH-209ENST00000521977 UBE2Q2LH0YL09 131 aa11.04□□□□□ -0.64
SHPRH-209ENST00000521977 H3BQV1 296 aa11.04□□□□□ -0.64
SHPRH-209ENST00000521977 GTPBP6O43824 516 aaPredicted RBP11.04□□□□□ -0.64
SHPRH-209ENST00000521977 EEF2P13639 858 aaKnown RBP11.04□□□□□ -0.64
SHPRH-209ENST00000521977 ICA1Q05084 483 aa11.04□□□□□ -0.64
SHPRH-209ENST00000521977 SLC35G1Q2M3R5 365 aa11.04□□□□□ -0.64
SHPRH-209ENST00000521977 ASPRV1Q53RT3 343 aa11.04□□□□□ -0.64
SHPRH-209ENST00000521977 NBPF12Q5TAG4 269 aaPredicted RBP11.04□□□□□ -0.64
SHPRH-209ENST00000521977 IFFO2Q5TF58 517 aa11.04□□□□□ -0.64
SHPRH-209ENST00000521977 FOXD4L5Q5VV16 416 aaPredicted RBP11.04□□□□□ -0.64
SHPRH-209ENST00000521977 MIGA2Q7L4E1 593 aa11.04□□□□□ -0.64
SHPRH-209ENST00000521977 LRRC47Q8N1G4 583 aaKnown RBP11.04□□□□□ -0.64
SHPRH-209ENST00000521977 FOXD4L4Q8WXT5 416 aaPredicted RBP11.04□□□□□ -0.64
SHPRH-209ENST00000521977 HOOK2Q96ED9 719 aa11.04□□□□□ -0.64
SHPRH-209ENST00000521977 SPZ1Q9BXG8 430 aa11.04□□□□□ -0.64
SHPRH-209ENST00000521977 ZSCAN16Q9H4T2 348 aaPredicted RBP11.04□□□□□ -0.64
SHPRH-209ENST00000521977 RBM27Q9P2N5 1060 aaKnown RBP11.04□□□□□ -0.64
SHPRH-209ENST00000521977 ZNF112Q9UJU3 913 aa11.04□□□□□ -0.64
SHPRH-209ENST00000521977 SSC5DA1L4H1 1573 aa11.03□□□□□ -0.64
SHPRH-209ENST00000521977 USP17L5A8MUK1 530 aa11.03□□□□□ -0.64
SHPRH-209ENST00000521977 POTECB2RU33 542 aa11.03□□□□□ -0.64
SHPRH-209ENST00000521977 KLRF2D3W0D1 207 aa11.03□□□□□ -0.64
SHPRH-209ENST00000521977 CYTH3O43739 400 aa11.03□□□□□ -0.64
SHPRH-209ENST00000521977 PARP1P09874 1014 aaKnown RBP11.03□□□□□ -0.64
SHPRH-209ENST00000521977 DCAF15Q66K64 600 aa11.03□□□□□ -0.64
SHPRH-209ENST00000521977 USP17L2Q6R6M4 530 aa11.03□□□□□ -0.64
SHPRH-209ENST00000521977 RASGRP2Q7LDG7 609 aa11.03□□□□□ -0.64
SHPRH-209ENST00000521977 CCDC82Q8N4S0 544 aa11.03□□□□□ -0.64
SHPRH-209ENST00000521977 GMCL1P1Q8NEA9 526 aa11.03□□□□□ -0.64
SHPRH-209ENST00000521977 ZC3H15Q8WU90 426 aaKnown RBP11.03□□□□□ -0.64
SHPRH-209ENST00000521977 DCAF4Q8WV16 495 aa11.03□□□□□ -0.64
SHPRH-209ENST00000521977 RIOX1Q9H6W3 641 aa11.03□□□□□ -0.64
SHPRH-209ENST00000521977 RYDENQ9NUL5 291 aaKnown RBP11.03□□□□□ -0.64
SHPRH-209ENST00000521977 ATP6V1DQ9Y5K8 247 aa11.03□□□□□ -0.64
SHPRH-209ENST00000521977 V9GY48 417 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms