RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 NBPF9Q3BBW0 867 aa7.41□□□□□ -1.22
SKP1-207ENST00000520417 TCTN2Q96GX1 697 aa7.41□□□□□ -1.22
SKP1-207ENST00000520417 SLC6A18Q96N87 628 aa7.41□□□□□ -1.22
SKP1-207ENST00000520417 EPB41L4BQ9H329 900 aa7.41□□□□□ -1.22
SKP1-207ENST00000520417 FITM1A5D6W6 292 aa7.4□□□□□ -1.22
SKP1-207ENST00000520417 RAP1GAPP47736 663 aa7.4□□□□□ -1.22
SKP1-207ENST00000520417 PCBP3P57721 371 aaKnown RBP7.4□□□□□ -1.22
SKP1-207ENST00000520417 JAG1P78504 1218 aa7.4□□□□□ -1.22
SKP1-207ENST00000520417 TEKQ02763 1124 aa7.4□□□□□ -1.22
SKP1-207ENST00000520417 SPPL2CQ8IUH8 684 aa7.4□□□□□ -1.22
SKP1-207ENST00000520417 FBXO15Q8NCQ5 510 aaPredicted RBP7.4□□□□□ -1.22
SKP1-207ENST00000520417 ENOX1Q8TC92 643 aaKnown RBP7.4□□□□□ -1.22
SKP1-207ENST00000520417 SYTL5Q8TDW5 730 aaPredicted RBP7.4□□□□□ -1.22
SKP1-207ENST00000520417 HDAC8Q9BY41 377 aa7.4□□□□□ -1.22
SKP1-207ENST00000520417 PRDM14Q9GZV8 571 aa7.4□□□□□ -1.22
SKP1-207ENST00000520417 TCFL5Q9UL49 500 aa7.4□□□□□ -1.22
SKP1-207ENST00000520417 MINPP1Q9UNW1 487 aa7.4□□□□□ -1.22
SKP1-207ENST00000520417 DBX1A6NMT0 343 aa7.39□□□□□ -1.23
SKP1-207ENST00000520417 PRAMEF1O95521 474 aa7.39□□□□□ -1.23
SKP1-207ENST00000520417 SYPP08247 313 aa7.39□□□□□ -1.23
SKP1-207ENST00000520417 GALK1P51570 392 aa7.39□□□□□ -1.23
SKP1-207ENST00000520417 TIGD5Q53EQ6 642 aa7.39□□□□□ -1.23
SKP1-207ENST00000520417 SIRT2Q8IXJ6 389 aa7.39□□□□□ -1.23
SKP1-207ENST00000520417 TMEM192Q8IY95 271 aa7.39□□□□□ -1.23
SKP1-207ENST00000520417 LILRA2Q8N149 483 aa7.39□□□□□ -1.23
SKP1-207ENST00000520417 USHBP1Q8N6Y0 703 aa7.39□□□□□ -1.23
SKP1-207ENST00000520417 DAGLBQ8NCG7 672 aa7.39□□□□□ -1.23
SKP1-207ENST00000520417 PPP1R16BQ96T49 567 aa7.39□□□□□ -1.23
SKP1-207ENST00000520417 SLC9A7Q96T83 725 aa7.39□□□□□ -1.23
SKP1-207ENST00000520417 METTL5Q9NRN9 209 aaKnown RBP7.39□□□□□ -1.23
SKP1-207ENST00000520417 NFIBO00712 420 aa7.38□□□□□ -1.23
SKP1-207ENST00000520417 PDE6BP35913 854 aa7.38□□□□□ -1.23
SKP1-207ENST00000520417 CCNFP41002 786 aa7.38□□□□□ -1.23
SKP1-207ENST00000520417 SLC14A2Q15849 920 aa7.38□□□□□ -1.23
SKP1-207ENST00000520417 RNF111Q6ZNA4 994 aa7.38□□□□□ -1.23
SKP1-207ENST00000520417 ZNF655Q8N720 491 aaPredicted RBP7.38□□□□□ -1.23
SKP1-207ENST00000520417 FAM86C1Q9NVL1 165 aa7.38□□□□□ -1.23
SKP1-207ENST00000520417 GFOD1Q9NXC2 390 aa7.38□□□□□ -1.23
SKP1-207ENST00000520417 PCDHB12Q9Y5F1 795 aa7.38□□□□□ -1.23
SKP1-207ENST00000520417 USP2O75604 605 aaPredicted RBP7.37□□□□□ -1.23
SKP1-207ENST00000520417 TMEM253P0C7T8 217 aa7.37□□□□□ -1.23
SKP1-207ENST00000520417 CHRNEQ04844 493 aa7.37□□□□□ -1.23
SKP1-207ENST00000520417 CCDC144CPQ8IYA2 1237 aa7.37□□□□□ -1.23
SKP1-207ENST00000520417 ANKS4BQ8N8V4 417 aa7.37□□□□□ -1.23
SKP1-207ENST00000520417 CHST7Q9NS84 486 aa7.37□□□□□ -1.23
SKP1-207ENST00000520417 EBF1Q9UH73 591 aa7.37□□□□□ -1.23
SKP1-207ENST00000520417 PPT2Q9UMR5 302 aa7.37□□□□□ -1.23
SKP1-207ENST00000520417 MEIS3P2A8K0S8 358 aa7.36□□□□□ -1.23
SKP1-207ENST00000520417 TNFRSF10CO14798 259 aa7.36□□□□□ -1.23
SKP1-207ENST00000520417 SCAMP3O14828 347 aaKnown RBP7.36□□□□□ -1.23
SKP1-207ENST00000520417 SIGLEC6O43699 453 aa7.36□□□□□ -1.23
SKP1-207ENST00000520417 PSPNO60542 156 aa7.36□□□□□ -1.23
SKP1-207ENST00000520417 RACK1P63244 317 aaKnown RBP7.36□□□□□ -1.23
SKP1-207ENST00000520417 TDRD10Q5VZ19 366 aaKnown RBP7.36□□□□□ -1.23
SKP1-207ENST00000520417 ZPBP2Q6X784 338 aa7.36□□□□□ -1.23
SKP1-207ENST00000520417 CEP128Q6ZU80 1094 aa7.36□□□□□ -1.23
SKP1-207ENST00000520417 ZNF605Q86T29 641 aa7.36□□□□□ -1.23
SKP1-207ENST00000520417 ANKLE2Q86XL3 938 aa7.36□□□□□ -1.23
SKP1-207ENST00000520417 KCNN1Q92952 543 aa7.36□□□□□ -1.23
SKP1-207ENST00000520417 DHRS1Q96LJ7 313 aa7.36□□□□□ -1.23
SKP1-207ENST00000520417 DSCC1Q9BVC3 393 aa7.36□□□□□ -1.23
SKP1-207ENST00000520417 SLC6A17Q9H1V8 727 aa7.36□□□□□ -1.23
SKP1-207ENST00000520417 ZNRF3Q9ULT6 936 aa7.36□□□□□ -1.23
SKP1-207ENST00000520417 RECKO95980 971 aa7.35□□□□□ -1.23
SKP1-207ENST00000520417 C1QTNF9P0C862 333 aa7.35□□□□□ -1.23
SKP1-207ENST00000520417 IMPDH2P12268 514 aa7.35□□□□□ -1.23
SKP1-207ENST00000520417 TRIM26Q12899 539 aaPredicted RBP7.35□□□□□ -1.23
SKP1-207ENST00000520417 AUHQ13825 339 aaKnown RBP7.35□□□□□ -1.23
SKP1-207ENST00000520417 C9orf131Q5VYM1 1079 aa7.35□□□□□ -1.23
SKP1-207ENST00000520417 TMEM132EQ6IEE7 984 aa7.35□□□□□ -1.23
SKP1-207ENST00000520417 CCDC81Q6ZN84 652 aa7.35□□□□□ -1.23
SKP1-207ENST00000520417 CDADC1Q9BWV3 514 aa7.35□□□□□ -1.23
SKP1-207ENST00000520417 KRTAP9-9Q9BYP9 154 aa7.35□□□□□ -1.23
SKP1-207ENST00000520417 KRTAP9-4Q9BYQ2 154 aa7.35□□□□□ -1.23
SKP1-207ENST00000520417 SP110Q9HB58 689 aa7.35□□□□□ -1.23
SKP1-207ENST00000520417 CWC22Q9HCG8 908 aaKnown RBP7.35□□□□□ -1.23
SKP1-207ENST00000520417 DDX41Q9UJV9 622 aaKnown RBP7.35□□□□□ -1.23
SKP1-207ENST00000520417 TP53P04637 393 aaPredicted RBP7.34□□□□□ -1.23
SKP1-207ENST00000520417 RUFY4Q6ZNE9 571 aa7.34□□□□□ -1.23
SKP1-207ENST00000520417 ZNF654Q8IZM8 581 aa7.34□□□□□ -1.23
SKP1-207ENST00000520417 LINC00116Q8NCU8 138 aa7.34□□□□□ -1.23
SKP1-207ENST00000520417 LINC01599Q8WXQ3 324 aa7.34□□□□□ -1.23
SKP1-207ENST00000520417 MRRFQ96E11 262 aaKnown RBP7.34□□□□□ -1.23
SKP1-207ENST00000520417 INTS4Q96HW7 963 aaKnown RBP7.34□□□□□ -1.23
SKP1-207ENST00000520417 TOX2Q96NM4 488 aa7.34□□□□□ -1.23
SKP1-207ENST00000520417 CRBNQ96SW2 442 aa7.34□□□□□ -1.23
SKP1-207ENST00000520417 SUCOQ9UBS9 1254 aaKnown RBP7.34□□□□□ -1.23
SKP1-207ENST00000520417 TCAF2A6NFQ2 919 aa7.33□□□□□ -1.24
SKP1-207ENST00000520417 C9IYK1 514 aa7.33□□□□□ -1.24
SKP1-207ENST00000520417 TSPAN15O95858 294 aa7.33□□□□□ -1.24
SKP1-207ENST00000520417 ACRP10323 421 aa7.33□□□□□ -1.24
SKP1-207ENST00000520417 PAK2Q13177 524 aa7.33□□□□□ -1.24
SKP1-207ENST00000520417 NR0B2Q15466 257 aa7.33□□□□□ -1.24
SKP1-207ENST00000520417 BBS9Q3SYG4 887 aa7.33□□□□□ -1.24
SKP1-207ENST00000520417 NOL9Q5SY16 702 aaKnown RBP7.33□□□□□ -1.24
SKP1-207ENST00000520417 ADGRF1Q5T601 910 aa7.33□□□□□ -1.24
SKP1-207ENST00000520417 ATG14Q6ZNE5 492 aa7.33□□□□□ -1.24
SKP1-207ENST00000520417 BHLHE22Q8NFJ8 381 aaPredicted RBP7.33□□□□□ -1.24
SKP1-207ENST00000520417 MAP6Q96JE9 813 aa7.33□□□□□ -1.24
SKP1-207ENST00000520417 YBX2Q9Y2T7 364 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms