RNA–Protein interactions for RNA: ENST00000519920.1

EFR3A-203, Transcript of EFR3 homolog A, humanhuman

TSL 5

Gene EFR3A, Length 770 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-203ENST00000519920 SUCLG2Q96I99 432 aa6.54□□□□□ -1.36
EFR3A-203ENST00000519920 UBE2OQ9C0C9 1292 aaKnown RBP6.54□□□□□ -1.36
EFR3A-203ENST00000519920 ZMYND15Q9H091 742 aa6.54□□□□□ -1.36
EFR3A-203ENST00000519920 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.54□□□□□ -1.36
EFR3A-203ENST00000519920 KDM4CQ9H3R0 1056 aa6.54□□□□□ -1.36
EFR3A-203ENST00000519920 C11orf49Q9H6J7 331 aa6.54□□□□□ -1.36
EFR3A-203ENST00000519920 PGPEP1Q9NXJ5 209 aa6.54□□□□□ -1.36
EFR3A-203ENST00000519920 DAGLAQ9Y4D2 1042 aa6.54□□□□□ -1.36
EFR3A-203ENST00000519920 IL16Q14005 1332 aa6.53□□□□□ -1.36
EFR3A-203ENST00000519920 RPTORQ8N122 1335 aa6.53□□□□□ -1.36
EFR3A-203ENST00000519920 UNC80Q8N2C7 3258 aa6.53□□□□□ -1.36
EFR3A-203ENST00000519920 CTNND1O60716 968 aaKnown RBP6.53□□□□□ -1.36
EFR3A-203ENST00000519920 ARHGEF15O94989 841 aa6.53□□□□□ -1.36
EFR3A-203ENST00000519920 IFIT1P09914 478 aaKnown RBP6.53□□□□□ -1.36
EFR3A-203ENST00000519920 FGFR2P21802 821 aa6.53□□□□□ -1.36
EFR3A-203ENST00000519920 IRS1P35568 1242 aa6.53□□□□□ -1.36
EFR3A-203ENST00000519920 FAM109BQ6ICB4 259 aaPredicted RBP6.53□□□□□ -1.36
EFR3A-203ENST00000519920 SLC4A10Q6U841 1118 aa6.53□□□□□ -1.36
EFR3A-203ENST00000519920 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.53□□□□□ -1.36
EFR3A-203ENST00000519920 SCYL3Q8IZE3 742 aa6.53□□□□□ -1.36
EFR3A-203ENST00000519920 VGLL2Q8N8G2 317 aa6.53□□□□□ -1.36
EFR3A-203ENST00000519920 SMCR8Q8TEV9 937 aaPredicted RBP6.53□□□□□ -1.36
EFR3A-203ENST00000519920 SRCIN1Q9C0H9 1055 aa6.53□□□□□ -1.36
EFR3A-203ENST00000519920 PRKRIP1Q9H875 184 aaPredicted RBP6.53□□□□□ -1.36
EFR3A-203ENST00000519920 HMX1Q9NP08 348 aaPredicted RBP6.53□□□□□ -1.36
EFR3A-203ENST00000519920 LIMD1Q9UGP4 676 aa6.53□□□□□ -1.36
EFR3A-203ENST00000519920 OGDHLQ9ULD0 1010 aa6.53□□□□□ -1.36
EFR3A-203ENST00000519920 LRRFIP2Q9Y608 721 aaKnown RBP6.53□□□□□ -1.36
EFR3A-203ENST00000519920 RPAP1Q9BWH6 1393 aaPredicted RBP6.53□□□□□ -1.36
EFR3A-203ENST00000519920 ZNF646O15015 1829 aaPredicted RBP6.53□□□□□ -1.36
EFR3A-203ENST00000519920 CDC14CA4D256 554 aa6.52□□□□□ -1.37
EFR3A-203ENST00000519920 TRIM75PA6NK02 468 aa6.52□□□□□ -1.37
EFR3A-203ENST00000519920 IGHA1P01876 353 aa6.52□□□□□ -1.37
EFR3A-203ENST00000519920 HMGCRP04035 888 aa6.52□□□□□ -1.37
EFR3A-203ENST00000519920 NBPF7P0C2Y1 421 aaPredicted RBP6.52□□□□□ -1.37
EFR3A-203ENST00000519920 ZEB1P37275 1124 aaPredicted RBP6.52□□□□□ -1.37
EFR3A-203ENST00000519920 EXOSC9Q06265 439 aaKnown RBP6.52□□□□□ -1.37
EFR3A-203ENST00000519920 TUSC1Q2TAM9 212 aa6.52□□□□□ -1.37
EFR3A-203ENST00000519920 VWA5B2Q8N398 1253 aa6.52□□□□□ -1.37
EFR3A-203ENST00000519920 KLHDC4Q8TBB5 520 aa6.52□□□□□ -1.37
EFR3A-203ENST00000519920 GPKOWQ92917 476 aaPredicted RBP eCLIP6.52□□□□□ -1.37
EFR3A-203ENST00000519920 GUCD1Q96NT3 240 aa6.52□□□□□ -1.37
EFR3A-203ENST00000519920 BICC1Q9H694 974 aaKnown RBP6.52□□□□□ -1.37
EFR3A-203ENST00000519920 LILRB3O75022 631 aa6.51□□□□□ -1.37
EFR3A-203ENST00000519920 ENTPD3O75355 529 aa6.51□□□□□ -1.37
EFR3A-203ENST00000519920 LDHBP07195 334 aaKnown RBP6.51□□□□□ -1.37
EFR3A-203ENST00000519920 GCLCP48506 637 aaPredicted RBP6.51□□□□□ -1.37
EFR3A-203ENST00000519920 RGS3P49796 1198 aa6.51□□□□□ -1.37
EFR3A-203ENST00000519920 PUM3Q15397 648 aaKnown RBP6.51□□□□□ -1.37
EFR3A-203ENST00000519920 FAM110CQ1W6H9 321 aa6.51□□□□□ -1.37
EFR3A-203ENST00000519920 RABL6Q3YEC7 729 aaPredicted RBP6.51□□□□□ -1.37
EFR3A-203ENST00000519920 TREML2Q5T2D2 321 aa6.51□□□□□ -1.37
EFR3A-203ENST00000519920 MYSM1Q5VVJ2 828 aa6.51□□□□□ -1.37
EFR3A-203ENST00000519920 KANK3Q6NY19 840 aa6.51□□□□□ -1.37
EFR3A-203ENST00000519920 SV2AQ7L0J3 742 aa6.51□□□□□ -1.37
EFR3A-203ENST00000519920 WDR63Q8IWG1 891 aa6.51□□□□□ -1.37
EFR3A-203ENST00000519920 ZSCAN29Q8IWY8 852 aaPredicted RBP6.51□□□□□ -1.37
EFR3A-203ENST00000519920 ANKRD44Q8N8A2 993 aa6.51□□□□□ -1.37
EFR3A-203ENST00000519920 LPIN2Q92539 896 aa6.51□□□□□ -1.37
EFR3A-203ENST00000519920 ARID3AQ99856 593 aa6.51□□□□□ -1.37
EFR3A-203ENST00000519920 IDI2Q9BXS1 227 aa6.51□□□□□ -1.37
EFR3A-203ENST00000519920 PRDM6Q9NQX0 595 aa6.51□□□□□ -1.37
EFR3A-203ENST00000519920 AGTPBP1Q9UPW5 1226 aa6.51□□□□□ -1.37
EFR3A-203ENST00000519920 UTYO14607 1347 aa6.5□□□□□ -1.37
EFR3A-203ENST00000519920 KIF16BQ96L93 1317 aa6.5□□□□□ -1.37
EFR3A-203ENST00000519920 DDTLA6NHG4 134 aaPredicted RBP6.5□□□□□ -1.37
EFR3A-203ENST00000519920 EYA2O00167 538 aa6.5□□□□□ -1.37
EFR3A-203ENST00000519920 TRIM66O15016 1216 aa6.5□□□□□ -1.37
EFR3A-203ENST00000519920 COL6A1P12109 1028 aa6.5□□□□□ -1.37
EFR3A-203ENST00000519920 SLC5A1P13866 664 aa6.5□□□□□ -1.37
EFR3A-203ENST00000519920 CYP2B6P20813 491 aa6.5□□□□□ -1.37
EFR3A-203ENST00000519920 PRDX5P30044 214 aa6.5□□□□□ -1.37
EFR3A-203ENST00000519920 CTSOP43234 321 aaPredicted RBP6.5□□□□□ -1.37
EFR3A-203ENST00000519920 MARSP56192 900 aaKnown RBP6.5□□□□□ -1.37
EFR3A-203ENST00000519920 FOXK2Q01167 660 aa6.5□□□□□ -1.37
EFR3A-203ENST00000519920 PDE4DQ08499 809 aa6.5□□□□□ -1.37
EFR3A-203ENST00000519920 SPP2Q13103 211 aa6.5□□□□□ -1.37
EFR3A-203ENST00000519920 CCDC84Q86UT8 332 aaPredicted RBP6.5□□□□□ -1.37
EFR3A-203ENST00000519920 PROCA1Q8NCQ7 364 aaPredicted RBP6.5□□□□□ -1.37
EFR3A-203ENST00000519920 FAM161BQ96MY7 647 aa6.5□□□□□ -1.37
EFR3A-203ENST00000519920 GNL3LQ9NVN8 582 aaKnown RBP6.5□□□□□ -1.37
EFR3A-203ENST00000519920 NCOR1O75376 2440 aa6.5□□□□□ -1.37
EFR3A-203ENST00000519920 ZSWIM8A7E2V4 1837 aa6.5□□□□□ -1.37
EFR3A-203ENST00000519920 PFASO15067 1338 aa6.5□□□□□ -1.37
EFR3A-203ENST00000519920 FANCIQ9NVI1 1328 aa6.5□□□□□ -1.37
EFR3A-203ENST00000519920 ATRNL1Q5VV63 1379 aa6.49□□□□□ -1.37
EFR3A-203ENST00000519920 XRCC5P13010 732 aaKnown RBP6.49□□□□□ -1.37
EFR3A-203ENST00000519920 CACNB2Q08289 660 aaPredicted RBP6.49□□□□□ -1.37
EFR3A-203ENST00000519920 PABPC4Q13310 644 aaKnown RBP eCLIP6.49□□□□□ -1.37
EFR3A-203ENST00000519920 LRRC26Q2I0M4 334 aa6.49□□□□□ -1.37
EFR3A-203ENST00000519920 MAP3K21Q5TCX8 1036 aa6.49□□□□□ -1.37
EFR3A-203ENST00000519920 ZNF280CQ8ND82 737 aa6.49□□□□□ -1.37
EFR3A-203ENST00000519920 TRIB2Q92519 343 aa6.49□□□□□ -1.37
EFR3A-203ENST00000519920 SCARF2Q96GP6 870 aaPredicted RBP6.49□□□□□ -1.37
EFR3A-203ENST00000519920 KCTD15Q96SI1 283 aaPredicted RBP6.49□□□□□ -1.37
EFR3A-203ENST00000519920 P2RX7Q99572 595 aaKnown RBP6.49□□□□□ -1.37
EFR3A-203ENST00000519920 CDX2Q99626 313 aaPredicted RBP6.49□□□□□ -1.37
EFR3A-203ENST00000519920 LBHD1Q9BQE6 289 aaPredicted RBP6.49□□□□□ -1.37
EFR3A-203ENST00000519920 ASCC2Q9H1I8 757 aaPredicted RBP6.49□□□□□ -1.37
EFR3A-203ENST00000519920 SEMA6BQ9H3T3 888 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms