RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 ACER1Q8TDN7 264 aa21.43■■□□□ 1.02
VEGFA-222ENST00000520948 IL17RBQ9NRM6 502 aa21.43■■□□□ 1.02
VEGFA-222ENST00000520948 NEDD4P46934 1319 aa21.43■■□□□ 1.02
VEGFA-222ENST00000520948 RPTORQ8N122 1335 aa21.43■■□□□ 1.02
VEGFA-222ENST00000520948 SLC27A2O14975 620 aa21.42■■□□□ 1.02
VEGFA-222ENST00000520948 REC8O95072 547 aa21.42■■□□□ 1.02
VEGFA-222ENST00000520948 TSPY3P0CV98 308 aa21.42■■□□□ 1.02
VEGFA-222ENST00000520948 TSPY8P0CW00 308 aa21.42■■□□□ 1.02
VEGFA-222ENST00000520948 CAPN2P17655 700 aa21.42■■□□□ 1.02
VEGFA-222ENST00000520948 HOXA7P31268 230 aaPredicted RBP21.42■■□□□ 1.02
VEGFA-222ENST00000520948 NOVP48745 357 aa21.42■■□□□ 1.02
VEGFA-222ENST00000520948 CREB3L3Q68CJ9 461 aa21.42■■□□□ 1.02
VEGFA-222ENST00000520948 CLEC10AQ8IUN9 316 aa21.42■■□□□ 1.02
VEGFA-222ENST00000520948 C7orf61Q8IZ16 206 aa21.42■■□□□ 1.02
VEGFA-222ENST00000520948 GPRC5AQ8NFJ5 357 aa21.42■■□□□ 1.02
VEGFA-222ENST00000520948 KIAA1683Q9H0B3 1180 aa21.42■■□□□ 1.02
VEGFA-222ENST00000520948 TCP11L1Q9NUJ3 509 aa21.42■■□□□ 1.02
VEGFA-222ENST00000520948 NYAP2Q9P242 653 aa21.42■■□□□ 1.02
VEGFA-222ENST00000520948 E7EWF7 191 aa21.41■■□□□ 1.02
VEGFA-222ENST00000520948 RANBP6O60518 1105 aaKnown RBP21.41■■□□□ 1.02
VEGFA-222ENST00000520948 EEF2P13639 858 aaKnown RBP21.41■■□□□ 1.02
VEGFA-222ENST00000520948 ZYXQ15942 572 aaKnown RBP21.41■■□□□ 1.02
VEGFA-222ENST00000520948 TSGA10IPQ3SY00 556 aa21.41■■□□□ 1.02
VEGFA-222ENST00000520948 STOX1Q6ZVD7 989 aa21.41■■□□□ 1.02
VEGFA-222ENST00000520948 KCNB2Q92953 911 aa21.41■■□□□ 1.02
VEGFA-222ENST00000520948 MKL1Q969V6 931 aa21.41■■□□□ 1.02
VEGFA-222ENST00000520948 PAGR1Q9BTK6 254 aa21.41■■□□□ 1.02
VEGFA-222ENST00000520948 USP26Q9BXU7 913 aa21.41■■□□□ 1.02
VEGFA-222ENST00000520948 MTMR4Q9NYA4 1195 aa21.41■■□□□ 1.02
VEGFA-222ENST00000520948 TSPY2A6NKD2 308 aa21.4■■□□□ 1.02
VEGFA-222ENST00000520948 PRKAR2AP13861 404 aaKnown RBP21.4■■□□□ 1.02
VEGFA-222ENST00000520948 ICA1Q05084 483 aa21.4■■□□□ 1.02
VEGFA-222ENST00000520948 RRP12Q5JTH9 1297 aaKnown RBP21.4■■□□□ 1.02
VEGFA-222ENST00000520948 ANKLE1Q8NAG6 615 aa21.4■■□□□ 1.02
VEGFA-222ENST00000520948 ESR2Q92731 530 aa21.4■■□□□ 1.02
VEGFA-222ENST00000520948 CEP95Q96GE4 821 aa21.4■■□□□ 1.02
VEGFA-222ENST00000520948 C12orf42Q96LP6 360 aa21.4■■□□□ 1.02
VEGFA-222ENST00000520948 NUDT12Q9BQG2 462 aa21.4■■□□□ 1.02
VEGFA-222ENST00000520948 KRT23Q9C075 422 aa21.4■■□□□ 1.02
VEGFA-222ENST00000520948 CNNM2Q9H8M5 875 aa21.4■■□□□ 1.02
VEGFA-222ENST00000520948 TOMM22Q9NS69 142 aa21.4■■□□□ 1.02
VEGFA-222ENST00000520948 EMILIN3Q9NT22 766 aa21.4■■□□□ 1.02
VEGFA-222ENST00000520948 RBPJLQ9UBG7 517 aa21.4■■□□□ 1.02
VEGFA-222ENST00000520948 TMX2Q9Y320 296 aa21.4■■□□□ 1.02
VEGFA-222ENST00000520948 SOX1O00570 391 aaPredicted RBP21.39■■□□□ 1.01
VEGFA-222ENST00000520948 MNX1P50219 401 aaPredicted RBP21.39■■□□□ 1.01
VEGFA-222ENST00000520948 Q3C1V9 767 aa21.39■■□□□ 1.01
VEGFA-222ENST00000520948 C8orf34Q49A92 452 aa21.39■■□□□ 1.01
VEGFA-222ENST00000520948 SOCS4Q8WXH5 440 aa21.39■■□□□ 1.01
VEGFA-222ENST00000520948 PORCNQ9H237 461 aa21.39■■□□□ 1.01
VEGFA-222ENST00000520948 ZSWIM5Q9P217 1185 aa21.39■■□□□ 1.01
VEGFA-222ENST00000520948 ZMYND8Q9ULU4 1186 aaPredicted RBP21.39■■□□□ 1.01
VEGFA-222ENST00000520948 B4E1Z4 1266 aa21.38■■□□□ 1.01
VEGFA-222ENST00000520948 NMT2O60551 498 aa21.38■■□□□ 1.01
VEGFA-222ENST00000520948 KDM4AO75164 1064 aa21.38■■□□□ 1.01
VEGFA-222ENST00000520948 HSPA4P34932 840 aa21.38■■□□□ 1.01
VEGFA-222ENST00000520948 ERVK-9P63128 1117 aa21.38■■□□□ 1.01
VEGFA-222ENST00000520948 ERVK-24P63145 666 aa21.38■■□□□ 1.01
VEGFA-222ENST00000520948 USP17L2Q6R6M4 530 aa21.38■■□□□ 1.01
VEGFA-222ENST00000520948 POTEEQ6S8J3 1075 aa21.38■■□□□ 1.01
VEGFA-222ENST00000520948 CCAR1Q8IX12 1150 aaKnown RBP21.38■■□□□ 1.01
VEGFA-222ENST00000520948 FEZ1Q99689 392 aa21.38■■□□□ 1.01
VEGFA-222ENST00000520948 ARHGEF10LQ9HCE6 1279 aa21.38■■□□□ 1.01
VEGFA-222ENST00000520948 ZKSCAN1P17029 563 aaPredicted RBP21.37■■□□□ 1.01
VEGFA-222ENST00000520948 MAPK4P31152 587 aa21.37■■□□□ 1.01
VEGFA-222ENST00000520948 USP14P54578 494 aa21.37■■□□□ 1.01
VEGFA-222ENST00000520948 MAP3K21Q5TCX8 1036 aa21.37■■□□□ 1.01
VEGFA-222ENST00000520948 RASEFQ8IZ41 740 aa21.37■■□□□ 1.01
VEGFA-222ENST00000520948 LRCH3Q96II8 777 aa21.37■■□□□ 1.01
VEGFA-222ENST00000520948 C11orf49Q9H6J7 331 aa21.37■■□□□ 1.01
VEGFA-222ENST00000520948 CLIP2Q9UDT6 1046 aa21.37■■□□□ 1.01
VEGFA-222ENST00000520948 SYNPO2Q9UMS6 1093 aa21.37■■□□□ 1.01
VEGFA-222ENST00000520948 MYH4Q9Y623 1939 aa21.37■■□□□ 1.01
VEGFA-222ENST00000520948 A0A1W2PPC1 479 aa21.36■■□□□ 1.01
VEGFA-222ENST00000520948 SEC24BO95487 1268 aa21.36■■□□□ 1.01
VEGFA-222ENST00000520948 TTLL1O95922 423 aa21.36■■□□□ 1.01
VEGFA-222ENST00000520948 SYN1P17600 705 aa21.36■■□□□ 1.01
VEGFA-222ENST00000520948 CCL14Q16627 93 aa21.36■■□□□ 1.01
VEGFA-222ENST00000520948 KIAA1755Q5JYT7 1200 aa21.36■■□□□ 1.01
VEGFA-222ENST00000520948 PPP4R3BQ5MIZ7 849 aa21.36■■□□□ 1.01
VEGFA-222ENST00000520948 RNF20Q5VTR2 975 aa21.36■■□□□ 1.01
VEGFA-222ENST00000520948 RCSD1Q6JBY9 416 aa21.36■■□□□ 1.01
VEGFA-222ENST00000520948 CYB5R4Q7L1T6 521 aa21.36■■□□□ 1.01
VEGFA-222ENST00000520948 GPR142Q7Z601 462 aa21.36■■□□□ 1.01
VEGFA-222ENST00000520948 NCOA7Q8NI08 942 aa21.36■■□□□ 1.01
VEGFA-222ENST00000520948 TTC14Q96N46 770 aa21.36■■□□□ 1.01
VEGFA-222ENST00000520948 VCPKMTQ9H867 229 aa21.36■■□□□ 1.01
VEGFA-222ENST00000520948 OGDHLQ9ULD0 1010 aa21.36■■□□□ 1.01
VEGFA-222ENST00000520948 FRMPD3Q5JV73 1810 aa21.35■■□□□ 1.01
VEGFA-222ENST00000520948 XRCC5P13010 732 aaKnown RBP21.35■■□□□ 1.01
VEGFA-222ENST00000520948 CACNB2Q08289 660 aaPredicted RBP21.35■■□□□ 1.01
VEGFA-222ENST00000520948 MB21D2Q8IYB1 491 aaPredicted RBP21.35■■□□□ 1.01
VEGFA-222ENST00000520948 ANKS1AQ92625 1134 aa21.35■■□□□ 1.01
VEGFA-222ENST00000520948 SH2D4AQ9H788 454 aa21.35■■□□□ 1.01
VEGFA-222ENST00000520948 CWC22Q9HCG8 908 aaKnown RBP21.35■■□□□ 1.01
VEGFA-222ENST00000520948 CCND3P30281 292 aaPredicted RBP21.34■■□□□ 1.01
VEGFA-222ENST00000520948 TRDNQ13061 729 aa21.34■■□□□ 1.01
VEGFA-222ENST00000520948 COL9A3Q14050 684 aaPredicted RBP21.34■■□□□ 1.01
VEGFA-222ENST00000520948 PLEKHH3Q7Z736 793 aa21.34■■□□□ 1.01
VEGFA-222ENST00000520948 DGKHQ86XP1 1220 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms