RNA–Protein interactions for RNA: ENST00000521798.1

SPIDR-215, Transcript of scaffold protein involved in DNA repair, human

TSL 3

Gene SPIDR, Length 647 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-215	ENST00000521798	CORIN	Q9Y5Q5	1042 aa		9.38	□□□□□ -0.91
SPIDR-215	ENST00000521798	SNCAIP	Q9Y6H5	919 aa		9.38	□□□□□ -0.91
SPIDR-215	ENST00000521798	COL16A1	Q07092	1604 aa	Predicted RBP	9.38	□□□□□ -0.91
SPIDR-215	ENST00000521798	PHLPP1	O60346	1717 aa		9.37	□□□□□ -0.91
SPIDR-215	ENST00000521798	FMN2	Q9NZ56	1722 aa		9.37	□□□□□ -0.91
SPIDR-215	ENST00000521798	RALGAPB	Q86X10	1494 aa		9.37	□□□□□ -0.91
SPIDR-215	ENST00000521798	LOC102724159	A0A0B4J2E5	919 aa		9.37	□□□□□ -0.91
SPIDR-215	ENST00000521798	SIN3B	O75182	1162 aa		9.37	□□□□□ -0.91
SPIDR-215	ENST00000521798	SOX5	P35711	763 aa		9.37	□□□□□ -0.91
SPIDR-215	ENST00000521798	PABPC4	Q13310	644 aa	Known RBP eCLIP	9.37	□□□□□ -0.91
SPIDR-215	ENST00000521798	PWP2	Q15269	919 aa	Known RBP	9.37	□□□□□ -0.91
SPIDR-215	ENST00000521798	PERM1	Q5SV97	790 aa		9.37	□□□□□ -0.91
SPIDR-215	ENST00000521798	ZNF468	Q5VIY5	522 aa	Predicted RBP	9.37	□□□□□ -0.91
SPIDR-215	ENST00000521798	NLRC3	Q7RTR2	1065 aa		9.37	□□□□□ -0.91
SPIDR-215	ENST00000521798	GPBAR1	Q8TDU6	330 aa		9.37	□□□□□ -0.91
SPIDR-215	ENST00000521798	SOX17	Q9H6I2	414 aa	Predicted RBP	9.37	□□□□□ -0.91
SPIDR-215	ENST00000521798	GABBR1	Q9UBS5	961 aa		9.37	□□□□□ -0.91
SPIDR-215	ENST00000521798	SLC6A14	Q9UN76	642 aa		9.37	□□□□□ -0.91
SPIDR-215	ENST00000521798	TACC3	Q9Y6A5	838 aa		9.37	□□□□□ -0.91
SPIDR-215	ENST00000521798	NHSL1	Q5SYE7	1610 aa		9.37	□□□□□ -0.91
SPIDR-215	ENST00000521798	SLC22A31	A6NKX4	558 aa		9.36	□□□□□ -0.91
SPIDR-215	ENST00000521798	PML	P29590	882 aa		9.36	□□□□□ -0.91
SPIDR-215	ENST00000521798	CDCP2	Q5VXM1	449 aa		9.36	□□□□□ -0.91
SPIDR-215	ENST00000521798	KIAA1211L	Q6NV74	962 aa		9.36	□□□□□ -0.91
SPIDR-215	ENST00000521798	LRFN4	Q6PJG9	635 aa		9.36	□□□□□ -0.91
SPIDR-215	ENST00000521798	DDX42	Q86XP3	938 aa	Known RBP eCLIP	9.36	□□□□□ -0.91
SPIDR-215	ENST00000521798	KLHL6	Q8WZ60	621 aa		9.36	□□□□□ -0.91
SPIDR-215	ENST00000521798	GTPBP3	Q969Y2	492 aa	Known RBP	9.36	□□□□□ -0.91
SPIDR-215	ENST00000521798	PLPPR2	Q96GM1	343 aa		9.36	□□□□□ -0.91
SPIDR-215	ENST00000521798	ACSBG1	Q96GR2	724 aa		9.36	□□□□□ -0.91
SPIDR-215	ENST00000521798	SMG9	Q9H0W8	520 aa	Known RBP	9.36	□□□□□ -0.91
SPIDR-215	ENST00000521798	MYH16	Q9H6N6	1097 aa		9.36	□□□□□ -0.91
SPIDR-215	ENST00000521798	CNNM2	Q9H8M5	875 aa		9.36	□□□□□ -0.91
SPIDR-215	ENST00000521798	SH2B1	Q9NRF2	756 aa	Predicted RBP	9.36	□□□□□ -0.91
SPIDR-215	ENST00000521798	PLA2G2E	Q9NZK7	142 aa		9.36	□□□□□ -0.91
SPIDR-215	ENST00000521798	NAGPA	Q9UK23	515 aa		9.36	□□□□□ -0.91
SPIDR-215	ENST00000521798	CENPJ	Q9HC77	1338 aa	Predicted RBP	9.35	□□□□□ -0.91
SPIDR-215	ENST00000521798	ALG1L2	C9J202	215 aa		9.35	□□□□□ -0.91
SPIDR-215	ENST00000521798	SOX1	O00570	391 aa	Predicted RBP	9.35	□□□□□ -0.91
SPIDR-215	ENST00000521798	PDE8A	O60658	829 aa		9.35	□□□□□ -0.91
SPIDR-215	ENST00000521798	EPHA1	P21709	976 aa		9.35	□□□□□ -0.91
SPIDR-215	ENST00000521798	TBX4	P57082	545 aa		9.35	□□□□□ -0.91
SPIDR-215	ENST00000521798	CABP4	P57796	275 aa		9.35	□□□□□ -0.91
SPIDR-215	ENST00000521798	CTBS	Q01459	385 aa		9.35	□□□□□ -0.91
SPIDR-215	ENST00000521798	INPP5A	Q14642	412 aa		9.35	□□□□□ -0.91
SPIDR-215	ENST00000521798	ELMSAN1	Q6PJG2	1045 aa		9.35	□□□□□ -0.91
SPIDR-215	ENST00000521798	HDX	Q7Z353	690 aa		9.35	□□□□□ -0.91
SPIDR-215	ENST00000521798	ANKAR	Q7Z5J8	1434 aa		9.35	□□□□□ -0.91
SPIDR-215	ENST00000521798	CCDC155	Q8N6L0	562 aa		9.35	□□□□□ -0.91
SPIDR-215	ENST00000521798	TNFRSF25	Q93038	417 aa		9.35	□□□□□ -0.91
SPIDR-215	ENST00000521798	CCDC136	Q96JN2	1154 aa		9.35	□□□□□ -0.91
SPIDR-215	ENST00000521798	SLC9A7	Q96T83	725 aa		9.35	□□□□□ -0.91
SPIDR-215	ENST00000521798	KRT82	Q9NSB4	513 aa		9.35	□□□□□ -0.91
SPIDR-215	ENST00000521798	GEMIN8	Q9NWZ8	242 aa	Known RBP	9.35	□□□□□ -0.91
SPIDR-215	ENST00000521798	MCM8	Q9UJA3	840 aa		9.35	□□□□□ -0.91
SPIDR-215	ENST00000521798	PCDHB10	Q9UN67	800 aa		9.35	□□□□□ -0.91
SPIDR-215	ENST00000521798	TULP4	Q9NRJ4	1543 aa		9.35	□□□□□ -0.91
SPIDR-215	ENST00000521798	USP32	Q8NFA0	1604 aa		9.34	□□□□□ -0.91
SPIDR-215	ENST00000521798		H3BRJ5	948 aa		9.34	□□□□□ -0.91
SPIDR-215	ENST00000521798	DNAJA2	O60884	412 aa		9.34	□□□□□ -0.91
SPIDR-215	ENST00000521798	PLCG1	P19174	1290 aa		9.34	□□□□□ -0.91
SPIDR-215	ENST00000521798	CDC27	P30260	824 aa		9.34	□□□□□ -0.91
SPIDR-215	ENST00000521798	CBX2	Q14781	532 aa	Predicted RBP	9.34	□□□□□ -0.91
SPIDR-215	ENST00000521798	CT47A1	Q5JQC4	288 aa	Predicted RBP	9.34	□□□□□ -0.91
SPIDR-215	ENST00000521798	TMEM201	Q5SNT2	666 aa		9.34	□□□□□ -0.91
SPIDR-215	ENST00000521798	RNF180	Q86T96	592 aa		9.34	□□□□□ -0.91
SPIDR-215	ENST00000521798	CCDC146	Q8IYE0	955 aa		9.34	□□□□□ -0.91
SPIDR-215	ENST00000521798	KISS1R	Q969F8	398 aa	Predicted RBP	9.34	□□□□□ -0.91
SPIDR-215	ENST00000521798	C8orf48	Q96LL4	319 aa		9.34	□□□□□ -0.91
SPIDR-215	ENST00000521798	KIF2C	Q99661	725 aa		9.34	□□□□□ -0.91
SPIDR-215	ENST00000521798	LPIN3	Q9BQK8	851 aa		9.34	□□□□□ -0.91
SPIDR-215	ENST00000521798	CARD11	Q9BXL7	1154 aa		9.34	□□□□□ -0.91
SPIDR-215	ENST00000521798	NCOA5	Q9HCD5	579 aa	Known RBP	9.34	□□□□□ -0.91
SPIDR-215	ENST00000521798	FRRS1L	Q9P0K9	344 aa		9.34	□□□□□ -0.91
SPIDR-215	ENST00000521798	TCEAL9	Q9UHQ7	104 aa		9.34	□□□□□ -0.91
SPIDR-215	ENST00000521798	PDZRN3	Q9UPQ7	1066 aa		9.34	□□□□□ -0.91
SPIDR-215	ENST00000521798	JCAD	Q9P266	1359 aa		9.34	□□□□□ -0.91
SPIDR-215	ENST00000521798	SOBP	A7XYQ1	873 aa		9.33	□□□□□ -0.92
SPIDR-215	ENST00000521798	EIF4EBP3	O60516	100 aa	Predicted RBP	9.33	□□□□□ -0.92
SPIDR-215	ENST00000521798	NFKB2	Q00653	900 aa		9.33	□□□□□ -0.92
SPIDR-215	ENST00000521798	SLC7A5	Q01650	507 aa		9.33	□□□□□ -0.92
SPIDR-215	ENST00000521798	PDE4B	Q07343	736 aa		9.33	□□□□□ -0.92
SPIDR-215	ENST00000521798	CCAR1	Q8IX12	1150 aa	Known RBP	9.33	□□□□□ -0.92
SPIDR-215	ENST00000521798	EXOC2	Q96KP1	924 aa		9.33	□□□□□ -0.92
SPIDR-215	ENST00000521798	ZC3H12C	Q9C0D7	883 aa	Known RBP	9.33	□□□□□ -0.92
SPIDR-215	ENST00000521798	EIF3A	Q14152	1382 aa	Known RBP	9.33	□□□□□ -0.92
SPIDR-215	ENST00000521798	ATP7B	P35670	1465 aa		9.33	□□□□□ -0.92
SPIDR-215	ENST00000521798	PXDN	Q92626	1479 aa		9.33	□□□□□ -0.92
SPIDR-215	ENST00000521798	MED1	Q15648	1581 aa	Predicted RBP	9.33	□□□□□ -0.92
SPIDR-215	ENST00000521798	NPHP3	Q7Z494	1330 aa		9.32	□□□□□ -0.92
SPIDR-215	ENST00000521798	GSG1L2	A8MUP6	293 aa		9.32	□□□□□ -0.92
SPIDR-215	ENST00000521798	PLD2	O14939	933 aa		9.32	□□□□□ -0.92
SPIDR-215	ENST00000521798	PEX14	O75381	377 aa		9.32	□□□□□ -0.92
SPIDR-215	ENST00000521798	GSTM4	Q03013	218 aa		9.32	□□□□□ -0.92
SPIDR-215	ENST00000521798	FNDC3B	Q53EP0	1204 aa	Known RBP	9.32	□□□□□ -0.92
SPIDR-215	ENST00000521798	GORAB	Q5T7V8	394 aa		9.32	□□□□□ -0.92
SPIDR-215	ENST00000521798	FOXB2	Q5VYV0	432 aa		9.32	□□□□□ -0.92
SPIDR-215	ENST00000521798	CACTIN-AS1	Q8N1I8	211 aa		9.32	□□□□□ -0.92
SPIDR-215	ENST00000521798	LRRC59	Q96AG4	307 aa	Known RBP	9.32	□□□□□ -0.92
SPIDR-215	ENST00000521798	CDK19	Q9BWU1	502 aa		9.32	□□□□□ -0.92

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