RNA–Protein interactions for RNA: ENST00000521661.5

IKBKB-220, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, human

TSL 5

Gene IKBKB, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IKBKB-220	ENST00000521661	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.55	□□□□□ -0.24
IKBKB-220	ENST00000521661	SRBD1	Q8N5C6	995 aa	Known RBP	13.55	□□□□□ -0.24
IKBKB-220	ENST00000521661	ERO1A	Q96HE7	468 aa		13.55	□□□□□ -0.24
IKBKB-220	ENST00000521661	TDRD3	Q9H7E2	651 aa	Known RBP	13.55	□□□□□ -0.24
IKBKB-220	ENST00000521661	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.55	□□□□□ -0.24
IKBKB-220	ENST00000521661	CLIC4	Q9Y696	253 aa		13.55	□□□□□ -0.24
IKBKB-220	ENST00000521661	EIF6	P56537	245 aa	Known RBP	13.55	□□□□□ -0.24
IKBKB-220	ENST00000521661	PPP2R5B	Q15173	497 aa		13.55	□□□□□ -0.24
IKBKB-220	ENST00000521661	CFAP100	Q494V2	611 aa		13.55	□□□□□ -0.24
IKBKB-220	ENST00000521661	MYSM1	Q5VVJ2	828 aa		13.55	□□□□□ -0.24
IKBKB-220	ENST00000521661	TMTC3	Q6ZXV5	915 aa		13.55	□□□□□ -0.24
IKBKB-220	ENST00000521661	RASGRP2	Q7LDG7	609 aa		13.55	□□□□□ -0.24
IKBKB-220	ENST00000521661	CREBRF	Q8IUR6	639 aa		13.55	□□□□□ -0.24
IKBKB-220	ENST00000521661	STAG2	Q8N3U4	1231 aa		13.55	□□□□□ -0.24
IKBKB-220	ENST00000521661	TMEM47	Q9BQJ4	181 aa		13.55	□□□□□ -0.24
IKBKB-220	ENST00000521661	RNF26	Q9BY78	433 aa	Predicted RBP	13.55	□□□□□ -0.24
IKBKB-220	ENST00000521661	VPS54	Q9P1Q0	977 aa		13.55	□□□□□ -0.24
IKBKB-220	ENST00000521661	FAM196B	A6NMK8	535 aa		13.54	□□□□□ -0.24
IKBKB-220	ENST00000521661	BTBD18	B2RXH4	712 aa		13.54	□□□□□ -0.24
IKBKB-220	ENST00000521661	FUT2	Q10981	343 aa		13.54	□□□□□ -0.24
IKBKB-220	ENST00000521661	ATL3	Q6DD88	541 aa		13.54	□□□□□ -0.24
IKBKB-220	ENST00000521661	BRAP	Q7Z569	592 aa		13.54	□□□□□ -0.24
IKBKB-220	ENST00000521661	CEP95	Q96GE4	821 aa		13.54	□□□□□ -0.24
IKBKB-220	ENST00000521661	SERPINB13	Q9UIV8	391 aa		13.54	□□□□□ -0.24
IKBKB-220	ENST00000521661	SERPINA10	Q9UK55	444 aa		13.54	□□□□□ -0.24
IKBKB-220	ENST00000521661	MPHOSPH10	O00566	681 aa	Known RBP	13.54	□□□□□ -0.24
IKBKB-220	ENST00000521661	HLA-DOA	P06340	250 aa		13.54	□□□□□ -0.24
IKBKB-220	ENST00000521661	VIL1	P09327	827 aa	Known RBP	13.54	□□□□□ -0.24
IKBKB-220	ENST00000521661	GOLGA8H	P0CJ92	632 aa		13.54	□□□□□ -0.24
IKBKB-220	ENST00000521661	SKIL	P12757	684 aa		13.54	□□□□□ -0.24
IKBKB-220	ENST00000521661	ME1	P48163	572 aa		13.54	□□□□□ -0.24
IKBKB-220	ENST00000521661	TERF2	Q15554	542 aa		13.54	□□□□□ -0.24
IKBKB-220	ENST00000521661	PKN1	Q16512	942 aa		13.54	□□□□□ -0.24
IKBKB-220	ENST00000521661	CIAPIN1	Q6FI81	312 aa		13.54	□□□□□ -0.24
IKBKB-220	ENST00000521661	CLEC10A	Q8IUN9	316 aa		13.54	□□□□□ -0.24
IKBKB-220	ENST00000521661	NEDD1	Q8NHV4	660 aa		13.54	□□□□□ -0.24
IKBKB-220	ENST00000521661	PRMT6	Q96LA8	375 aa	Predicted RBP	13.54	□□□□□ -0.24
IKBKB-220	ENST00000521661	TCP11L1	Q9NUJ3	509 aa		13.54	□□□□□ -0.24
IKBKB-220	ENST00000521661	RCOR1	Q9UKL0	485 aa		13.54	□□□□□ -0.24
IKBKB-220	ENST00000521661	MYH6	P13533	1939 aa		13.54	□□□□□ -0.24
IKBKB-220	ENST00000521661	DCAF8L1	A6NGE4	600 aa		13.53	□□□□□ -0.24
IKBKB-220	ENST00000521661	PRPF3	O43395	683 aa	Known RBP	13.53	□□□□□ -0.24
IKBKB-220	ENST00000521661	MMP1	P03956	469 aa		13.53	□□□□□ -0.24
IKBKB-220	ENST00000521661	AKR1B1	P15121	316 aa		13.53	□□□□□ -0.24
IKBKB-220	ENST00000521661	KIF5B	P33176	963 aa		13.53	□□□□□ -0.24
IKBKB-220	ENST00000521661	GSDMD	P57764	484 aa		13.53	□□□□□ -0.24
IKBKB-220	ENST00000521661	NAA30	Q147X3	362 aa	Predicted RBP	13.53	□□□□□ -0.24
IKBKB-220	ENST00000521661	STK38	Q15208	465 aa		13.53	□□□□□ -0.24
IKBKB-220	ENST00000521661	SAFB	Q15424	915 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
IKBKB-220	ENST00000521661	CCDC178	Q5BJE1	867 aa		13.53	□□□□□ -0.24
IKBKB-220	ENST00000521661	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.53	□□□□□ -0.24
IKBKB-220	ENST00000521661	DIS3L2	Q8IYB7	885 aa	Known RBP	13.53	□□□□□ -0.24
IKBKB-220	ENST00000521661	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
IKBKB-220	ENST00000521661	FAM198A	Q9UFP1	575 aa		13.53	□□□□□ -0.24
IKBKB-220	ENST00000521661	ZNF215	Q9UL58	517 aa	Predicted RBP	13.53	□□□□□ -0.24
IKBKB-220	ENST00000521661	CNTNAP5	Q8WYK1	1306 aa		13.53	□□□□□ -0.24
IKBKB-220	ENST00000521661	ZNF541	Q9H0D2	1346 aa		13.53	□□□□□ -0.24
IKBKB-220	ENST00000521661	BAZ2B	Q9UIF8	2168 aa	Known RBP	13.53	□□□□□ -0.24
IKBKB-220	ENST00000521661	DDTL	A6NHG4	134 aa	Predicted RBP	13.52	□□□□□ -0.24
IKBKB-220	ENST00000521661	CCZ1B	P86790	482 aa		13.52	□□□□□ -0.24
IKBKB-220	ENST00000521661	CCZ1	P86791	482 aa	Predicted RBP	13.52	□□□□□ -0.24
IKBKB-220	ENST00000521661	HDLBP	Q00341	1268 aa	Known RBP	13.52	□□□□□ -0.24
IKBKB-220	ENST00000521661	GABPA	Q06546	454 aa		13.52	□□□□□ -0.24
IKBKB-220	ENST00000521661	NR5A1	Q13285	461 aa		13.52	□□□□□ -0.24
IKBKB-220	ENST00000521661	TNIP1	Q15025	636 aa		13.52	□□□□□ -0.24
IKBKB-220	ENST00000521661	SF3A1	Q15459	793 aa	Known RBP	13.52	□□□□□ -0.24
IKBKB-220	ENST00000521661	KMT5B	Q4FZB7	885 aa		13.52	□□□□□ -0.24
IKBKB-220	ENST00000521661	OXER1	Q8TDS5	423 aa		13.52	□□□□□ -0.24
IKBKB-220	ENST00000521661	MRI	Q9BWK5	157 aa		13.52	□□□□□ -0.24
IKBKB-220	ENST00000521661	ANO10	Q9NW15	660 aa		13.52	□□□□□ -0.24
IKBKB-220	ENST00000521661	TUBB4A	P04350	444 aa		13.52	□□□□□ -0.25
IKBKB-220	ENST00000521661	DHX8	Q14562	1220 aa	Known RBP	13.52	□□□□□ -0.25
IKBKB-220	ENST00000521661	C11orf57	Q6ZUT1	292 aa	Predicted RBP	13.52	□□□□□ -0.25
IKBKB-220	ENST00000521661	CCAR2	Q8N163	923 aa	Known RBP	13.52	□□□□□ -0.25
IKBKB-220	ENST00000521661	ZNF592	Q92610	1267 aa		13.52	□□□□□ -0.25
IKBKB-220	ENST00000521661	ANKS1A	Q92625	1134 aa		13.52	□□□□□ -0.25
IKBKB-220	ENST00000521661	SHISA4	Q96DD7	197 aa		13.52	□□□□□ -0.25
IKBKB-220	ENST00000521661	CPVL	Q9H3G5	476 aa		13.52	□□□□□ -0.25
IKBKB-220	ENST00000521661	RTEL1	Q9NZ71	1219 aa		13.52	□□□□□ -0.25
IKBKB-220	ENST00000521661	IMPACT	Q9P2X3	320 aa		13.52	□□□□□ -0.25
IKBKB-220	ENST00000521661	MAD2L2	Q9UI95	211 aa		13.52	□□□□□ -0.25
IKBKB-220	ENST00000521661	CLRN2	A0PK11	232 aa		13.51	□□□□□ -0.25
IKBKB-220	ENST00000521661	CCDC66	A2RUB6	948 aa		13.51	□□□□□ -0.25
IKBKB-220	ENST00000521661	BECN2	A8MW95	431 aa		13.51	□□□□□ -0.25
IKBKB-220	ENST00000521661	SLU7	O95391	586 aa	Known RBP	13.51	□□□□□ -0.25
IKBKB-220	ENST00000521661	VEGFA	P15692	232 aa	Predicted RBP	13.51	□□□□□ -0.25
IKBKB-220	ENST00000521661	XBP1	P17861	261 aa		13.51	□□□□□ -0.25
IKBKB-220	ENST00000521661	SHMT1	P34896	483 aa		13.51	□□□□□ -0.25
IKBKB-220	ENST00000521661	ATP2B2	Q01814	1243 aa		13.51	□□□□□ -0.25
IKBKB-220	ENST00000521661	CCAR1	Q8IX12	1150 aa	Known RBP	13.51	□□□□□ -0.25
IKBKB-220	ENST00000521661	GML	Q99445	158 aa		13.51	□□□□□ -0.25
IKBKB-220	ENST00000521661	TRIM34	Q9BYJ4	488 aa		13.51	□□□□□ -0.25
IKBKB-220	ENST00000521661	MYH8	P13535	1937 aa		13.51	□□□□□ -0.25
IKBKB-220	ENST00000521661	USP27X	A6NNY8	438 aa		13.51	□□□□□ -0.25
IKBKB-220	ENST00000521661	TCP10L2	B9ZVM9	353 aa		13.51	□□□□□ -0.25
IKBKB-220	ENST00000521661	ATP2B1	P20020	1258 aa		13.51	□□□□□ -0.25
IKBKB-220	ENST00000521661	MARCKS	P29966	332 aa	Predicted RBP	13.51	□□□□□ -0.25
IKBKB-220	ENST00000521661	NT5C2	P49902	561 aa		13.51	□□□□□ -0.25
IKBKB-220	ENST00000521661	GRM4	Q14833	912 aa		13.51	□□□□□ -0.25
IKBKB-220	ENST00000521661	ANO1	Q5XXA6	986 aa		13.51	□□□□□ -0.25

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