RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 CHRNEQ04844 493 aa5.25□□□□□ -1.57
VPS13B-209ENST00000521559 COL9A2Q14055 689 aaPredicted RBP5.25□□□□□ -1.57
VPS13B-209ENST00000521559 MLANAQ16655 118 aa5.25□□□□□ -1.57
VPS13B-209ENST00000521559 NBPF9Q3BBW0 867 aa5.25□□□□□ -1.57
VPS13B-209ENST00000521559 RALGPS1Q5JS13 557 aa5.25□□□□□ -1.57
VPS13B-209ENST00000521559 FYB2Q5VWT5 728 aa5.25□□□□□ -1.57
VPS13B-209ENST00000521559 RNF111Q6ZNA4 994 aa5.25□□□□□ -1.57
VPS13B-209ENST00000521559 ZNF654Q8IZM8 581 aa5.25□□□□□ -1.57
VPS13B-209ENST00000521559 ZNF655Q8N720 491 aaPredicted RBP5.25□□□□□ -1.57
VPS13B-209ENST00000521559 BHLHE22Q8NFJ8 381 aaPredicted RBP5.25□□□□□ -1.57
VPS13B-209ENST00000521559 FERD3LQ96RJ6 166 aa5.25□□□□□ -1.57
VPS13B-209ENST00000521559 PCDHA11Q9Y5I1 949 aa5.25□□□□□ -1.57
VPS13B-209ENST00000521559 LAMC3Q9Y6N6 1575 aa5.25□□□□□ -1.57
VPS13B-209ENST00000521559 ZNF503-AS2A6NEH8 195 aa5.24□□□□□ -1.57
VPS13B-209ENST00000521559 ENDOUP21128 410 aaKnown RBP5.24□□□□□ -1.57
VPS13B-209ENST00000521559 ANKS4BQ8N8V4 417 aa5.24□□□□□ -1.57
VPS13B-209ENST00000521559 PPP1R16BQ96T49 567 aa5.24□□□□□ -1.57
VPS13B-209ENST00000521559 DDX41Q9UJV9 622 aaKnown RBP5.24□□□□□ -1.57
VPS13B-209ENST00000521559 ZNRF3Q9ULT6 936 aa5.24□□□□□ -1.57
VPS13B-209ENST00000521559 RECKO95980 971 aa5.23□□□□□ -1.57
VPS13B-209ENST00000521559 ZGLP1P0C6A0 271 aa5.23□□□□□ -1.57
VPS13B-209ENST00000521559 POLR2BP30876 1174 aaKnown RBP5.23□□□□□ -1.57
VPS13B-209ENST00000521559 PCBP3P57721 371 aaKnown RBP5.23□□□□□ -1.57
VPS13B-209ENST00000521559 TEKQ02763 1124 aa5.23□□□□□ -1.57
VPS13B-209ENST00000521559 SNX17Q15036 470 aa5.23□□□□□ -1.57
VPS13B-209ENST00000521559 NR0B2Q15466 257 aa5.23□□□□□ -1.57
VPS13B-209ENST00000521559 ZNF394Q53GI3 561 aa5.23□□□□□ -1.57
VPS13B-209ENST00000521559 ZNF648Q5T619 568 aaPredicted RBP5.23□□□□□ -1.57
VPS13B-209ENST00000521559 TAB3Q8N5C8 712 aaPredicted RBP5.23□□□□□ -1.57
VPS13B-209ENST00000521559 LIN37Q96GY3 246 aaPredicted RBP5.23□□□□□ -1.57
VPS13B-209ENST00000521559 TM9SF2Q99805 663 aa5.23□□□□□ -1.57
VPS13B-209ENST00000521559 HDAC8Q9BY41 377 aa5.23□□□□□ -1.57
VPS13B-209ENST00000521559 MKRN2Q9H000 416 aaKnown RBP5.23□□□□□ -1.57
VPS13B-209ENST00000521559 PRR13Q9NZ81 148 aa5.23□□□□□ -1.57
VPS13B-209ENST00000521559 ERCC6Q03468 1493 aa5.23□□□□□ -1.57
VPS13B-209ENST00000521559 FANCD2Q9BXW9 1451 aa5.22□□□□□ -1.57
VPS13B-209ENST00000521559 SHISA3A0PJX4 238 aa5.22□□□□□ -1.57
VPS13B-209ENST00000521559 SIGLEC6O43699 453 aa5.22□□□□□ -1.57
VPS13B-209ENST00000521559 TRIM26Q12899 539 aaPredicted RBP5.22□□□□□ -1.57
VPS13B-209ENST00000521559 LCE3BQ5TA77 95 aa5.22□□□□□ -1.57
VPS13B-209ENST00000521559 FBXW10Q5XX13 1052 aa5.22□□□□□ -1.57
VPS13B-209ENST00000521559 KRTAP19-1Q8IUB9 90 aa5.22□□□□□ -1.57
VPS13B-209ENST00000521559 FBXO15Q8NCQ5 510 aaPredicted RBP5.22□□□□□ -1.57
VPS13B-209ENST00000521559 LINC00116Q8NCU8 138 aa5.22□□□□□ -1.57
VPS13B-209ENST00000521559 SMARCC1Q92922 1105 aaPredicted RBP5.22□□□□□ -1.57
VPS13B-209ENST00000521559 MRRFQ96E11 262 aaKnown RBP5.22□□□□□ -1.57
VPS13B-209ENST00000521559 TCTN2Q96GX1 697 aa5.22□□□□□ -1.57
VPS13B-209ENST00000521559 SLC6A18Q96N87 628 aa5.22□□□□□ -1.57
VPS13B-209ENST00000521559 CRBNQ96SW2 442 aa5.22□□□□□ -1.57
VPS13B-209ENST00000521559 CWC22Q9HCG8 908 aaKnown RBP5.22□□□□□ -1.57
VPS13B-209ENST00000521559 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.22□□□□□ -1.57
VPS13B-209ENST00000521559 FBXL21Q9UKT6 434 aa5.22□□□□□ -1.57
VPS13B-209ENST00000521559 PCDHB12Q9Y5F1 795 aa5.22□□□□□ -1.57
VPS13B-209ENST00000521559 PCDHGB7Q9Y5F8 929 aa5.22□□□□□ -1.57
VPS13B-209ENST00000521559 BTBD11A6QL63 1104 aa5.21□□□□□ -1.58
VPS13B-209ENST00000521559 RPL10P27635 214 aaKnown RBP5.21□□□□□ -1.58
VPS13B-209ENST00000521559 USHBP1Q8N6Y0 703 aa5.21□□□□□ -1.58
VPS13B-209ENST00000521559 RBBP8NLQ8NC74 664 aaPredicted RBP5.21□□□□□ -1.58
VPS13B-209ENST00000521559 SLC9A7Q96T83 725 aa5.21□□□□□ -1.58
VPS13B-209ENST00000521559 PRDM14Q9GZV8 571 aa5.21□□□□□ -1.58
VPS13B-209ENST00000521559 SLC6A17Q9H1V8 727 aa5.21□□□□□ -1.58
VPS13B-209ENST00000521559 EPB41L4BQ9H329 900 aa5.21□□□□□ -1.58
VPS13B-209ENST00000521559 ANTXR1Q9H6X2 564 aa5.21□□□□□ -1.58
VPS13B-209ENST00000521559 CHST7Q9NS84 486 aa5.21□□□□□ -1.58
VPS13B-209ENST00000521559 SUCOQ9UBS9 1254 aaKnown RBP5.21□□□□□ -1.58
VPS13B-209ENST00000521559 ZMYM5Q9UJ78 669 aa5.21□□□□□ -1.58
VPS13B-209ENST00000521559 TCFL5Q9UL49 500 aa5.21□□□□□ -1.58
VPS13B-209ENST00000521559 SLC12A7Q9Y666 1083 aa5.21□□□□□ -1.58
VPS13B-209ENST00000521559 CEP164Q9UPV0 1460 aa5.2□□□□□ -1.58
VPS13B-209ENST00000521559 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.2□□□□□ -1.58
VPS13B-209ENST00000521559 PRAMEF1O95521 474 aa5.2□□□□□ -1.58
VPS13B-209ENST00000521559 ERVFC1P60507 584 aa5.2□□□□□ -1.58
VPS13B-209ENST00000521559 RACK1P63244 317 aaKnown RBP5.2□□□□□ -1.58
VPS13B-209ENST00000521559 MESP2Q0VG99 397 aa5.2□□□□□ -1.58
VPS13B-209ENST00000521559 AUHQ13825 339 aaKnown RBP5.2□□□□□ -1.58
VPS13B-209ENST00000521559 SLC14A2Q15849 920 aa5.2□□□□□ -1.58
VPS13B-209ENST00000521559 BBS9Q3SYG4 887 aa5.2□□□□□ -1.58
VPS13B-209ENST00000521559 PRR23BQ6ZRT6 265 aa5.2□□□□□ -1.58
VPS13B-209ENST00000521559 WAPLQ7Z5K2 1190 aa5.2□□□□□ -1.58
VPS13B-209ENST00000521559 TMC3Q7Z5M5 1100 aa5.2□□□□□ -1.58
VPS13B-209ENST00000521559 KRTAP1-3Q8IUG1 177 aa5.2□□□□□ -1.58
VPS13B-209ENST00000521559 TMEM192Q8IY95 271 aa5.2□□□□□ -1.58
VPS13B-209ENST00000521559 CCDC144CPQ8IYA2 1237 aa5.2□□□□□ -1.58
VPS13B-209ENST00000521559 ZNF512BQ96KM6 892 aaPredicted RBP5.2□□□□□ -1.58
VPS13B-209ENST00000521559 NSUN3Q9H649 340 aaKnown RBP5.2□□□□□ -1.58
VPS13B-209ENST00000521559 DCP1AQ9NPI6 582 aaPredicted RBP5.2□□□□□ -1.58
VPS13B-209ENST00000521559 DBX1A6NMT0 343 aa5.19□□□□□ -1.58
VPS13B-209ENST00000521559 NFIBO00712 420 aa5.19□□□□□ -1.58
VPS13B-209ENST00000521559 SYPP08247 313 aa5.19□□□□□ -1.58
VPS13B-209ENST00000521559 GUCY2CP25092 1073 aa5.19□□□□□ -1.58
VPS13B-209ENST00000521559 KIR2DL1P43626 348 aaPredicted RBP5.19□□□□□ -1.58
VPS13B-209ENST00000521559 KIR2DL2P43627 348 aaPredicted RBP5.19□□□□□ -1.58
VPS13B-209ENST00000521559 PMS1P54277 932 aaKnown RBP5.19□□□□□ -1.58
VPS13B-209ENST00000521559 PAK2Q13177 524 aa5.19□□□□□ -1.58
VPS13B-209ENST00000521559 FZD5Q13467 585 aa5.19□□□□□ -1.58
VPS13B-209ENST00000521559 IRF2BP1Q8IU81 584 aa5.19□□□□□ -1.58
VPS13B-209ENST00000521559 C7orf61Q8IZ16 206 aa5.19□□□□□ -1.58
VPS13B-209ENST00000521559 OR6P1Q8NGX9 317 aa5.19□□□□□ -1.58
VPS13B-209ENST00000521559 LINC01599Q8WXQ3 324 aa5.19□□□□□ -1.58
VPS13B-209ENST00000521559 SLC26A8Q96RN1 970 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms