RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 LNPKQ9C0E8 428 aa8.22□□□□□ -1.09
NPM1-206ENST00000519955 GBP3Q9H0R5 595 aa8.22□□□□□ -1.09
NPM1-206ENST00000519955 GPATCH2Q9NW75 528 aa8.22□□□□□ -1.09
NPM1-206ENST00000519955 MSRB2Q9Y3D2 182 aa8.22□□□□□ -1.09
NPM1-206ENST00000519955 ANKRD34BA5PLL1 514 aa8.21□□□□□ -1.1
NPM1-206ENST00000519955 SHOXO15266 292 aa8.21□□□□□ -1.1
NPM1-206ENST00000519955 NMIQ13287 307 aaPredicted RBP8.21□□□□□ -1.1
NPM1-206ENST00000519955 CDKAL1Q5VV42 579 aa8.21□□□□□ -1.1
NPM1-206ENST00000519955 EEPD1Q7L9B9 569 aa8.21□□□□□ -1.1
NPM1-206ENST00000519955 MISP3Q96FF7 219 aa8.21□□□□□ -1.1
NPM1-206ENST00000519955 PRDM14Q9GZV8 571 aa8.21□□□□□ -1.1
NPM1-206ENST00000519955 KLHL25Q9H0H3 589 aa8.21□□□□□ -1.1
NPM1-206ENST00000519955 CCDC113Q9H0I3 377 aa8.21□□□□□ -1.1
NPM1-206ENST00000519955 BSDC1Q9NW68 430 aaPredicted RBP8.21□□□□□ -1.1
NPM1-206ENST00000519955 CBFA2T2O43439 604 aa8.2□□□□□ -1.1
NPM1-206ENST00000519955 SIGLEC6O43699 453 aa8.2□□□□□ -1.1
NPM1-206ENST00000519955 EPHX1P07099 455 aa8.2□□□□□ -1.1
NPM1-206ENST00000519955 SRFP11831 508 aa8.2□□□□□ -1.1
NPM1-206ENST00000519955 ITGA4P13612 1032 aa8.2□□□□□ -1.1
NPM1-206ENST00000519955 CD247P20963 164 aa8.2□□□□□ -1.1
NPM1-206ENST00000519955 CLEC16AQ2KHT3 1053 aa8.2□□□□□ -1.1
NPM1-206ENST00000519955 DPH6Q7L8W6 267 aa8.2□□□□□ -1.1
NPM1-206ENST00000519955 HRASLS5Q96KN8 279 aa8.2□□□□□ -1.1
NPM1-206ENST00000519955 HSPA12BQ96MM6 686 aa8.2□□□□□ -1.1
NPM1-206ENST00000519955 DUSP15Q9H1R2 295 aaPredicted RBP8.2□□□□□ -1.1
NPM1-206ENST00000519955 EPN3Q9H201 632 aa8.2□□□□□ -1.1
NPM1-206ENST00000519955 GP6Q9HCN6 339 aa8.2□□□□□ -1.1
NPM1-206ENST00000519955 WHRNQ9P202 907 aa8.2□□□□□ -1.1
NPM1-206ENST00000519955 VAV3Q9UKW4 847 aa8.2□□□□□ -1.1
NPM1-206ENST00000519955 ZNF451Q9Y4E5 1061 aa8.2□□□□□ -1.1
NPM1-206ENST00000519955 A0A087WZG4 1122 aa8.19□□□□□ -1.1
NPM1-206ENST00000519955 SUSD5O60279 629 aa8.19□□□□□ -1.1
NPM1-206ENST00000519955 CD97P48960 835 aa8.19□□□□□ -1.1
NPM1-206ENST00000519955 PRKCQQ04759 706 aa8.19□□□□□ -1.1
NPM1-206ENST00000519955 SNW1Q13573 536 aaKnown RBP8.19□□□□□ -1.1
NPM1-206ENST00000519955 NFE2L2Q16236 605 aa8.19□□□□□ -1.1
NPM1-206ENST00000519955 MRM1Q6IN84 353 aaKnown RBP8.19□□□□□ -1.1
NPM1-206ENST00000519955 TMC3Q7Z5M5 1100 aa8.19□□□□□ -1.1
NPM1-206ENST00000519955 STK11IPQ8N1F8 1099 aa8.19□□□□□ -1.1
NPM1-206ENST00000519955 ASB11Q8WXH4 323 aa8.19□□□□□ -1.1
NPM1-206ENST00000519955 APBA2Q99767 749 aa8.19□□□□□ -1.1
NPM1-206ENST00000519955 KRTAP4-12Q9BQ66 201 aa8.19□□□□□ -1.1
NPM1-206ENST00000519955 SUSD2Q9UGT4 822 aa8.19□□□□□ -1.1
NPM1-206ENST00000519955 KIAA1324LA8MWY0 1029 aaPredicted RBP8.18□□□□□ -1.1
NPM1-206ENST00000519955 H3BS24 57 aa8.18□□□□□ -1.1
NPM1-206ENST00000519955 RBAK-RBAKDNI3L0D1 243 aa8.18□□□□□ -1.1
NPM1-206ENST00000519955 PPM1BO75688 479 aa8.18□□□□□ -1.1
NPM1-206ENST00000519955 CCDC144BQ3MJ40 725 aa8.18□□□□□ -1.1
NPM1-206ENST00000519955 NOL9Q5SY16 702 aaKnown RBP8.18□□□□□ -1.1
NPM1-206ENST00000519955 TSPYL5Q86VY4 417 aaPredicted RBP8.18□□□□□ -1.1
NPM1-206ENST00000519955 DAGLBQ8NCG7 672 aa8.18□□□□□ -1.1
NPM1-206ENST00000519955 ST13P5Q8NFI4 369 aaPredicted RBP8.18□□□□□ -1.1
NPM1-206ENST00000519955 SYTL5Q8TDW5 730 aaPredicted RBP8.18□□□□□ -1.1
NPM1-206ENST00000519955 ZSWIM4Q9H7M6 989 aa8.18□□□□□ -1.1
NPM1-206ENST00000519955 CHST7Q9NS84 486 aa8.18□□□□□ -1.1
NPM1-206ENST00000519955 SEMA3GQ9NS98 782 aa8.18□□□□□ -1.1
NPM1-206ENST00000519955 GFOD1Q9NXC2 390 aa8.18□□□□□ -1.1
NPM1-206ENST00000519955 ZSWIM5Q9P217 1185 aa8.18□□□□□ -1.1
NPM1-206ENST00000519955 FHOD1Q9Y613 1164 aa8.18□□□□□ -1.1
NPM1-206ENST00000519955 PITPNM2Q9BZ72 1349 aa8.18□□□□□ -1.1
NPM1-206ENST00000519955 SHISA3A0PJX4 238 aa8.17□□□□□ -1.1
NPM1-206ENST00000519955 PDPK1O15530 556 aa8.17□□□□□ -1.1
NPM1-206ENST00000519955 PRAMEF1O95521 474 aa8.17□□□□□ -1.1
NPM1-206ENST00000519955 PRNPP04156 253 aa8.17□□□□□ -1.1
NPM1-206ENST00000519955 SSTR4P31391 388 aa8.17□□□□□ -1.1
NPM1-206ENST00000519955 ZNF445P59923 1031 aa8.17□□□□□ -1.1
NPM1-206ENST00000519955 RASGRF1Q13972 1273 aa8.17□□□□□ -1.1
NPM1-206ENST00000519955 RASA3Q14644 834 aa8.17□□□□□ -1.1
NPM1-206ENST00000519955 AOC3Q16853 763 aa8.17□□□□□ -1.1
NPM1-206ENST00000519955 LCE3BQ5TA77 95 aa8.17□□□□□ -1.1
NPM1-206ENST00000519955 TMPRSS7Q7RTY8 843 aa8.17□□□□□ -1.1
NPM1-206ENST00000519955 ADAT2Q7Z6V5 191 aaKnown RBP8.17□□□□□ -1.1
NPM1-206ENST00000519955 DTX1Q86Y01 620 aa8.17□□□□□ -1.1
NPM1-206ENST00000519955 UBE2FQ969M7 185 aa8.17□□□□□ -1.1
NPM1-206ENST00000519955 ZNF669Q96BR6 464 aaPredicted RBP8.17□□□□□ -1.1
NPM1-206ENST00000519955 DEPDC7Q96QD5 511 aa8.17□□□□□ -1.1
NPM1-206ENST00000519955 SRPK1Q96SB4 655 aaKnown RBP8.17□□□□□ -1.1
NPM1-206ENST00000519955 HDAC8Q9BY41 377 aa8.17□□□□□ -1.1
NPM1-206ENST00000519955 CCDC85CA6NKD9 419 aa8.16□□□□□ -1.1
NPM1-206ENST00000519955 SPINK2P20155 84 aa8.16□□□□□ -1.1
NPM1-206ENST00000519955 TPP2P29144 1249 aaPredicted RBP8.16□□□□□ -1.1
NPM1-206ENST00000519955 ZNF655Q8N720 491 aaPredicted RBP8.16□□□□□ -1.1
NPM1-206ENST00000519955 RCC1LQ96I51 464 aaKnown RBP8.16□□□□□ -1.1
NPM1-206ENST00000519955 FGD4Q96M96 766 aa8.16□□□□□ -1.1
NPM1-206ENST00000519955 DSCC1Q9BVC3 393 aa8.16□□□□□ -1.1
NPM1-206ENST00000519955 SNTG2Q9NY99 539 aa8.16□□□□□ -1.1
NPM1-206ENST00000519955 DIS3Q9Y2L1 958 aaKnown RBP8.16□□□□□ -1.1
NPM1-206ENST00000519955 SUGT1Q9Y2Z0 365 aa8.16□□□□□ -1.1
NPM1-206ENST00000519955 MED26O95402 600 aa8.15□□□□□ -1.1
NPM1-206ENST00000519955 IFRD2Q12894 506 aaPredicted RBP8.15□□□□□ -1.1
NPM1-206ENST00000519955 BMS1Q14692 1282 aaKnown RBP8.15□□□□□ -1.1
NPM1-206ENST00000519955 GAB4Q2WGN9 574 aa8.15□□□□□ -1.1
NPM1-206ENST00000519955 VSIG10LQ86VR7 867 aa8.15□□□□□ -1.1
NPM1-206ENST00000519955 BCL7CQ8WUZ0 217 aaPredicted RBP8.15□□□□□ -1.1
NPM1-206ENST00000519955 MRFAP1L1Q96HT8 127 aa8.15□□□□□ -1.1
NPM1-206ENST00000519955 CDK11AQ9UQ88 783 aaPredicted RBP8.15□□□□□ -1.1
NPM1-206ENST00000519955 SLC5A6Q9Y289 635 aa8.15□□□□□ -1.1
NPM1-206ENST00000519955 SF3B6Q9Y3B4 125 aaKnown RBP8.15□□□□□ -1.1
NPM1-206ENST00000519955 AGRPO00253 132 aa8.14□□□□□ -1.11
NPM1-206ENST00000519955 SLC10A6Q3KNW5 377 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms