RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 NCBP1Q09161 790 aaKnown RBP9.91□□□□□ -0.82
CTNNA1-223ENST00000520520 LRMPQ12912 555 aa9.91□□□□□ -0.82
CTNNA1-223ENST00000520520 TRIM29Q14134 588 aa9.91□□□□□ -0.82
CTNNA1-223ENST00000520520 RASA3Q14644 834 aa9.91□□□□□ -0.82
CTNNA1-223ENST00000520520 SUPT20HL1Q3ZLR7 823 aa9.91□□□□□ -0.82
CTNNA1-223ENST00000520520 TAF3Q5VWG9 929 aa9.91□□□□□ -0.82
CTNNA1-223ENST00000520520 C11orf57Q6ZUT1 292 aaPredicted RBP9.91□□□□□ -0.82
CTNNA1-223ENST00000520520 ATG9AQ7Z3C6 839 aa9.91□□□□□ -0.82
CTNNA1-223ENST00000520520 FMR1NBQ8N0W7 255 aaPredicted RBP9.91□□□□□ -0.82
CTNNA1-223ENST00000520520 ENGASEQ8NFI3 743 aa9.91□□□□□ -0.82
CTNNA1-223ENST00000520520 CACTINQ8WUQ7 758 aaKnown RBP9.91□□□□□ -0.82
CTNNA1-223ENST00000520520 CCDC34Q96HJ3 373 aa9.91□□□□□ -0.82
CTNNA1-223ENST00000520520 SEC62Q99442 399 aaKnown RBP9.91□□□□□ -0.82
CTNNA1-223ENST00000520520 PLA2G12BQ9BX93 195 aa9.91□□□□□ -0.82
CTNNA1-223ENST00000520520 RYDENQ9NUL5 291 aaKnown RBP9.91□□□□□ -0.82
CTNNA1-223ENST00000520520 IQSEC3Q9UPP2 1182 aaPredicted RBP9.91□□□□□ -0.82
CTNNA1-223ENST00000520520 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.91□□□□□ -0.82
CTNNA1-223ENST00000520520 COL1A1P02452 1464 aaPredicted RBP9.91□□□□□ -0.82
CTNNA1-223ENST00000520520 ZMYM6O95789 1325 aa9.9□□□□□ -0.82
CTNNA1-223ENST00000520520 KLF18A0A0U1RQI7 1052 aa9.9□□□□□ -0.82
CTNNA1-223ENST00000520520 GOLGA6L9A6NEM1 432 aa9.9□□□□□ -0.82
CTNNA1-223ENST00000520520 IKBKBO14920 756 aa9.9□□□□□ -0.82
CTNNA1-223ENST00000520520 SPTLC2O15270 562 aa9.9□□□□□ -0.82
CTNNA1-223ENST00000520520 PRC1O43663 620 aa9.9□□□□□ -0.82
CTNNA1-223ENST00000520520 USP2O75604 605 aaPredicted RBP9.9□□□□□ -0.82
CTNNA1-223ENST00000520520 CTDNEP1O95476 244 aa9.9□□□□□ -0.82
CTNNA1-223ENST00000520520 ZBTB48P10074 688 aaPredicted RBP9.9□□□□□ -0.82
CTNNA1-223ENST00000520520 GYG1P46976 350 aa9.9□□□□□ -0.82
CTNNA1-223ENST00000520520 NLRP12P59046 1061 aa9.9□□□□□ -0.82
CTNNA1-223ENST00000520520 CCT2P78371 535 aaKnown RBP9.9□□□□□ -0.82
CTNNA1-223ENST00000520520 GNL2Q13823 731 aaKnown RBP9.9□□□□□ -0.82
CTNNA1-223ENST00000520520 OTUD7BQ6GQQ9 843 aa9.9□□□□□ -0.82
CTNNA1-223ENST00000520520 LDHAL6AQ6ZMR3 332 aa9.9□□□□□ -0.82
CTNNA1-223ENST00000520520 NYAP1Q6ZVC0 841 aa9.9□□□□□ -0.82
CTNNA1-223ENST00000520520 CDAN1Q8IWY9 1227 aa9.9□□□□□ -0.82
CTNNA1-223ENST00000520520 DHX40Q8IX18 779 aaKnown RBP9.9□□□□□ -0.82
CTNNA1-223ENST00000520520 WASF1Q92558 559 aa9.9□□□□□ -0.82
CTNNA1-223ENST00000520520 OPTNQ96CV9 577 aa9.9□□□□□ -0.82
CTNNA1-223ENST00000520520 LRRC2Q9BYS8 371 aa9.9□□□□□ -0.82
CTNNA1-223ENST00000520520 GOLPH3LQ9H4A5 285 aa9.9□□□□□ -0.82
CTNNA1-223ENST00000520520 TDRD3Q9H7E2 651 aaKnown RBP9.9□□□□□ -0.82
CTNNA1-223ENST00000520520 EFCC1Q9HA90 598 aa9.9□□□□□ -0.82
CTNNA1-223ENST00000520520 KIAA1468Q9P260 1216 aa9.9□□□□□ -0.82
CTNNA1-223ENST00000520520 ORC3Q9UBD5 711 aaPredicted RBP9.9□□□□□ -0.82
CTNNA1-223ENST00000520520 DACH1Q9UI36 760 aa9.9□□□□□ -0.82
CTNNA1-223ENST00000520520 TTF2Q9UNY4 1162 aaKnown RBP9.9□□□□□ -0.82
CTNNA1-223ENST00000520520 OTOFQ9HC10 1997 aa9.89□□□□□ -0.83
CTNNA1-223ENST00000520520 ZNF213O14771 459 aa9.89□□□□□ -0.83
CTNNA1-223ENST00000520520 SMC2O95347 1197 aa9.89□□□□□ -0.83
CTNNA1-223ENST00000520520 SLU7O95391 586 aaKnown RBP9.89□□□□□ -0.83
CTNNA1-223ENST00000520520 IL1R1P14778 569 aa9.89□□□□□ -0.83
CTNNA1-223ENST00000520520 EN2P19622 333 aaPredicted RBP9.89□□□□□ -0.83
CTNNA1-223ENST00000520520 CMA1P23946 247 aa9.89□□□□□ -0.83
CTNNA1-223ENST00000520520 MMP14P50281 582 aa9.89□□□□□ -0.83
CTNNA1-223ENST00000520520 FOSBP53539 338 aa9.89□□□□□ -0.83
CTNNA1-223ENST00000520520 INHBEP58166 350 aa9.89□□□□□ -0.83
CTNNA1-223ENST00000520520 SNW1Q13573 536 aaKnown RBP9.89□□□□□ -0.83
CTNNA1-223ENST00000520520 NOM1Q5C9Z4 860 aaKnown RBP9.89□□□□□ -0.83
CTNNA1-223ENST00000520520 MFSD14BQ5SR56 506 aa9.89□□□□□ -0.83
CTNNA1-223ENST00000520520 MYSM1Q5VVJ2 828 aa9.89□□□□□ -0.83
CTNNA1-223ENST00000520520 ANO1Q5XXA6 986 aa9.89□□□□□ -0.83
CTNNA1-223ENST00000520520 FCHSD1Q86WN1 690 aa9.89□□□□□ -0.83
CTNNA1-223ENST00000520520 ANKRD13AQ8IZ07 590 aa9.89□□□□□ -0.83
CTNNA1-223ENST00000520520 CCAR2Q8N163 923 aaKnown RBP9.89□□□□□ -0.83
CTNNA1-223ENST00000520520 LINC00301Q8NCQ3 95 aa9.89□□□□□ -0.83
CTNNA1-223ENST00000520520 FBXO18Q8NFZ0 1043 aa9.89□□□□□ -0.83
CTNNA1-223ENST00000520520 ARID3AQ99856 593 aa9.89□□□□□ -0.83
CTNNA1-223ENST00000520520 OCEL1Q9H607 264 aa9.89□□□□□ -0.83
CTNNA1-223ENST00000520520 ARGLU1Q9NWB6 273 aaPredicted RBP9.89□□□□□ -0.83
CTNNA1-223ENST00000520520 ZNF70Q9UC06 446 aaPredicted RBP9.89□□□□□ -0.83
CTNNA1-223ENST00000520520 PCDHA7Q9UN72 937 aa9.89□□□□□ -0.83
CTNNA1-223ENST00000520520 PTPN22Q9Y2R2 807 aa9.89□□□□□ -0.83
CTNNA1-223ENST00000520520 PPP2R3BQ9Y5P8 575 aa9.89□□□□□ -0.83
CTNNA1-223ENST00000520520 ARAP2Q8WZ64 1704 aa9.89□□□□□ -0.83
CTNNA1-223ENST00000520520 STK36Q9NRP7 1315 aa9.88□□□□□ -0.83
CTNNA1-223ENST00000520520 IRS2Q9Y4H2 1338 aa9.88□□□□□ -0.83
CTNNA1-223ENST00000520520 M0R2C6 588 aa9.88□□□□□ -0.83
CTNNA1-223ENST00000520520 PPP6R2O75170 966 aa9.88□□□□□ -0.83
CTNNA1-223ENST00000520520 TPM1P09493 284 aa9.88□□□□□ -0.83
CTNNA1-223ENST00000520520 C7P10643 843 aa9.88□□□□□ -0.83
CTNNA1-223ENST00000520520 CACNB3P54284 484 aa9.88□□□□□ -0.83
CTNNA1-223ENST00000520520 CCZ1BP86790 482 aa9.88□□□□□ -0.83
CTNNA1-223ENST00000520520 CCZ1P86791 482 aaPredicted RBP9.88□□□□□ -0.83
CTNNA1-223ENST00000520520 SP3Q02447 781 aa9.88□□□□□ -0.83
CTNNA1-223ENST00000520520 TAF1CQ15572 869 aaPredicted RBP9.88□□□□□ -0.83
CTNNA1-223ENST00000520520 CCDC144BQ3MJ40 725 aa9.88□□□□□ -0.83
CTNNA1-223ENST00000520520 FILIP1Q7Z7B0 1213 aa9.88□□□□□ -0.83
CTNNA1-223ENST00000520520 VPS37DQ86XT2 251 aa9.88□□□□□ -0.83
CTNNA1-223ENST00000520520 CCDC144CPQ8IYA2 1237 aa9.88□□□□□ -0.83
CTNNA1-223ENST00000520520 MB21D2Q8IYB1 491 aaPredicted RBP9.88□□□□□ -0.83
CTNNA1-223ENST00000520520 MTMR14Q8NCE2 650 aa9.88□□□□□ -0.83
CTNNA1-223ENST00000520520 ZNF592Q92610 1267 aa9.88□□□□□ -0.83
CTNNA1-223ENST00000520520 OTUD5Q96G74 571 aa9.88□□□□□ -0.83
CTNNA1-223ENST00000520520 TMEM87BQ96K49 555 aa9.88□□□□□ -0.83
CTNNA1-223ENST00000520520 ZNF512BQ96KM6 892 aaPredicted RBP9.88□□□□□ -0.83
CTNNA1-223ENST00000520520 PTPN18Q99952 460 aa9.88□□□□□ -0.83
CTNNA1-223ENST00000520520 SRRTQ9BXP5 876 aaKnown RBP9.88□□□□□ -0.83
CTNNA1-223ENST00000520520 CFHR5Q9BXR6 569 aa9.88□□□□□ -0.83
CTNNA1-223ENST00000520520 TMEM39BQ9GZU3 492 aa9.88□□□□□ -0.83
CTNNA1-223ENST00000520520 NRBP1Q9UHY1 535 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms