RNA–Protein interactions for RNA: ENST00000521678.1

IGHV3-60-201, Transcript of immunoglobulin heavy variable 3-60 (pseudogene), humanhuman

BASIC

Gene IGHV3-60, Length 354 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-60-201ENST00000521678 C12orf60Q5U649 245 aa13.91□□□□□ -0.18
IGHV3-60-201ENST00000521678 CLEC10AQ8IUN9 316 aa13.91□□□□□ -0.18
IGHV3-60-201ENST00000521678 ITPRIPQ8IWB1 547 aa13.91□□□□□ -0.18
IGHV3-60-201ENST00000521678 FTSJ3Q8IY81 847 aaKnown RBP13.91□□□□□ -0.18
IGHV3-60-201ENST00000521678 SPICE1Q8N0Z3 855 aa13.91□□□□□ -0.18
IGHV3-60-201ENST00000521678 RHPN1Q8TCX5 695 aa13.91□□□□□ -0.18
IGHV3-60-201ENST00000521678 MYLIPQ8WY64 445 aa13.91□□□□□ -0.18
IGHV3-60-201ENST00000521678 TOX2Q96NM4 488 aa13.91□□□□□ -0.18
IGHV3-60-201ENST00000521678 SH2D4AQ9H788 454 aa13.91□□□□□ -0.18
IGHV3-60-201ENST00000521678 ARHGEF10LQ9HCE6 1279 aa13.91□□□□□ -0.18
IGHV3-60-201ENST00000521678 IL1RAPL2Q9NP60 686 aa13.91□□□□□ -0.18
IGHV3-60-201ENST00000521678 XPNPEP3Q9NQH7 507 aa13.91□□□□□ -0.18
IGHV3-60-201ENST00000521678 LTBP2Q14767 1821 aa13.91□□□□□ -0.18
IGHV3-60-201ENST00000521678 SMIM22K7EJ46 135 aa13.9□□□□□ -0.18
IGHV3-60-201ENST00000521678 PRKAB2O43741 272 aa13.9□□□□□ -0.18
IGHV3-60-201ENST00000521678 CLTBP09497 229 aa13.9□□□□□ -0.18
IGHV3-60-201ENST00000521678 RARBP10826 455 aa13.9□□□□□ -0.18
IGHV3-60-201ENST00000521678 TAL1P17542 331 aaPredicted RBP13.9□□□□□ -0.18
IGHV3-60-201ENST00000521678 CDK8P49336 464 aa13.9□□□□□ -0.18
IGHV3-60-201ENST00000521678 ICA1Q05084 483 aa13.9□□□□□ -0.18
IGHV3-60-201ENST00000521678 ANKRD33Q7Z3H0 272 aa13.9□□□□□ -0.18
IGHV3-60-201ENST00000521678 REPS2Q8NFH8 660 aa13.9□□□□□ -0.18
IGHV3-60-201ENST00000521678 TSEN34Q9BSV6 310 aaKnown RBP13.9□□□□□ -0.18
IGHV3-60-201ENST00000521678 ARMT1Q9H993 441 aa13.9□□□□□ -0.18
IGHV3-60-201ENST00000521678 ROBO3Q96MS0 1386 aa13.89□□□□□ -0.19
IGHV3-60-201ENST00000521678 GOLIM4O00461 696 aa13.89□□□□□ -0.19
IGHV3-60-201ENST00000521678 VWA5AO00534 786 aa13.89□□□□□ -0.19
IGHV3-60-201ENST00000521678 ADAMTS4O75173 837 aa13.89□□□□□ -0.19
IGHV3-60-201ENST00000521678 PGK1P00558 417 aa13.89□□□□□ -0.19
IGHV3-60-201ENST00000521678 MYCNP04198 464 aaPredicted RBP13.89□□□□□ -0.19
IGHV3-60-201ENST00000521678 PGK2P07205 417 aa13.89□□□□□ -0.19
IGHV3-60-201ENST00000521678 EEF2P13639 858 aaKnown RBP13.89□□□□□ -0.19
IGHV3-60-201ENST00000521678 STAT3P40763 770 aa13.89□□□□□ -0.19
IGHV3-60-201ENST00000521678 CCSAPQ6IQ19 270 aaPredicted RBP13.89□□□□□ -0.19
IGHV3-60-201ENST00000521678 RNF180Q86T96 592 aa13.89□□□□□ -0.19
IGHV3-60-201ENST00000521678 MMP19Q99542 508 aa13.89□□□□□ -0.19
IGHV3-60-201ENST00000521678 KANSL2Q9H9L4 492 aa13.89□□□□□ -0.19
IGHV3-60-201ENST00000521678 FBXO28Q9NVF7 368 aa13.89□□□□□ -0.19
IGHV3-60-201ENST00000521678 ZNF214Q9UL59 606 aaPredicted RBP13.89□□□□□ -0.19
IGHV3-60-201ENST00000521678 A0A0G2JMZ2 1700 aa13.89□□□□□ -0.19
IGHV3-60-201ENST00000521678 BDP1A6H8Y1 2624 aa13.89□□□□□ -0.19
IGHV3-60-201ENST00000521678 A0A1W2PQ45 241 aaPredicted RBP13.88□□□□□ -0.19
IGHV3-60-201ENST00000521678 A0A1W2PQY0 241 aa13.88□□□□□ -0.19
IGHV3-60-201ENST00000521678 USP17L12C9JPN9 530 aa13.88□□□□□ -0.19
IGHV3-60-201ENST00000521678 USP17L21D6R901 530 aa13.88□□□□□ -0.19
IGHV3-60-201ENST00000521678 ADD2P35612 726 aa13.88□□□□□ -0.19
IGHV3-60-201ENST00000521678 FAAP100Q0VG06 881 aa13.88□□□□□ -0.19
IGHV3-60-201ENST00000521678 KCTD2Q14681 263 aa13.88□□□□□ -0.19
IGHV3-60-201ENST00000521678 C16orf86Q6ZW13 317 aa13.88□□□□□ -0.19
IGHV3-60-201ENST00000521678 CLASRPQ8N2M8 674 aaKnown RBP13.88□□□□□ -0.19
IGHV3-60-201ENST00000521678 MSL3Q8N5Y2 521 aaKnown RBP13.88□□□□□ -0.19
IGHV3-60-201ENST00000521678 KLHDC9Q8NEP7 349 aa13.88□□□□□ -0.19
IGHV3-60-201ENST00000521678 KIF1BPQ96EK5 621 aa13.88□□□□□ -0.19
IGHV3-60-201ENST00000521678 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.88□□□□□ -0.19
IGHV3-60-201ENST00000521678 PRDM6Q9NQX0 595 aa13.88□□□□□ -0.19
IGHV3-60-201ENST00000521678 PPP1R9AQ9ULJ8 1098 aa13.88□□□□□ -0.19
IGHV3-60-201ENST00000521678 SMCHD1A6NHR9 2005 aa13.88□□□□□ -0.19
IGHV3-60-201ENST00000521678 DNAJC25-GNG10A0A024R161 153 aa13.87□□□□□ -0.19
IGHV3-60-201ENST00000521678 CYP2D7A0A087X1C5 515 aa13.87□□□□□ -0.19
IGHV3-60-201ENST00000521678 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.87□□□□□ -0.19
IGHV3-60-201ENST00000521678 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.87□□□□□ -0.19
IGHV3-60-201ENST00000521678 SNAI1O95863 264 aaPredicted RBP13.87□□□□□ -0.19
IGHV3-60-201ENST00000521678 AKR1A1P14550 325 aa13.87□□□□□ -0.19
IGHV3-60-201ENST00000521678 RAG1P15918 1043 aa13.87□□□□□ -0.19
IGHV3-60-201ENST00000521678 COPB2P35606 906 aa13.87□□□□□ -0.19
IGHV3-60-201ENST00000521678 SLFNL1Q499Z3 407 aa13.87□□□□□ -0.19
IGHV3-60-201ENST00000521678 MAMDC4Q6UXC1 1216 aa13.87□□□□□ -0.19
IGHV3-60-201ENST00000521678 SIRT2Q8IXJ6 389 aa13.87□□□□□ -0.19
IGHV3-60-201ENST00000521678 RNPC3Q96LT9 517 aaKnown RBP13.87□□□□□ -0.19
IGHV3-60-201ENST00000521678 TMEM39AQ9NV64 488 aa13.87□□□□□ -0.19
IGHV3-60-201ENST00000521678 MBD4O95243 580 aa13.86□□□□□ -0.19
IGHV3-60-201ENST00000521678 FOSL2P15408 326 aa13.86□□□□□ -0.19
IGHV3-60-201ENST00000521678 ATP5JP18859 108 aa13.86□□□□□ -0.19
IGHV3-60-201ENST00000521678 CDK7P50613 346 aa13.86□□□□□ -0.19
IGHV3-60-201ENST00000521678 ACLYP53396 1101 aa13.86□□□□□ -0.19
IGHV3-60-201ENST00000521678 FPGSQ05932 587 aa13.86□□□□□ -0.19
IGHV3-60-201ENST00000521678 GRIN2CQ14957 1233 aa13.86□□□□□ -0.19
IGHV3-60-201ENST00000521678 UBE3CQ15386 1083 aa13.86□□□□□ -0.19
IGHV3-60-201ENST00000521678 C16orf59Q7L2K0 433 aa13.86□□□□□ -0.19
IGHV3-60-201ENST00000521678 RPAP2Q8IXW5 612 aaPredicted RBP13.86□□□□□ -0.19
IGHV3-60-201ENST00000521678 SYMPKQ92797 1274 aaKnown RBP13.86□□□□□ -0.19
IGHV3-60-201ENST00000521678 DNAJC2Q99543 621 aaKnown RBP13.86□□□□□ -0.19
IGHV3-60-201ENST00000521678 PAG1Q9NWQ8 432 aa13.86□□□□□ -0.19
IGHV3-60-201ENST00000521678 TBX21Q9UL17 535 aa13.86□□□□□ -0.19
IGHV3-60-201ENST00000521678 ZBED9Q6R2W3 1325 aa13.86□□□□□ -0.19
IGHV3-60-201ENST00000521678 DCDC2CA8MYV0 355 aa13.85□□□□□ -0.19
IGHV3-60-201ENST00000521678 ATP2A1O14983 1001 aa13.85□□□□□ -0.19
IGHV3-60-201ENST00000521678 PQBP1O60828 265 aaKnown RBP13.85□□□□□ -0.19
IGHV3-60-201ENST00000521678 TIMP1P01033 207 aa13.85□□□□□ -0.19
IGHV3-60-201ENST00000521678 IFIT2P09913 472 aaKnown RBP13.85□□□□□ -0.19
IGHV3-60-201ENST00000521678 RASIP1Q5U651 963 aa13.85□□□□□ -0.19
IGHV3-60-201ENST00000521678 CTR9Q6PD62 1173 aa13.85□□□□□ -0.19
IGHV3-60-201ENST00000521678 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.85□□□□□ -0.19
IGHV3-60-201ENST00000521678 PANK1Q8TE04 598 aa13.85□□□□□ -0.19
IGHV3-60-201ENST00000521678 NUP133Q8WUM0 1156 aa13.85□□□□□ -0.19
IGHV3-60-201ENST00000521678 HAUS7Q99871 368 aa13.85□□□□□ -0.19
IGHV3-60-201ENST00000521678 GOPCQ9HD26 462 aa13.85□□□□□ -0.19
IGHV3-60-201ENST00000521678 FAM184BQ9ULE4 1060 aa13.85□□□□□ -0.19
IGHV3-60-201ENST00000521678 CNPY2Q9Y2B0 182 aa13.85□□□□□ -0.19
IGHV3-60-201ENST00000521678 RIPK3Q9Y572 518 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms