RNA–Protein interactions for RNA: ENST00000521167.1

TRAPPC9-209, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-209ENST00000521167 ERVK-9P63128 1117 aa12.39□□□□□ -0.43
TRAPPC9-209ENST00000521167 ERVK-24P63145 666 aa12.39□□□□□ -0.43
TRAPPC9-209ENST00000521167 PPARAQ07869 468 aa12.39□□□□□ -0.43
TRAPPC9-209ENST00000521167 COG2Q14746 738 aa12.39□□□□□ -0.43
TRAPPC9-209ENST00000521167 CCDC129Q6ZRS4 1044 aa12.39□□□□□ -0.43
TRAPPC9-209ENST00000521167 SH3TC2Q8TF17 1288 aa12.39□□□□□ -0.43
TRAPPC9-209ENST00000521167 RILPL2Q969X0 211 aa12.39□□□□□ -0.43
TRAPPC9-209ENST00000521167 RPAP3Q9H6T3 665 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC9-209ENST00000521167 TXNRD2Q9NNW7 524 aa12.39□□□□□ -0.43
TRAPPC9-209ENST00000521167 NYAP2Q9P242 653 aa12.39□□□□□ -0.43
TRAPPC9-209ENST00000521167 GJD2Q9UKL4 321 aa12.39□□□□□ -0.43
TRAPPC9-209ENST00000521167 HIP1O00291 1037 aa12.38□□□□□ -0.43
TRAPPC9-209ENST00000521167 WDR46O15213 610 aaKnown RBP12.38□□□□□ -0.43
TRAPPC9-209ENST00000521167 SDSP20132 328 aa12.38□□□□□ -0.43
TRAPPC9-209ENST00000521167 MFAP1P55081 439 aaKnown RBP12.38□□□□□ -0.43
TRAPPC9-209ENST00000521167 UBXN2AP68543 259 aa12.38□□□□□ -0.43
TRAPPC9-209ENST00000521167 CCNA1P78396 465 aa12.38□□□□□ -0.43
TRAPPC9-209ENST00000521167 NMIQ13287 307 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC9-209ENST00000521167 Q3C1V9 767 aa12.38□□□□□ -0.43
TRAPPC9-209ENST00000521167 CCAR1Q8IX12 1150 aaKnown RBP12.38□□□□□ -0.43
TRAPPC9-209ENST00000521167 FAM227BQ96M60 508 aa12.38□□□□□ -0.43
TRAPPC9-209ENST00000521167 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.38□□□□□ -0.43
TRAPPC9-209ENST00000521167 GOPCQ9HD26 462 aa12.38□□□□□ -0.43
TRAPPC9-209ENST00000521167 HTTP42858 3142 aa12.38□□□□□ -0.43
TRAPPC9-209ENST00000521167 IGKV6D-41A0A0C4DH26 115 aa12.37□□□□□ -0.43
TRAPPC9-209ENST00000521167 A0A0D9SFI3 127 aa12.37□□□□□ -0.43
TRAPPC9-209ENST00000521167 SPDYE16A6NNV3 312 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC9-209ENST00000521167 FOXP2O15409 715 aa12.37□□□□□ -0.43
TRAPPC9-209ENST00000521167 CNMDO75829 334 aa12.37□□□□□ -0.43
TRAPPC9-209ENST00000521167 CAPN2P17655 700 aa12.37□□□□□ -0.43
TRAPPC9-209ENST00000521167 ATP2B2Q01814 1243 aa12.37□□□□□ -0.43
TRAPPC9-209ENST00000521167 KIAA1755Q5JYT7 1200 aa12.37□□□□□ -0.43
TRAPPC9-209ENST00000521167 PPP4R3BQ5MIZ7 849 aa12.37□□□□□ -0.43
TRAPPC9-209ENST00000521167 POTEEQ6S8J3 1075 aa12.37□□□□□ -0.43
TRAPPC9-209ENST00000521167 CLEC10AQ8IUN9 316 aa12.37□□□□□ -0.43
TRAPPC9-209ENST00000521167 STK11IPQ8N1F8 1099 aa12.37□□□□□ -0.43
TRAPPC9-209ENST00000521167 MB21D1Q8N884 522 aa12.37□□□□□ -0.43
TRAPPC9-209ENST00000521167 NEDD1Q8NHV4 660 aa12.37□□□□□ -0.43
TRAPPC9-209ENST00000521167 MKL1Q969V6 931 aa12.37□□□□□ -0.43
TRAPPC9-209ENST00000521167 PAGR1Q9BTK6 254 aa12.37□□□□□ -0.43
TRAPPC9-209ENST00000521167 TANGO6Q9C0B7 1094 aa12.37□□□□□ -0.43
TRAPPC9-209ENST00000521167 BIN2Q9UBW5 565 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC9-209ENST00000521167 ANAPC4Q9UJX5 808 aa12.37□□□□□ -0.43
TRAPPC9-209ENST00000521167 SYNPO2Q9UMS6 1093 aa12.37□□□□□ -0.43
TRAPPC9-209ENST00000521167 COL11A1P12107 1806 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC9-209ENST00000521167 PRDM1O75626 825 aa12.36□□□□□ -0.43
TRAPPC9-209ENST00000521167 FGAP02671 866 aa12.36□□□□□ -0.43
TRAPPC9-209ENST00000521167 VPS53Q5VIR6 699 aa12.36□□□□□ -0.43
TRAPPC9-209ENST00000521167 PLEKHH3Q7Z736 793 aa12.36□□□□□ -0.43
TRAPPC9-209ENST00000521167 NUDT12Q9BQG2 462 aa12.36□□□□□ -0.43
TRAPPC9-209ENST00000521167 ZMYM6O95789 1325 aa12.36□□□□□ -0.43
TRAPPC9-209ENST00000521167 CCDC171Q6TFL3 1326 aa12.36□□□□□ -0.43
TRAPPC9-209ENST00000521167 PLIN4Q96Q06 1357 aa12.35□□□□□ -0.43
TRAPPC9-209ENST00000521167 PEX10O60683 326 aa12.35□□□□□ -0.43
TRAPPC9-209ENST00000521167 FGRP09769 529 aa12.35□□□□□ -0.43
TRAPPC9-209ENST00000521167 TSPY3P0CV98 308 aa12.35□□□□□ -0.43
TRAPPC9-209ENST00000521167 TSPY8P0CW00 308 aa12.35□□□□□ -0.43
TRAPPC9-209ENST00000521167 HSPD1P10809 573 aaKnown RBP12.35□□□□□ -0.43
TRAPPC9-209ENST00000521167 XRCC5P13010 732 aaKnown RBP12.35□□□□□ -0.43
TRAPPC9-209ENST00000521167 PDE4AP27815 886 aa12.35□□□□□ -0.43
TRAPPC9-209ENST00000521167 TFAP4Q01664 338 aa12.35□□□□□ -0.43
TRAPPC9-209ENST00000521167 GPR142Q7Z601 462 aa12.35□□□□□ -0.43
TRAPPC9-209ENST00000521167 TRMT44Q8IYL2 757 aaKnown RBP12.35□□□□□ -0.43
TRAPPC9-209ENST00000521167 SPICE1Q8N0Z3 855 aa12.35□□□□□ -0.43
TRAPPC9-209ENST00000521167 NKX2-3Q8TAU0 364 aa12.35□□□□□ -0.43
TRAPPC9-209ENST00000521167 SOCS4Q8WXH5 440 aa12.35□□□□□ -0.43
TRAPPC9-209ENST00000521167 USP6NLQ92738 828 aa12.35□□□□□ -0.43
TRAPPC9-209ENST00000521167 PORCNQ9H237 461 aa12.35□□□□□ -0.43
TRAPPC9-209ENST00000521167 DIAPH3Q9NSV4 1193 aa12.35□□□□□ -0.43
TRAPPC9-209ENST00000521167 MTMR4Q9NYA4 1195 aa12.35□□□□□ -0.43
TRAPPC9-209ENST00000521167 BTBD7Q9P203 1132 aa12.35□□□□□ -0.43
TRAPPC9-209ENST00000521167 CLIP2Q9UDT6 1046 aa12.35□□□□□ -0.43
TRAPPC9-209ENST00000521167 ADAMTS5Q9UNA0 930 aa12.35□□□□□ -0.43
TRAPPC9-209ENST00000521167 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.35□□□□□ -0.43
TRAPPC9-209ENST00000521167 A0A0G2JMZ2 1700 aa12.34□□□□□ -0.43
TRAPPC9-209ENST00000521167 SLC15A5A6NIM6 579 aa12.34□□□□□ -0.43
TRAPPC9-209ENST00000521167 F5H6K3 240 aa12.34□□□□□ -0.43
TRAPPC9-209ENST00000521167 ORC4O43929 436 aa12.34□□□□□ -0.43
TRAPPC9-209ENST00000521167 FLOT1O75955 427 aa12.34□□□□□ -0.43
TRAPPC9-209ENST00000521167 TTLL1O95922 423 aa12.34□□□□□ -0.43
TRAPPC9-209ENST00000521167 GJB1P08034 283 aa12.34□□□□□ -0.43
TRAPPC9-209ENST00000521167 CCL5P13501 91 aa12.34□□□□□ -0.43
TRAPPC9-209ENST00000521167 ELNP15502 786 aa12.34□□□□□ -0.43
TRAPPC9-209ENST00000521167 EN2P19622 333 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC9-209ENST00000521167 CTDSPL2Q05D32 466 aa12.34□□□□□ -0.43
TRAPPC9-209ENST00000521167 KLRC3Q07444 240 aa12.34□□□□□ -0.43
TRAPPC9-209ENST00000521167 MTFR1Q15390 333 aa12.34□□□□□ -0.43
TRAPPC9-209ENST00000521167 MORN1Q5T089 497 aa12.34□□□□□ -0.43
TRAPPC9-209ENST00000521167 TTC22Q5TAA0 569 aa12.34□□□□□ -0.43
TRAPPC9-209ENST00000521167 TMEM92Q6UXU6 159 aa12.34□□□□□ -0.43
TRAPPC9-209ENST00000521167 ZNF589Q86UQ0 364 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC9-209ENST00000521167 HS6ST3Q8IZP7 471 aa12.34□□□□□ -0.43
TRAPPC9-209ENST00000521167 SHCBP1Q8NEM2 672 aa12.34□□□□□ -0.43
TRAPPC9-209ENST00000521167 CEP95Q96GE4 821 aa12.34□□□□□ -0.43
TRAPPC9-209ENST00000521167 CWC22Q9HCG8 908 aaKnown RBP12.34□□□□□ -0.43
TRAPPC9-209ENST00000521167 CENPFP49454 3210 aa12.33□□□□□ -0.43
TRAPPC9-209ENST00000521167 STRNO43815 780 aa12.33□□□□□ -0.44
TRAPPC9-209ENST00000521167 HMGCRP04035 888 aa12.33□□□□□ -0.44
TRAPPC9-209ENST00000521167 INHAP05111 366 aa12.33□□□□□ -0.44
TRAPPC9-209ENST00000521167 PCP11498 1178 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms