RNA–Protein interactions for RNA: ENST00000519386.5

MRPS28-205, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-205ENST00000519386 PLIN4Q96Q06 1357 aa8.41□□□□□ -1.06
MRPS28-205ENST00000519386 FAM196BA6NMK8 535 aa8.41□□□□□ -1.06
MRPS28-205ENST00000519386 UBE2Q2LH0YL09 131 aa8.41□□□□□ -1.06
MRPS28-205ENST00000519386 CPLX1O14810 134 aa8.41□□□□□ -1.06
MRPS28-205ENST00000519386 KDM4AO75164 1064 aa8.41□□□□□ -1.06
MRPS28-205ENST00000519386 USP2O75604 605 aaPredicted RBP8.41□□□□□ -1.06
MRPS28-205ENST00000519386 CALM1P0DP23 149 aa8.41□□□□□ -1.06
MRPS28-205ENST00000519386 CALM2P0DP24 149 aa8.41□□□□□ -1.06
MRPS28-205ENST00000519386 CALM3P0DP25 149 aa8.41□□□□□ -1.06
MRPS28-205ENST00000519386 KRT85P78386 507 aa8.41□□□□□ -1.06
MRPS28-205ENST00000519386 PDE4BQ07343 736 aa8.41□□□□□ -1.06
MRPS28-205ENST00000519386 CCDC178Q5BJE1 867 aa8.41□□□□□ -1.06
MRPS28-205ENST00000519386 TMEM67Q5HYA8 995 aa8.41□□□□□ -1.06
MRPS28-205ENST00000519386 DCAF15Q66K64 600 aa8.41□□□□□ -1.06
MRPS28-205ENST00000519386 CTR9Q6PD62 1173 aa8.41□□□□□ -1.06
MRPS28-205ENST00000519386 CYB5R4Q7L1T6 521 aa8.41□□□□□ -1.06
MRPS28-205ENST00000519386 MIGA2Q7L4E1 593 aa8.41□□□□□ -1.06
MRPS28-205ENST00000519386 ARMC9Q7Z3E5 817 aa8.41□□□□□ -1.06
MRPS28-205ENST00000519386 IQCA1Q86XH1 822 aa8.41□□□□□ -1.06
MRPS28-205ENST00000519386 FAM184AQ8NB25 1140 aa8.41□□□□□ -1.06
MRPS28-205ENST00000519386 RNF166Q96A37 237 aaPredicted RBP8.41□□□□□ -1.06
MRPS28-205ENST00000519386 SYAP1Q96A49 352 aaPredicted RBP8.41□□□□□ -1.06
MRPS28-205ENST00000519386 UBAC1Q9BSL1 405 aa8.41□□□□□ -1.06
MRPS28-205ENST00000519386 ZBED2Q9BTP6 218 aa8.41□□□□□ -1.06
MRPS28-205ENST00000519386 LRRC2Q9BYS8 371 aa8.41□□□□□ -1.06
MRPS28-205ENST00000519386 SCAND2PQ9GZW5 306 aaPredicted RBP8.41□□□□□ -1.06
MRPS28-205ENST00000519386 ZNF287Q9HBT7 754 aa8.41□□□□□ -1.06
MRPS28-205ENST00000519386 ZSWIM5Q9P217 1185 aa8.41□□□□□ -1.06
MRPS28-205ENST00000519386 DDX49Q9Y6V7 483 aaKnown RBP8.41□□□□□ -1.06
MRPS28-205ENST00000519386 VPS37CA5D8V6 355 aaPredicted RBP8.4□□□□□ -1.06
MRPS28-205ENST00000519386 RASSF10A6NK89 507 aa8.4□□□□□ -1.06
MRPS28-205ENST00000519386 PPP1R3GB7ZBB8 358 aa8.4□□□□□ -1.06
MRPS28-205ENST00000519386 IFIT3O14879 490 aaKnown RBP8.4□□□□□ -1.06
MRPS28-205ENST00000519386 ZBTB43O43298 467 aa8.4□□□□□ -1.06
MRPS28-205ENST00000519386 PPP1R12BO60237 982 aaPredicted RBP8.4□□□□□ -1.06
MRPS28-205ENST00000519386 DDAH1O94760 285 aa8.4□□□□□ -1.06
MRPS28-205ENST00000519386 CTDNEP1O95476 244 aa8.4□□□□□ -1.06
MRPS28-205ENST00000519386 CYP2D6P10635 497 aa8.4□□□□□ -1.06
MRPS28-205ENST00000519386 IREB2P48200 963 aaKnown RBP8.4□□□□□ -1.06
MRPS28-205ENST00000519386 METAP2P50579 478 aaKnown RBP eCLIP8.4□□□□□ -1.06
MRPS28-205ENST00000519386 CTDSPL2Q05D32 466 aa8.4□□□□□ -1.06
MRPS28-205ENST00000519386 STK3Q13188 491 aa8.4□□□□□ -1.06
MRPS28-205ENST00000519386 WTAPQ15007 396 aa8.4□□□□□ -1.06
MRPS28-205ENST00000519386 SEC23AQ15436 765 aa8.4□□□□□ -1.06
MRPS28-205ENST00000519386 MAP3K11Q16584 847 aa8.4□□□□□ -1.06
MRPS28-205ENST00000519386 DEFB115Q30KQ5 88 aa8.4□□□□□ -1.06
MRPS28-205ENST00000519386 LDLRAD1Q5T700 205 aa8.4□□□□□ -1.06
MRPS28-205ENST00000519386 SYNE3Q6ZMZ3 975 aa8.4□□□□□ -1.06
MRPS28-205ENST00000519386 WASF1Q92558 559 aa8.4□□□□□ -1.06
MRPS28-205ENST00000519386 HOOK2Q96ED9 719 aa8.4□□□□□ -1.06
MRPS28-205ENST00000519386 CLMNQ96JQ2 1002 aa8.4□□□□□ -1.06
MRPS28-205ENST00000519386 MCM9Q9NXL9 1143 aa8.4□□□□□ -1.06
MRPS28-205ENST00000519386 BRPF3Q9ULD4 1205 aa8.4□□□□□ -1.06
MRPS28-205ENST00000519386 SLC12A7Q9Y666 1083 aa8.4□□□□□ -1.06
MRPS28-205ENST00000519386 TNKSO95271 1327 aa8.39□□□□□ -1.07
MRPS28-205ENST00000519386 CYP2D7A0A087X1C5 515 aa8.39□□□□□ -1.07
MRPS28-205ENST00000519386 CCDC69A6NI79 296 aa8.39□□□□□ -1.07
MRPS28-205ENST00000519386 H3BQV1 296 aa8.39□□□□□ -1.07
MRPS28-205ENST00000519386 JAK2O60674 1132 aa8.39□□□□□ -1.07
MRPS28-205ENST00000519386 POLR3DP05423 398 aaPredicted RBP8.39□□□□□ -1.07
MRPS28-205ENST00000519386 HLA-DOAP06340 250 aa8.39□□□□□ -1.07
MRPS28-205ENST00000519386 IFNAR1P17181 557 aa8.39□□□□□ -1.07
MRPS28-205ENST00000519386 NCLP19338 710 aaKnown RBP8.39□□□□□ -1.07
MRPS28-205ENST00000519386 COL9A1P20849 921 aa8.39□□□□□ -1.07
MRPS28-205ENST00000519386 INPP5BP32019 993 aa8.39□□□□□ -1.07
MRPS28-205ENST00000519386 UBE2HP62256 183 aa8.39□□□□□ -1.07
MRPS28-205ENST00000519386 GRM1Q13255 1194 aa8.39□□□□□ -1.07
MRPS28-205ENST00000519386 C6orf132Q5T0Z8 1188 aa8.39□□□□□ -1.07
MRPS28-205ENST00000519386 L1TD1Q5T7N2 865 aaKnown RBP8.39□□□□□ -1.07
MRPS28-205ENST00000519386 IFFO2Q5TF58 517 aa8.39□□□□□ -1.07
MRPS28-205ENST00000519386 C12orf60Q5U649 245 aa8.39□□□□□ -1.07
MRPS28-205ENST00000519386 CYP4F22Q6NT55 531 aa8.39□□□□□ -1.07
MRPS28-205ENST00000519386 RGMBQ6NW40 437 aa8.39□□□□□ -1.07
MRPS28-205ENST00000519386 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.39□□□□□ -1.07
MRPS28-205ENST00000519386 BRAPQ7Z569 592 aa8.39□□□□□ -1.07
MRPS28-205ENST00000519386 FAM177A1Q8N128 213 aaPredicted RBP8.39□□□□□ -1.07
MRPS28-205ENST00000519386 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.39□□□□□ -1.07
MRPS28-205ENST00000519386 KLRG1Q96E93 195 aa8.39□□□□□ -1.07
MRPS28-205ENST00000519386 HHIPL1Q96JK4 782 aa8.39□□□□□ -1.07
MRPS28-205ENST00000519386 WRNIP1Q96S55 665 aa8.39□□□□□ -1.07
MRPS28-205ENST00000519386 MAP3K14Q99558 947 aa8.39□□□□□ -1.07
MRPS28-205ENST00000519386 ZNF341Q9BYN7 854 aa8.39□□□□□ -1.07
MRPS28-205ENST00000519386 DHX36Q9H2U1 1008 aaKnown RBP8.39□□□□□ -1.07
MRPS28-205ENST00000519386 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.39□□□□□ -1.07
MRPS28-205ENST00000519386 RBM28Q9NW13 759 aaKnown RBP8.39□□□□□ -1.07
MRPS28-205ENST00000519386 RBM27Q9P2N5 1060 aaKnown RBP8.39□□□□□ -1.07
MRPS28-205ENST00000519386 PI4KBQ9UBF8 816 aa8.39□□□□□ -1.07
MRPS28-205ENST00000519386 FSD2A1L4K1 749 aa8.38□□□□□ -1.07
MRPS28-205ENST00000519386 GOLGA8AA7E2F4 631 aa8.38□□□□□ -1.07
MRPS28-205ENST00000519386 PHF20L1A8MW92 1017 aa8.38□□□□□ -1.07
MRPS28-205ENST00000519386 USP17L12C9JPN9 530 aa8.38□□□□□ -1.07
MRPS28-205ENST00000519386 USP17L21D6R901 530 aa8.38□□□□□ -1.07
MRPS28-205ENST00000519386 SMIM22K7EJ46 135 aa8.38□□□□□ -1.07
MRPS28-205ENST00000519386 VEGFBP49765 207 aa8.38□□□□□ -1.07
MRPS28-205ENST00000519386 PLCD1P51178 756 aa8.38□□□□□ -1.07
MRPS28-205ENST00000519386 ZNF157P51786 506 aaPredicted RBP8.38□□□□□ -1.07
MRPS28-205ENST00000519386 ZNF445P59923 1031 aa8.38□□□□□ -1.07
MRPS28-205ENST00000519386 MAP3K10Q02779 954 aa8.38□□□□□ -1.07
MRPS28-205ENST00000519386 RESTQ13127 1097 aa8.38□□□□□ -1.07
MRPS28-205ENST00000519386 VGLL4Q14135 290 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms