RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 DDX21Q9NR30 783 aaKnown RBP eCLIP5.57□□□□□ -1.52
VPS13B-208ENST00000521037 SOX13Q9UN79 622 aa5.57□□□□□ -1.52
VPS13B-208ENST00000521037 FNDC3AQ9Y2H6 1198 aaKnown RBP5.57□□□□□ -1.52
VPS13B-208ENST00000521037 PRUNE2Q8WUY3 3088 aa5.57□□□□□ -1.52
VPS13B-208ENST00000521037 AFDNP55196 1824 aaKnown RBP5.57□□□□□ -1.52
VPS13B-208ENST00000521037 COL11A2P13942 1736 aaPredicted RBP5.57□□□□□ -1.52
VPS13B-208ENST00000521037 ANKRD31Q8N7Z5 1873 aa5.56□□□□□ -1.52
VPS13B-208ENST00000521037 PRMT3O60678 531 aa5.56□□□□□ -1.52
VPS13B-208ENST00000521037 TIAF1O95411 115 aa5.56□□□□□ -1.52
VPS13B-208ENST00000521037 C8AP07357 584 aa5.56□□□□□ -1.52
VPS13B-208ENST00000521037 ACPPP15309 386 aa5.56□□□□□ -1.52
VPS13B-208ENST00000521037 MAP4P27816 1152 aaKnown RBP5.56□□□□□ -1.52
VPS13B-208ENST00000521037 MAP2K2P36507 400 aa5.56□□□□□ -1.52
VPS13B-208ENST00000521037 LTV1Q96GA3 475 aaPredicted RBP5.56□□□□□ -1.52
VPS13B-208ENST00000521037 SUGCTQ9HAC7 445 aa5.56□□□□□ -1.52
VPS13B-208ENST00000521037 DZANK1Q9NVP4 752 aa5.56□□□□□ -1.52
VPS13B-208ENST00000521037 FAM13BQ9NYF5 915 aa5.56□□□□□ -1.52
VPS13B-208ENST00000521037 TMEM63CQ9P1W3 806 aa5.56□□□□□ -1.52
VPS13B-208ENST00000521037 ZMIZ1Q9ULJ6 1067 aa5.56□□□□□ -1.52
VPS13B-208ENST00000521037 NOVA2Q9UNW9 492 aaKnown RBP5.56□□□□□ -1.52
VPS13B-208ENST00000521037 KTN1Q86UP2 1357 aaKnown RBP5.55□□□□□ -1.52
VPS13B-208ENST00000521037 SCN11AQ9UI33 1791 aa5.55□□□□□ -1.52
VPS13B-208ENST00000521037 CGNL1Q0VF96 1302 aa5.55□□□□□ -1.52
VPS13B-208ENST00000521037 TRAF5O00463 557 aa5.55□□□□□ -1.52
VPS13B-208ENST00000521037 SART1O43290 800 aaKnown RBP5.55□□□□□ -1.52
VPS13B-208ENST00000521037 DLGAP3O95886 979 aa5.55□□□□□ -1.52
VPS13B-208ENST00000521037 ELOAQ14241 798 aaKnown RBP5.55□□□□□ -1.52
VPS13B-208ENST00000521037 CPSF6Q16630 551 aaKnown RBP eCLIP5.55□□□□□ -1.52
VPS13B-208ENST00000521037 CDCA8Q53HL2 280 aa5.55□□□□□ -1.52
VPS13B-208ENST00000521037 PDE12Q6L8Q7 609 aaKnown RBP5.55□□□□□ -1.52
VPS13B-208ENST00000521037 XKR5Q6UX68 686 aa5.55□□□□□ -1.52
VPS13B-208ENST00000521037 SAPCD2Q86UD0 394 aa5.55□□□□□ -1.52
VPS13B-208ENST00000521037 SMG8Q8ND04 991 aaKnown RBP5.55□□□□□ -1.52
VPS13B-208ENST00000521037 GPR152Q8TDT2 470 aa5.55□□□□□ -1.52
VPS13B-208ENST00000521037 GATA6Q92908 595 aa5.55□□□□□ -1.52
VPS13B-208ENST00000521037 HHIPQ96QV1 700 aa5.55□□□□□ -1.52
VPS13B-208ENST00000521037 RUSC1Q9BVN2 902 aa5.55□□□□□ -1.52
VPS13B-208ENST00000521037 ELP3Q9H9T3 547 aa5.55□□□□□ -1.52
VPS13B-208ENST00000521037 TJP1Q07157 1748 aa5.54□□□□□ -1.52
VPS13B-208ENST00000521037 PCDH11XQ9BZA7 1347 aa5.54□□□□□ -1.52
VPS13B-208ENST00000521037 PCDH11YQ9BZA8 1340 aa5.54□□□□□ -1.52
VPS13B-208ENST00000521037 FAM155AB1AL88 458 aaPredicted RBP5.54□□□□□ -1.52
VPS13B-208ENST00000521037 SOX1O00570 391 aaPredicted RBP5.54□□□□□ -1.52
VPS13B-208ENST00000521037 ADMP35318 185 aa5.54□□□□□ -1.52
VPS13B-208ENST00000521037 NLRP12P59046 1061 aa5.54□□□□□ -1.52
VPS13B-208ENST00000521037 NFIXQ14938 502 aa5.54□□□□□ -1.52
VPS13B-208ENST00000521037 CIAPIN1Q6FI81 312 aa5.54□□□□□ -1.52
VPS13B-208ENST00000521037 NCAPG2Q86XI2 1143 aa5.54□□□□□ -1.52
VPS13B-208ENST00000521037 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.54□□□□□ -1.52
VPS13B-208ENST00000521037 GCC1Q96CN9 775 aa5.54□□□□□ -1.52
VPS13B-208ENST00000521037 CXXC1Q9P0U4 656 aaPredicted RBP5.54□□□□□ -1.52
VPS13B-208ENST00000521037 STIM2Q9P246 746 aa5.54□□□□□ -1.52
VPS13B-208ENST00000521037 LEMD3Q9Y2U8 911 aa5.54□□□□□ -1.52
VPS13B-208ENST00000521037 LAMA2P24043 3122 aaKnown RBP5.53□□□□□ -1.52
VPS13B-208ENST00000521037 CA12O43570 354 aa5.53□□□□□ -1.52
VPS13B-208ENST00000521037 TRPA1O75762 1119 aa5.53□□□□□ -1.52
VPS13B-208ENST00000521037 EPHX2P34913 555 aa5.53□□□□□ -1.52
VPS13B-208ENST00000521037 NAA30Q147X3 362 aaPredicted RBP5.53□□□□□ -1.52
VPS13B-208ENST00000521037 TTLL6Q8N841 843 aa5.53□□□□□ -1.52
VPS13B-208ENST00000521037 RETREG2Q8NC44 543 aa5.53□□□□□ -1.52
VPS13B-208ENST00000521037 SMG6Q86US8 1419 aaKnown RBP5.53□□□□□ -1.52
VPS13B-208ENST00000521037 SLX4Q8IY92 1834 aa5.53□□□□□ -1.52
VPS13B-208ENST00000521037 CACNA1SQ13698 1873 aa5.52□□□□□ -1.53
VPS13B-208ENST00000521037 EDC4Q6P2E9 1401 aaKnown RBP5.52□□□□□ -1.53
VPS13B-208ENST00000521037 FZD9O00144 591 aa5.52□□□□□ -1.53
VPS13B-208ENST00000521037 PDE2AO00408 941 aaPredicted RBP5.52□□□□□ -1.53
VPS13B-208ENST00000521037 RFX1P22670 979 aa5.52□□□□□ -1.53
VPS13B-208ENST00000521037 PDE4CQ08493 712 aa5.52□□□□□ -1.53
VPS13B-208ENST00000521037 C19orf57Q0VDD7 668 aa5.52□□□□□ -1.53
VPS13B-208ENST00000521037 CDPF1Q6NVV7 123 aa5.52□□□□□ -1.53
VPS13B-208ENST00000521037 FDX2Q6P4F2 183 aa5.52□□□□□ -1.53
VPS13B-208ENST00000521037 VN1R5Q7Z5H4 357 aa5.52□□□□□ -1.53
VPS13B-208ENST00000521037 FBXL6Q8N531 539 aa5.52□□□□□ -1.53
VPS13B-208ENST00000521037 C1orf127Q8N9H9 656 aa5.52□□□□□ -1.53
VPS13B-208ENST00000521037 NXPE3Q969Y0 559 aa5.52□□□□□ -1.53
VPS13B-208ENST00000521037 ASIC4Q96FT7 647 aa5.52□□□□□ -1.53
VPS13B-208ENST00000521037 HHIPL1Q96JK4 782 aa5.52□□□□□ -1.53
VPS13B-208ENST00000521037 FBXL18Q96ME1 805 aa5.52□□□□□ -1.53
VPS13B-208ENST00000521037 PRO3102Q9H379 93 aa5.52□□□□□ -1.53
VPS13B-208ENST00000521037 KANSL3Q9P2N6 904 aa5.52□□□□□ -1.53
VPS13B-208ENST00000521037 ABT1Q9ULW3 272 aaKnown RBP5.52□□□□□ -1.53
VPS13B-208ENST00000521037 A0A1W2PP64 1363 aa5.52□□□□□ -1.53
VPS13B-208ENST00000521037 RNF123Q5XPI4 1314 aa5.51□□□□□ -1.53
VPS13B-208ENST00000521037 IQCA1LA6NCM1 817 aa5.51□□□□□ -1.53
VPS13B-208ENST00000521037 PATL2C9JE40 543 aaKnown RBP5.51□□□□□ -1.53
VPS13B-208ENST00000521037 JUNBP17275 347 aaPredicted RBP5.51□□□□□ -1.53
VPS13B-208ENST00000521037 HMGB2P26583 209 aaKnown RBP5.51□□□□□ -1.53
VPS13B-208ENST00000521037 RFC4P35249 363 aa5.51□□□□□ -1.53
VPS13B-208ENST00000521037 ECE1P42892 770 aa5.51□□□□□ -1.53
VPS13B-208ENST00000521037 HSP90AB2PQ58FF8 381 aa5.51□□□□□ -1.53
VPS13B-208ENST00000521037 TMCO4Q5TGY1 634 aa5.51□□□□□ -1.53
VPS13B-208ENST00000521037 OLFM4Q6UX06 510 aa5.51□□□□□ -1.53
VPS13B-208ENST00000521037 DLK2Q6UY11 383 aa5.51□□□□□ -1.53
VPS13B-208ENST00000521037 VSIG10LQ86VR7 867 aa5.51□□□□□ -1.53
VPS13B-208ENST00000521037 C2CD5Q86YS7 1000 aa5.51□□□□□ -1.53
VPS13B-208ENST00000521037 WFDC3Q8IUB2 231 aa5.51□□□□□ -1.53
VPS13B-208ENST00000521037 AEBP1Q8IUX7 1158 aa5.51□□□□□ -1.53
VPS13B-208ENST00000521037 TMEM102Q8N9M5 508 aaPredicted RBP5.51□□□□□ -1.53
VPS13B-208ENST00000521037 RGS22Q8NE09 1264 aa5.51□□□□□ -1.53
VPS13B-208ENST00000521037 STK32AQ8WU08 396 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms